RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CETN3O15182 167 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 RPS6KA5O75582 802 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 GJC1P36383 396 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 MAN2A1Q16706 1144 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 AOC3Q16853 763 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 ASPRV1Q53RT3 343 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 HP1BP3Q5SSJ5 553 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 GKAP1Q5VSY0 366 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 SEPT14Q6ZU15 432 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 UNC13DQ70J99 1090 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 SUGP1Q8IWZ8 645 aaKnown RBP10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 ELOA2Q8IYF1 753 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 NSMCE1Q8WV22 266 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 GLG1Q92896 1179 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 ELMO3Q96BJ8 720 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 ANO3Q9BYT9 981 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 CNOT8Q9UFF9 292 aaKnown RBP10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 DNM3Q9UQ16 869 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 CTDP1Q9Y5B0 961 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 ADAMTS7Q9UKP4 1686 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 A0A087X0T9 212 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 GMNCA6NCL1 334 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 ZBTB5O15062 677 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 PPP1R11O60927 126 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 FAM228BP0C875 321 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 HSD17B3P37058 310 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 TRIP13Q15645 432 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 GNPTABQ3T906 1256 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 SLC9C1Q4G0N8 1177 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 U2AF1L4Q8WU68 220 aaKnown RBP10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 SEC16BQ96JE7 1060 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 CSRNP1Q96S65 589 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 TOGARAM1Q9Y4F4 1720 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 F5H6K3 240 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 LAD1O00515 517 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 FAM13AO94988 1023 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 FKBP3Q00688 224 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 KLRC3Q07444 240 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 KCNB1Q14721 858 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 AADACL2Q6P093 401 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 SFR1Q86XK3 245 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 CTNNBL1Q8WYA6 563 aaPredicted RBP10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 DNAJC7Q99615 494 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 NEUROG2Q9H2A3 272 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 GLI3P10071 1580 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 RASSF10A6NK89 507 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 ERVK-9P63128 1117 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 TNNC1P63316 161 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 ABCB5Q2M3G0 1257 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 KLHDC7AQ5VTJ3 777 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 EMBQ6PCB8 327 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 PEX26Q7Z412 305 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 FBXO11Q86XK2 927 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 CNPY4Q8N129 248 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 CCDC63Q8NA47 563 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 RAPGEF5Q92565 580 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 OSBPL7Q9BZF2 842 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 DBR1Q9UK59 544 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 ZBTB12Q9Y330 459 aaPredicted RBP10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 COL4A3BPQ9Y5P4 624 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 PDS5AQ29RF7 1337 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 LRP6O75581 1613 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 LAMB4A4D0S4 1761 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 A0A1B0GUA9 196 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 SLC9A1P19634 815 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 RNASELQ05823 741 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 RFX8Q6ZV50 586 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 TRIM6Q9C030 488 aaPredicted RBP10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 PCIF1Q9H4Z3 704 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 TMOD2Q9NZR1 351 aa10.81□□□□□ -0.68
CDC42SE1-202ENST00000439374 LRRC10BA6NIK2 292 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 LRRN2O75325 713 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 FGFR4P22455 802 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 ECE1P42892 770 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 PSEN1P49768 467 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 KCNA1Q09470 495 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 ASIC2Q16515 512 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 FAM83BQ5T0W9 1011 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 FAM182AQ5T1J6 154 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 RPGRIP1Q96KN7 1286 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 C7orf25Q9BPX7 421 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 FAM118BQ9BPY3 351 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 TMOD4Q9NZQ9 345 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 KCNG1Q9UIX4 513 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 NUP188Q5SRE5 1749 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 TARSL2A2RTX5 802 aaKnown RBP10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 SART1O43290 800 aaKnown RBP10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 PPIP5K2O43314 1243 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 C21orf2O43822 256 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 MED24O75448 989 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 ARHGAP4P98171 946 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 RSRC1Q96IZ7 334 aaKnown RBP10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 TSGA10Q9BZW7 698 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 DONSONQ9NYP3 566 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 ARMCX3Q9UH62 379 aaPredicted RBP10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 ITIH6Q6UXX5 1313 aa10.8□□□□□ -0.68
CDC42SE1-202ENST00000439374 ACSL3O95573 720 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 SHBGP04278 402 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 MMEP08473 750 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 SHMT1P34896 483 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms