RNA–Protein interactions for RNA: ENST00000440978.1

EBF3-203, Transcript of early B cell factor 3, humanhuman

TSL 3

Gene EBF3, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-203ENST00000440978 ANKEF1Q9NU02 776 aa13.35□□□□□ -0.27
EBF3-203ENST00000440978 WRAP73Q9P2S5 460 aaPredicted RBP13.35□□□□□ -0.27
EBF3-203ENST00000440978 TFIP11Q9UBB9 837 aaKnown RBP13.35□□□□□ -0.27
EBF3-203ENST00000440978 FBXO2Q9UK22 296 aaPredicted RBP13.35□□□□□ -0.27
EBF3-203ENST00000440978 KDM3AQ9Y4C1 1321 aa13.35□□□□□ -0.27
EBF3-203ENST00000440978 KAT6AQ92794 2004 aa13.34□□□□□ -0.27
EBF3-203ENST00000440978 SMIM35A0A1B0GVV1 85 aa13.34□□□□□ -0.27
EBF3-203ENST00000440978 TRIM43BA6NCK2 446 aa13.34□□□□□ -0.27
EBF3-203ENST00000440978 MED24O75448 989 aa13.34□□□□□ -0.27
EBF3-203ENST00000440978 TIMP1P01033 207 aa13.34□□□□□ -0.27
EBF3-203ENST00000440978 CYP2C9P11712 490 aa13.34□□□□□ -0.27
EBF3-203ENST00000440978 RAG1P15918 1043 aa13.34□□□□□ -0.27
EBF3-203ENST00000440978 MARCKSP29966 332 aaPredicted RBP13.34□□□□□ -0.27
EBF3-203ENST00000440978 CCT6AP40227 531 aaKnown RBP13.34□□□□□ -0.27
EBF3-203ENST00000440978 ZNF200P98182 395 aaPredicted RBP13.34□□□□□ -0.27
EBF3-203ENST00000440978 TARBP2Q15633 366 aaKnown RBP13.34□□□□□ -0.27
EBF3-203ENST00000440978 FOXD4L6Q3SYB3 417 aaPredicted RBP13.34□□□□□ -0.27
EBF3-203ENST00000440978 MTHFD1LQ6UB35 978 aa13.34□□□□□ -0.27
EBF3-203ENST00000440978 FOXD4L3Q6VB84 417 aaPredicted RBP13.34□□□□□ -0.27
EBF3-203ENST00000440978 RSPH3Q86UC2 560 aa13.34□□□□□ -0.27
EBF3-203ENST00000440978 RETREG2Q8NC44 543 aa13.34□□□□□ -0.27
EBF3-203ENST00000440978 TRIM43Q96BQ3 446 aaPredicted RBP13.34□□□□□ -0.27
EBF3-203ENST00000440978 IPO9Q96P70 1041 aaKnown RBP13.34□□□□□ -0.27
EBF3-203ENST00000440978 NOC4LQ9BVI4 516 aaKnown RBP13.34□□□□□ -0.27
EBF3-203ENST00000440978 NT5C3AQ9H0P0 336 aa13.34□□□□□ -0.27
EBF3-203ENST00000440978 HIPK3Q9H422 1215 aa13.34□□□□□ -0.27
EBF3-203ENST00000440978 PCDHA2Q9Y5H9 948 aa13.34□□□□□ -0.27
EBF3-203ENST00000440978 PARNO95453 639 aaKnown RBP13.33□□□□□ -0.28
EBF3-203ENST00000440978 C22orf31O95567 290 aa13.33□□□□□ -0.28
EBF3-203ENST00000440978 KLRC1P26715 233 aa13.33□□□□□ -0.28
EBF3-203ENST00000440978 RFC5P40937 340 aa13.33□□□□□ -0.28
EBF3-203ENST00000440978 UBA7P41226 1012 aa13.33□□□□□ -0.28
EBF3-203ENST00000440978 TBC1D8BQ0IIM8 1120 aa13.33□□□□□ -0.28
EBF3-203ENST00000440978 TRIM71Q2Q1W2 868 aaKnown RBP13.33□□□□□ -0.28
EBF3-203ENST00000440978 MTERF2Q49AM1 385 aa13.33□□□□□ -0.28
EBF3-203ENST00000440978 HYIQ5T013 277 aa13.33□□□□□ -0.28
EBF3-203ENST00000440978 TRMT1LQ7Z2T5 733 aaKnown RBP13.33□□□□□ -0.28
EBF3-203ENST00000440978 SH3RF1Q7Z6J0 888 aa13.33□□□□□ -0.28
EBF3-203ENST00000440978 NME8Q8N427 588 aa13.33□□□□□ -0.28
EBF3-203ENST00000440978 TRAPPC12Q8WVT3 735 aa13.33□□□□□ -0.28
EBF3-203ENST00000440978 DHX38Q92620 1227 aaKnown RBP13.33□□□□□ -0.28
EBF3-203ENST00000440978 CEP170P1Q96L14 293 aa13.33□□□□□ -0.28
EBF3-203ENST00000440978 CCDC43Q96MW1 224 aaKnown RBP13.33□□□□□ -0.28
EBF3-203ENST00000440978 SCAND2PQ9GZW5 306 aaPredicted RBP13.33□□□□□ -0.28
EBF3-203ENST00000440978 CSRNP2Q9H175 543 aa13.33□□□□□ -0.28
EBF3-203ENST00000440978 CYP26B1Q9NR63 512 aa13.33□□□□□ -0.28
EBF3-203ENST00000440978 CHMP5Q9NZZ3 219 aa13.33□□□□□ -0.28
EBF3-203ENST00000440978 DBR1Q9UK59 544 aaKnown RBP13.33□□□□□ -0.28
EBF3-203ENST00000440978 RCOR1Q9UKL0 485 aa13.33□□□□□ -0.28
EBF3-203ENST00000440978 PP2D1A8MPX8 630 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 GAS2O43903 313 aaKnown RBP13.32□□□□□ -0.28
EBF3-203ENST00000440978 CUTAO60888 179 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 MAFO75444 373 aaPredicted RBP13.32□□□□□ -0.28
EBF3-203ENST00000440978 SELPP16109 830 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 NCLP19338 710 aaKnown RBP13.32□□□□□ -0.28
EBF3-203ENST00000440978 TMOD1P28289 359 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 TXLNAP40222 546 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 XKR9Q5GH70 373 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 MFSD5Q6N075 450 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 POTEGQ6S5H5 508 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 CABP7Q86V35 215 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 ZNF710Q8N1W2 664 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 TMEM199Q8N511 208 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 ZNF579Q8NAF0 562 aaKnown RBP13.32□□□□□ -0.28
EBF3-203ENST00000440978 SLC7A3Q8WY07 619 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 CALML4Q96GE6 196 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 CDK5RAP3Q96JB5 506 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 CEP89Q96ST8 783 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 MMTAG2Q9BU76 263 aaKnown RBP13.32□□□□□ -0.28
EBF3-203ENST00000440978 PPP1R12CQ9BZL4 782 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 ZMYND8Q9ULU4 1186 aaPredicted RBP13.32□□□□□ -0.28
EBF3-203ENST00000440978 KIAA1024Q9UPX6 916 aa13.32□□□□□ -0.28
EBF3-203ENST00000440978 PDE4DIPQ5VU43 2346 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 IGKV6-21A0A0C4DH24 114 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 DGAT1O75907 488 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 CKBP12277 381 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 SYN1P17600 705 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 CDC25AP30304 524 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 RFC2P35250 354 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 THPOP40225 353 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 RARRES1P49788 294 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 DNM2P50570 870 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 POLGP54098 1239 aaPredicted RBP13.31□□□□□ -0.28
EBF3-203ENST00000440978 NPEPPSP55786 919 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 GRIN1Q05586 938 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 PLA2G4FQ68DD2 849 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 RUFY4Q6ZNE9 571 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 LINC01465Q8N7H1 131 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 PIGOQ8TEQ8 1089 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 SPATA32Q96LK8 384 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 LBHD1Q9BQE6 289 aaPredicted RBP13.31□□□□□ -0.28
EBF3-203ENST00000440978 CCSER1Q9C0I3 900 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 DHX33Q9H6R0 707 aaKnown RBP13.31□□□□□ -0.28
EBF3-203ENST00000440978 DDX19AQ9NUU7 478 aaKnown RBP13.31□□□□□ -0.28
EBF3-203ENST00000440978 DNM3Q9UQ16 869 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 LTBP2Q14767 1821 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 LOXHD1Q8IVV2 1947 aa13.31□□□□□ -0.28
EBF3-203ENST00000440978 TRIP12Q14669 1992 aaPredicted RBP13.31□□□□□ -0.28
EBF3-203ENST00000440978 ARID2Q68CP9 1835 aa13.3□□□□□ -0.28
EBF3-203ENST00000440978 TANC1Q9C0D5 1861 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms