RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 MRPL11Q9Y3B7 192 aaKnown RBP13.29□□□□□ -0.28
HDAC8-214ENST00000439122 SLC16A3O15427 465 aaKnown RBP13.29□□□□□ -0.28
HDAC8-214ENST00000439122 SLC7A5Q01650 507 aa13.29□□□□□ -0.28
HDAC8-214ENST00000439122 ZC2HC1CQ53FD0 456 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-214ENST00000439122 GBP6Q6ZN66 633 aa13.29□□□□□ -0.28
HDAC8-214ENST00000439122 C1orf186Q6ZWK4 172 aa13.29□□□□□ -0.28
HDAC8-214ENST00000439122 IRF2BP2Q7Z5L9 587 aa13.29□□□□□ -0.28
HDAC8-214ENST00000439122 SLC35C1Q96A29 364 aa13.29□□□□□ -0.28
HDAC8-214ENST00000439122 VCPKMTQ9H867 229 aa13.29□□□□□ -0.28
HDAC8-214ENST00000439122 EHMT1Q9H9B1 1298 aa13.29□□□□□ -0.28
HDAC8-214ENST00000439122 FBXO28Q9NVF7 368 aa13.29□□□□□ -0.28
HDAC8-214ENST00000439122 GCNT4Q9P109 453 aa13.29□□□□□ -0.28
HDAC8-214ENST00000439122 HPCAL4Q9UM19 191 aa13.29□□□□□ -0.28
HDAC8-214ENST00000439122 CNTNAP1P78357 1384 aa13.28□□□□□ -0.28
HDAC8-214ENST00000439122 TGFB1I1O43294 461 aa13.28□□□□□ -0.28
HDAC8-214ENST00000439122 VIL1P09327 827 aaKnown RBP13.28□□□□□ -0.28
HDAC8-214ENST00000439122 EPHA7Q15375 998 aa13.28□□□□□ -0.28
HDAC8-214ENST00000439122 SLC15A2Q16348 729 aa13.28□□□□□ -0.28
HDAC8-214ENST00000439122 CFAP221Q4G0U5 840 aa13.28□□□□□ -0.28
HDAC8-214ENST00000439122 DPY19L2P1Q6NXN4 242 aa13.28□□□□□ -0.28
HDAC8-214ENST00000439122 ZNF571Q7Z3V5 609 aaPredicted RBP13.28□□□□□ -0.28
HDAC8-214ENST00000439122 ZNF277Q9NRM2 450 aaPredicted RBP13.28□□□□□ -0.28
HDAC8-214ENST00000439122 DMGDHQ9UI17 866 aaKnown RBP13.28□□□□□ -0.28
HDAC8-214ENST00000439122 SHTN1A0MZ66 631 aa13.28□□□□□ -0.28
HDAC8-214ENST00000439122 EIF3DO15371 548 aaKnown RBP eCLIP13.28□□□□□ -0.28
HDAC8-214ENST00000439122 ARP10275 920 aa13.28□□□□□ -0.28
HDAC8-214ENST00000439122 SPDYE2Q495Y8 402 aa13.28□□□□□ -0.28
HDAC8-214ENST00000439122 LDHDQ86WU2 507 aa13.28□□□□□ -0.28
HDAC8-214ENST00000439122 KSR1Q8IVT5 923 aa13.28□□□□□ -0.28
HDAC8-214ENST00000439122 TEX2Q8IWB9 1127 aa13.28□□□□□ -0.28
HDAC8-214ENST00000439122 RBM46Q8TBY0 533 aaKnown RBP13.28□□□□□ -0.28
HDAC8-214ENST00000439122 GLIS2Q9BZE0 524 aaPredicted RBP13.28□□□□□ -0.28
HDAC8-214ENST00000439122 RBM12Q9NTZ6 932 aaKnown RBP13.28□□□□□ -0.28
HDAC8-214ENST00000439122 PACSIN2Q9UNF0 486 aaPredicted RBP13.28□□□□□ -0.28
HDAC8-214ENST00000439122 PCDHGC5Q9Y5F6 944 aa13.28□□□□□ -0.28
HDAC8-214ENST00000439122 BZW2Q9Y6E2 419 aaKnown RBP13.28□□□□□ -0.28
HDAC8-214ENST00000439122 PPP1R12BO60237 982 aaPredicted RBP13.27□□□□□ -0.28
HDAC8-214ENST00000439122 C8orf74Q6P047 294 aa13.27□□□□□ -0.28
HDAC8-214ENST00000439122 FAM178BQ8IXR5 827 aa13.27□□□□□ -0.28
HDAC8-214ENST00000439122 FAM186BQ8IYM0 893 aa13.27□□□□□ -0.28
HDAC8-214ENST00000439122 TTLL6Q8N841 843 aa13.27□□□□□ -0.28
HDAC8-214ENST00000439122 NACC1Q96RE7 527 aa13.27□□□□□ -0.28
HDAC8-214ENST00000439122 UNC45AQ9H3U1 944 aa13.27□□□□□ -0.28
HDAC8-214ENST00000439122 WRAP73Q9P2S5 460 aaPredicted RBP13.27□□□□□ -0.28
HDAC8-214ENST00000439122 ZMYM2Q9UBW7 1377 aa13.27□□□□□ -0.29
HDAC8-214ENST00000439122 DDX39AO00148 427 aaKnown RBP13.27□□□□□ -0.29
HDAC8-214ENST00000439122 PSMC2P35998 433 aaKnown RBP13.27□□□□□ -0.29
HDAC8-214ENST00000439122 AARSP49588 968 aaKnown RBP eCLIP13.27□□□□□ -0.293e-6■■■■■ 61.8
HDAC8-214ENST00000439122 COG2Q14746 738 aa13.27□□□□□ -0.29
HDAC8-214ENST00000439122 GJB7Q6PEY0 223 aa13.27□□□□□ -0.29
HDAC8-214ENST00000439122 FAM160B2Q86V87 743 aa13.27□□□□□ -0.29
HDAC8-214ENST00000439122 RTKN2Q8IZC4 609 aa13.27□□□□□ -0.29
HDAC8-214ENST00000439122 GMLQ99445 158 aa13.27□□□□□ -0.29
HDAC8-214ENST00000439122 WDR11Q9BZH6 1224 aa13.27□□□□□ -0.29
HDAC8-214ENST00000439122 PSD3Q9NYI0 1048 aa13.27□□□□□ -0.29
HDAC8-214ENST00000439122 STIM2Q9P246 746 aa13.27□□□□□ -0.29
HDAC8-214ENST00000439122 GRID2IPA4D2P6 1211 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 IPO5O00410 1097 aaKnown RBP13.26□□□□□ -0.29
HDAC8-214ENST00000439122 RNF40O75150 1001 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 SYF2O95926 243 aaKnown RBP13.26□□□□□ -0.29
HDAC8-214ENST00000439122 CAP2P40123 477 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 SETQ01105 290 aaPredicted RBP13.26□□□□□ -0.29
HDAC8-214ENST00000439122 ODR4Q5SWX8 454 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 C10orf76Q5T2E6 689 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 MEI1Q5TIA1 1274 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 HS2ST1Q7LGA3 356 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 ZNF720Q7Z2F6 126 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 DNAAF5Q86Y56 855 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 BANK1Q8NDB2 785 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 AENQ8WTP8 325 aaKnown RBP13.26□□□□□ -0.29
HDAC8-214ENST00000439122 LXNQ9BS40 222 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 TEKT3Q9BXF9 490 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 PKD2L1Q9P0L9 805 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 RNF14Q9UBS8 474 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 NAGPAQ9UK23 515 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 FEM1BQ9UK73 627 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 FRMPD4Q14CM0 1322 aa13.26□□□□□ -0.29
HDAC8-214ENST00000439122 FLOT1O75955 427 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 NOP2P46087 812 aaKnown RBP13.25□□□□□ -0.29
HDAC8-214ENST00000439122 RNASE9P60153 205 aaKnown RBP13.25□□□□□ -0.29
HDAC8-214ENST00000439122 ALKBH5Q6P6C2 394 aaKnown RBP13.25□□□□□ -0.29
HDAC8-214ENST00000439122 STXBP4Q6ZWJ1 553 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 SND1Q7KZF4 910 aaKnown RBP eCLIP13.25□□□□□ -0.29
HDAC8-214ENST00000439122 RIN2Q8WYP3 895 aaPredicted RBP13.25□□□□□ -0.29
HDAC8-214ENST00000439122 RUBCNQ92622 972 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 BORCS6Q96GS4 357 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 AGBL1Q96MI9 1066 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 FAM204AQ9H8W3 233 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 SIX2Q9NPC8 291 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 STK32BQ9NY57 414 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 AJAP1Q9UKB5 411 aaPredicted RBP13.25□□□□□ -0.29
HDAC8-214ENST00000439122 CCPG1Q9ULG6 757 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 GTPBP10A4D1E9 387 aaKnown RBP13.25□□□□□ -0.29
HDAC8-214ENST00000439122 PLA2G6O60733 806 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 GGCXP38435 758 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 CYP2J2P51589 502 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 HNRNPH2P55795 449 aaKnown RBP13.25□□□□□ -0.29
HDAC8-214ENST00000439122 TAF3Q5VWG9 929 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 VPS36Q86VN1 386 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 CALCOCO1Q9P1Z2 691 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms