RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 PLCG1P19174 1290 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 KLRC1P26715 233 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 CDK8P49336 464 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 CDC42EP5Q6NZY7 148 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 EGFL6Q8IUX8 553 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 ANKS4BQ8N8V4 417 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 KIAA0895Q8NCT3 520 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 UBLCP1Q8WVY7 318 aaPredicted RBP12.97□□□□□ -0.33
LTBR-203ENST00000441074 STAMBPL1Q96FJ0 436 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 PBKQ96KB5 322 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 XPO6Q96QU8 1125 aaKnown RBP12.97□□□□□ -0.33
LTBR-203ENST00000441074 EYA3Q99504 573 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 TCP11L1Q9NUJ3 509 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 C15orf41Q9Y2V0 281 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 LTBP1Q14766 1721 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 BRCA1P38398 1863 aaKnown RBP12.97□□□□□ -0.33
LTBR-203ENST00000441074 GOLGA8HP0CJ92 632 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 TSPY3P0CV98 308 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 TSPY8P0CW00 308 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 RASA1P20936 1047 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 AMPD3Q01432 767 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 ITIH4Q14624 930 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 DACT2Q5SW24 774 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 SFMBT2Q5VUG0 894 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 PODNQ7Z5L7 613 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 CABP7Q86V35 215 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 GPIHBP1Q8IV16 184 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 PNMA1Q8ND90 353 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 TLCD1Q96CP7 247 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 CALR3Q96L12 384 aaKnown RBP12.97□□□□□ -0.33
LTBR-203ENST00000441074 PSMD1Q99460 953 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 LZTS2Q9BRK4 669 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 FAM129AQ9BZQ8 928 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 PCDHA6Q9UN73 950 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 SCAF8Q9UPN6 1271 aaKnown RBP12.97□□□□□ -0.33
LTBR-203ENST00000441074 ZBTB12Q9Y330 459 aaPredicted RBP12.97□□□□□ -0.33
LTBR-203ENST00000441074 PCDHA8Q9Y5H6 950 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 MYH1P12882 1939 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 ASAP2O43150 1006 aa12.96□□□□□ -0.33
LTBR-203ENST00000441074 CRKP46108 304 aa12.96□□□□□ -0.33
LTBR-203ENST00000441074 PPARDQ03181 441 aa12.96□□□□□ -0.33
LTBR-203ENST00000441074 ICA1Q05084 483 aa12.96□□□□□ -0.33
LTBR-203ENST00000441074 MYO1EQ12965 1108 aa12.96□□□□□ -0.33
LTBR-203ENST00000441074 ORC2Q13416 577 aaPredicted RBP12.96□□□□□ -0.33
LTBR-203ENST00000441074 RPS6KA1Q15418 735 aa12.96□□□□□ -0.33
LTBR-203ENST00000441074 DDX42Q86XP3 938 aaKnown RBP eCLIP12.96□□□□□ -0.33
LTBR-203ENST00000441074 ACTRT1Q8TDG2 376 aa12.96□□□□□ -0.33
LTBR-203ENST00000441074 GPKOWQ92917 476 aaPredicted RBP eCLIP12.96□□□□□ -0.33
LTBR-203ENST00000441074 FAM163AQ96GL9 167 aaPredicted RBP12.96□□□□□ -0.33
LTBR-203ENST00000441074 NEUROG2Q9H2A3 272 aa12.96□□□□□ -0.33
LTBR-203ENST00000441074 BARHL2Q9NY43 387 aa12.96□□□□□ -0.33
LTBR-203ENST00000441074 CEP72Q9P209 647 aa12.96□□□□□ -0.33
LTBR-203ENST00000441074 KCNG1Q9UIX4 513 aa12.96□□□□□ -0.33
LTBR-203ENST00000441074 PACSIN2Q9UNF0 486 aaPredicted RBP12.96□□□□□ -0.33
LTBR-203ENST00000441074 ROBO3Q96MS0 1386 aa12.96□□□□□ -0.33
LTBR-203ENST00000441074 BTNL10A8MVZ5 291 aa12.96□□□□□ -0.34
LTBR-203ENST00000441074 DCDC2CA8MYV0 355 aa12.96□□□□□ -0.34
LTBR-203ENST00000441074 ANP32DO95626 131 aa12.96□□□□□ -0.34
LTBR-203ENST00000441074 SARNPP82979 210 aaKnown RBP12.96□□□□□ -0.34
LTBR-203ENST00000441074 SLC18A3Q16572 532 aa12.96□□□□□ -0.34
LTBR-203ENST00000441074 KRT71Q3SY84 523 aa12.96□□□□□ -0.34
LTBR-203ENST00000441074 ZNF444Q8N0Y2 327 aaPredicted RBP12.96□□□□□ -0.34
LTBR-203ENST00000441074 ZNF483Q8TF39 744 aaPredicted RBP12.96□□□□□ -0.34
LTBR-203ENST00000441074 ZNF317Q96PQ6 595 aaPredicted RBP12.96□□□□□ -0.34
LTBR-203ENST00000441074 CCDC88AQ3V6T2 1871 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 LRRC37AA6NMS7 1700 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 KCNK3O14649 394 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 SART1O43290 800 aaKnown RBP12.95□□□□□ -0.34
LTBR-203ENST00000441074 TLR2O60603 784 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 OR52Z1P0C646 297 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 GCKP35557 465 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 EIF3BP55884 814 aaKnown RBP12.95□□□□□ -0.34
LTBR-203ENST00000441074 KCNMA1Q12791 1236 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 ZNF268Q14587 947 aaPredicted RBP12.95□□□□□ -0.34
LTBR-203ENST00000441074 CDCA2Q69YH5 1023 aaPredicted RBP12.95□□□□□ -0.34
LTBR-203ENST00000441074 BZW1Q7L1Q6 419 aaKnown RBP12.95□□□□□ -0.34
LTBR-203ENST00000441074 KRT25Q7Z3Z0 450 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 TMC3Q7Z5M5 1100 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 PIGWQ7Z7B1 504 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 LMBR1Q8WVP7 490 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 TEKT1Q969V4 418 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 THOC1Q96FV9 657 aaKnown RBP12.95□□□□□ -0.34
LTBR-203ENST00000441074 L3MBTL3Q96JM7 780 aaPredicted RBP12.95□□□□□ -0.34
LTBR-203ENST00000441074 SPAG5Q96R06 1193 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 TRPC6Q9Y210 931 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 F8VZ95 297 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 STXBP3O00186 592 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 CTNND1O60716 968 aaKnown RBP12.95□□□□□ -0.34
LTBR-203ENST00000441074 KIF4AO95239 1232 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 FLT3P36888 993 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 USP11P51784 963 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 LRRC63Q05C16 580 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 INF2Q27J81 1249 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 KIAA0753Q2KHM9 967 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 SPDYCQ5MJ68 293 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 RASGRP4Q8TDF6 673 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 TCP11Q8WWU5 503 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 SPDL1Q96EA4 605 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 SLC39A2Q9NP94 309 aa12.95□□□□□ -0.34
LTBR-203ENST00000441074 CCDC188H7C350 402 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms