RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 SGCZQ96LD1 299 aa5.02□□□□□ -1.61
CDC42BPA-207ENST00000441725 HSPA12BQ96MM6 686 aa5.02□□□□□ -1.61
CDC42BPA-207ENST00000441725 B3GNT5Q9BYG0 378 aa5.02□□□□□ -1.61
CDC42BPA-207ENST00000441725 TMEM60Q9H2L4 133 aa5.02□□□□□ -1.61
CDC42BPA-207ENST00000441725 KCNH7Q9NS40 1196 aa5.02□□□□□ -1.61
CDC42BPA-207ENST00000441725 USP36Q9P275 1121 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-207ENST00000441725 LZTS1Q9Y250 596 aa5.02□□□□□ -1.61
CDC42BPA-207ENST00000441725 FAM170BA6NMN3 283 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 H3BML4 177 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 DGKIO75912 1065 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 LPLP06858 475 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 RPL10P27635 214 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 CHRNA4P43681 627 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 UGT8Q16880 541 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 PGS1Q32NB8 556 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 PITRM1Q5JRX3 1037 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 CCDC62Q6P9F0 684 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 WAPLQ7Z5K2 1190 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 CD163Q86VB7 1156 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 DENND1CQ8IV53 801 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 SMAP1Q8IYB5 467 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 FAM181AQ8N9Y4 354 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 UHMK1Q8TAS1 419 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 PLEKHO2Q8TD55 490 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 TBCBQ99426 244 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 POFUT1Q9H488 388 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 SLC6A20Q9NP91 592 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 FBLN5Q9UBX5 448 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 RWDD3Q9Y3V2 267 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 ATP23Q9Y6H3 246 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 C1QTNF9BB2RNN3 333 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 UBXN7O94888 489 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 FUCA1P04066 466 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 ALDH2P05091 517 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 TYRP1P17643 537 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 OXCT1P55809 520 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 FAM193AP78312 1265 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 ALDH6A1Q02252 535 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 TEKQ02763 1124 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 MBTPS1Q14703 1052 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 CYP27C1Q4G0S4 372 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 ZBTB41Q5SVQ8 909 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 FTSJ3Q8IY81 847 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 THEMISQ8N1K5 641 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 C1GALT1C1Q96EU7 318 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 FCRL2Q96LA5 508 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 CCDC138Q96M89 665 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 SCLT1Q96NL6 688 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 LRFN3Q9BTN0 628 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 CHMP4BQ9H444 224 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 PRDM12Q9H4Q4 367 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 TELO2Q9Y4R8 837 aa5.01□□□□□ -1.61
CDC42BPA-207ENST00000441725 FAM90A27PA6NNH2 459 aa5□□□□□ -1.61
CDC42BPA-207ENST00000441725 C9orf172C9J069 976 aa5□□□□□ -1.61
CDC42BPA-207ENST00000441725 ELL2O00472 640 aaPredicted RBP5□□□□□ -1.61
CDC42BPA-207ENST00000441725 B3GALT2O43825 422 aa5□□□□□ -1.61
CDC42BPA-207ENST00000441725 TRIM14Q14142 442 aa5□□□□□ -1.61
CDC42BPA-207ENST00000441725 EPHA7Q15375 998 aa5□□□□□ -1.61
CDC42BPA-207ENST00000441725 NPNTQ6UXI9 565 aa5□□□□□ -1.61
CDC42BPA-207ENST00000441725 KCTD1Q719H9 257 aa5□□□□□ -1.61
CDC42BPA-207ENST00000441725 COL23A1Q86Y22 540 aaPredicted RBP5□□□□□ -1.61
CDC42BPA-207ENST00000441725 ACRBPQ8NEB7 543 aa5□□□□□ -1.61
CDC42BPA-207ENST00000441725 RIN2Q8WYP3 895 aaPredicted RBP5□□□□□ -1.61
CDC42BPA-207ENST00000441725 RTEL1Q9NZ71 1219 aa5□□□□□ -1.61
CDC42BPA-207ENST00000441725 L1RE1Q9UN81 338 aa5□□□□□ -1.61
CDC42BPA-207ENST00000441725 COA3Q9Y2R0 106 aaPredicted RBP5□□□□□ -1.61
CDC42BPA-207ENST00000441725 HMX2A2RU54 273 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 DHX15O43143 795 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 ENDOUP21128 410 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 PEX2P28328 305 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 SARSP49591 514 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 ADGRE1Q14246 886 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 HLA-DQA1Q5Y7H0 255 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 SWSAP1Q6NVH7 229 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 KIAA0319LQ8IZA0 1049 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 NLGN4XQ8N0W4 816 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 FBXL6Q8N531 539 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 PGBD4Q96DM1 585 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 FAM83CQ9BQN1 747 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 CRB3Q9BUF7 120 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 ANAPC4Q9UJX5 808 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 PRSS38A1L453 326 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 BUB1BO60566 1050 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 PTPN1P18031 435 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 FNTBP49356 437 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 MRPS9P82933 396 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 EGR3Q06889 387 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 TUSC3Q13454 348 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 GLIPR1L2Q4G1C9 344 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 MBNL2Q5VZF2 373 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 DARS2Q6PI48 645 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 CREG2Q8IUH2 290 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 CLEC10AQ8IUN9 316 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 C7orf31Q8N865 590 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 ATXN2LQ8WWM7 1075 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 SENP7Q9BQF6 1050 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 SEMA3GQ9NS98 782 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 TRMT13Q9NUP7 481 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms