RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 PDXDC2PQ6P474 469 aa6.91□□□□□ -1.3
CNOT1-202ENST00000441024 APOBEC3FQ8IUX4 373 aaKnown RBP6.91□□□□□ -1.3
CNOT1-202ENST00000441024 TTC39CQ8N584 583 aa6.91□□□□□ -1.3
CNOT1-202ENST00000441024 XXYLT1Q8NBI6 393 aa6.91□□□□□ -1.3
CNOT1-202ENST00000441024 PROCA1Q8NCQ7 364 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-202ENST00000441024 BCAS4Q8TDM0 211 aa6.91□□□□□ -1.3
CNOT1-202ENST00000441024 INO80BQ9C086 356 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-202ENST00000441024 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-202ENST00000441024 ANAPC5Q9UJX4 755 aa6.91□□□□□ -1.3
CNOT1-202ENST00000441024 AKT3Q9Y243 479 aa6.91□□□□□ -1.3
CNOT1-202ENST00000441024 A0A087WWV3 80 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 USP17L10C9JJH3 530 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 EVI5O60447 810 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 SUN1O94901 812 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 KRT1P04264 644 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 HOXA13P31271 388 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-202ENST00000441024 TPD52P55327 224 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-202ENST00000441024 RWDD2BP57060 319 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 NFIXQ14938 502 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 MTERF2Q49AM1 385 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 FAM83BQ5T0W9 1011 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 SFR1Q86XK3 245 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 ADGRF4Q8IZF3 695 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 NSUN6Q8TEA1 469 aaKnown RBP6.9□□□□□ -1.3
CNOT1-202ENST00000441024 ARHGEF2Q92974 986 aaKnown RBP6.9□□□□□ -1.3
CNOT1-202ENST00000441024 GJD4Q96KN9 370 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-202ENST00000441024 FAM193BQ96PV7 902 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-202ENST00000441024 RPF1Q9H9Y2 349 aaKnown RBP6.9□□□□□ -1.3
CNOT1-202ENST00000441024 K7ERI5 159 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 MCF2LO15068 1137 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 KIAA0391O15091 583 aaKnown RBP6.9□□□□□ -1.3
CNOT1-202ENST00000441024 AP3M2P53677 418 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 MTMR1Q13613 665 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 EPHA7Q15375 998 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 PADI6Q6TGC4 694 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 HHIPL2Q6UWX4 724 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 ENOSF1Q7L5Y1 443 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 FRMD5Q7Z6J6 570 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 FBXO33Q7Z6M2 555 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 LRRC8CQ8TDW0 803 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 TUBB6Q9BUF5 446 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 NYAP2Q9P242 653 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 DNAJC12Q9UKB3 198 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 ITIH6Q6UXX5 1313 aa6.9□□□□□ -1.3
CNOT1-202ENST00000441024 HMGB1P1B2RPK0 211 aaPredicted RBP6.9□□□□□ -1.31
CNOT1-202ENST00000441024 SLC16A3O15427 465 aaKnown RBP6.9□□□□□ -1.31
CNOT1-202ENST00000441024 ENTPD3O75355 529 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 PCK1P35558 622 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 CLCN6P51797 869 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 CAV1Q03135 178 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 C2orf54Q08AI8 447 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 ASPHQ12797 758 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 TXNRD1Q16881 649 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 QRICH1Q2TAL8 776 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 GPR101Q96P66 508 aaPredicted RBP6.9□□□□□ -1.31
CNOT1-202ENST00000441024 MSTO1Q9BUK6 570 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 GJB4Q9NTQ9 266 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 INTS9Q9NV88 658 aaKnown RBP6.9□□□□□ -1.31
CNOT1-202ENST00000441024 USH1CQ9Y6N9 552 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 NTSR2O95665 410 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 FTCDO95954 541 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 PRR29P0C7W0 189 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 EIF2AK2P19525 551 aaKnown RBP6.9□□□□□ -1.31
CNOT1-202ENST00000441024 GPR162Q16538 588 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 ARHGEF18Q6ZSZ5 1173 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 BZW1Q7L1Q6 419 aaKnown RBP6.9□□□□□ -1.31
CNOT1-202ENST00000441024 CCDC197Q8NCU1 140 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 C7orf25Q9BPX7 421 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 C2orf40Q9H1Z8 148 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 PFDN4Q9NQP4 134 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 TUBE1Q9UJT0 475 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 SERPINA10Q9UK55 444 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 SYNGAP1Q96PV0 1343 aa6.9□□□□□ -1.31
CNOT1-202ENST00000441024 KDM6AO15550 1401 aaPredicted RBP6.9□□□□□ -1.31
CNOT1-202ENST00000441024 F5H6K3 240 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 SGK1O00141 431 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 RGL2O15211 777 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 NMT2O60551 498 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 ZNF189O75820 626 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-202ENST00000441024 EYA4O95677 639 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 INHBAP08476 426 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 MYBL1P10243 752 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 SLC8A1P32418 973 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 IGBP1P78318 339 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 DR1Q01658 176 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 GABPAQ06546 454 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 KLRC3Q07444 240 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 FAM47CQ5HY64 1035 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 C6orf118Q5T5N4 469 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 STRIP1Q5VSL9 837 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 PNMA8AQ86V59 439 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-202ENST00000441024 BBS5Q8N3I7 341 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 SRBD1Q8N5C6 995 aaKnown RBP6.89□□□□□ -1.31
CNOT1-202ENST00000441024 PRPF38AQ8NAV1 312 aaKnown RBP6.89□□□□□ -1.31
CNOT1-202ENST00000441024 MGARPQ8TDB4 240 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 RILPQ96NA2 401 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 ITGB4P16144 1822 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 POTEMA6NI47 508 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 PDXKO00764 312 aa6.89□□□□□ -1.31
CNOT1-202ENST00000441024 LRRN2O75325 713 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms