RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 MREGQ8N565 214 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 RBM46Q8TBY0 533 aaKnown RBP13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 ARMCX3Q9UH62 379 aaPredicted RBP13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 SWAP70Q9UH65 585 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 AMFRQ9UKV5 643 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 PCNTO95613 3336 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 GNAQP50148 359 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 ALDH5A1P51649 535 aaPredicted RBP13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 GALCP54803 685 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 GNPTABQ3T906 1256 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 WLSQ5T9L3 541 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 CUEDC2Q9H467 287 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 CTNNAL1Q9UBT7 734 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 C1orf167Q5SNV9 1468 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 ECM29Q5VYK3 1845 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 LAMB4A4D0S4 1761 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 USP17L15C9J2P7 530 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 USP17L13C9JLJ4 530 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 USP17L11C9JVI0 530 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 USP17L18D6R9N7 530 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 USP17L22D6RA61 530 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 USP17L17D6RBQ6 530 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 USP17L19D6RCP7 530 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 USP17L20D6RJB6 530 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 MPHOSPH10O00566 681 aaKnown RBP13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 PMS2P54278 862 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 USP17L24Q0WX57 530 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 HP1BP3Q5SSJ5 553 aaPredicted RBP13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 USP17L6PQ6QN14 398 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 CCDC50Q8IVM0 306 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 FAM118BQ9BPY3 351 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 RAB34Q9BZG1 259 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 ARHGEF10LQ9HCE6 1279 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 FLOT1O75955 427 aa13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 TAL1P17542 331 aaPredicted RBP13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 CRKLP46109 303 aaKnown RBP13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 MTMR3Q13615 1198 aa13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 GRM4Q14833 912 aa13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 NEK9Q8TD19 979 aa13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 SCFD2Q8WU76 684 aa13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 LMBR1Q8WVP7 490 aa13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 RNF25Q96BH1 459 aaPredicted RBP13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 CEP95Q96GE4 821 aa13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 A1CFQ9NQ94 594 aaKnown RBP13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 GCNT4Q9P109 453 aa13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 KCNG1Q9UIX4 513 aa13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 NUP188Q5SRE5 1749 aa13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 BCL9LQ86UU0 1499 aa13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 M0R2N6 131 aa13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 XRCC5P13010 732 aaKnown RBP13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 THEMIS2Q5TEJ8 643 aa13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 FMNL3Q8IVF7 1028 aa13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 SLC35G2Q8TBE7 412 aa13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 DDX25Q9UHL0 483 aaKnown RBP13.47□□□□□ -0.25
SLC38A1-202ENST00000439706 RSPH10B2B2RC85 870 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 ATMINO43313 823 aaPredicted RBP13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 RSPH10BP0C881 870 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 MARCKSL1P49006 195 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 SARNPP82979 210 aaKnown RBP13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 ERMARDQ5T6L9 678 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 TTBK2Q6IQ55 1244 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 VPS36Q86VN1 386 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 CCDC105Q8IYK2 499 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 SCFD1Q8WVM8 642 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 PWWP2AQ96N64 755 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 MXD3Q9BW11 206 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 ZCWPW1Q9H0M4 648 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 ATP8A2Q9NTI2 1148 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 TAS2R14Q9NYV8 317 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 PPIP5K2O43314 1243 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 CLSTN1O94985 981 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 GH1P01241 217 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 KRT16P08779 473 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 PLA2G4BP0C869 781 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 PSMC6P62333 389 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 XRCC4Q13426 336 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 PLCB4Q15147 1175 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 LRIG3Q6UXM1 1119 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 IRF2BP2Q7Z5L9 587 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 CPNE8Q86YQ8 564 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 CTNNBL1Q8WYA6 563 aaPredicted RBP13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 PBKQ96KB5 322 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 BTBD6Q96KE9 485 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 FAM129AQ9BZQ8 928 aa13.46□□□□□ -0.25
SLC38A1-202ENST00000439706 MESDQ14696 234 aa13.46□□□□□ -0.26
SLC38A1-202ENST00000439706 CRYMQ14894 314 aa13.46□□□□□ -0.26
SLC38A1-202ENST00000439706 HOOK3Q86VS8 718 aa13.46□□□□□ -0.26
SLC38A1-202ENST00000439706 DGKHQ86XP1 1220 aa13.46□□□□□ -0.26
SLC38A1-202ENST00000439706 CCDC65Q8IXS2 484 aa13.46□□□□□ -0.26
SLC38A1-202ENST00000439706 PARD3BQ8TEW8 1205 aa13.46□□□□□ -0.26
SLC38A1-202ENST00000439706 DDX23Q9BUQ8 820 aaKnown RBP13.46□□□□□ -0.26
SLC38A1-202ENST00000439706 MYH7P12883 1935 aa13.46□□□□□ -0.26
SLC38A1-202ENST00000439706 LAD1O00515 517 aa13.45□□□□□ -0.26
SLC38A1-202ENST00000439706 C21orf2O43822 256 aa13.45□□□□□ -0.26
SLC38A1-202ENST00000439706 MGRN1O60291 552 aa13.45□□□□□ -0.26
SLC38A1-202ENST00000439706 GCNT3O95395 438 aa13.45□□□□□ -0.26
SLC38A1-202ENST00000439706 C12orf60Q5U649 245 aa13.45□□□□□ -0.26
SLC38A1-202ENST00000439706 CAPRIN2Q6IMN6 1127 aaKnown RBP13.45□□□□□ -0.26
SLC38A1-202ENST00000439706 KCTD1Q719H9 257 aa13.45□□□□□ -0.26
SLC38A1-202ENST00000439706 PALB2Q86YC2 1186 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms