RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 GRIN2CQ14957 1233 aa27.82■■■□□ 2.04
RAPGEF1-206ENST00000438647 UGCGQ16739 394 aa27.82■■■□□ 2.04
RAPGEF1-206ENST00000438647 TSHZ1Q6ZSZ6 1077 aa27.82■■■□□ 2.04
RAPGEF1-206ENST00000438647 HAS1Q92839 578 aa27.82■■■□□ 2.04
RAPGEF1-206ENST00000438647 FOXP1Q9H334 677 aaPredicted RBP27.82■■■□□ 2.04
RAPGEF1-206ENST00000438647 VAV3Q9UKW4 847 aa27.82■■■□□ 2.04
RAPGEF1-206ENST00000438647 GBF1Q92538 1859 aa27.82■■■□□ 2.04
RAPGEF1-206ENST00000438647 DKC1O60832 514 aaKnown RBP eCLIP27.81■■■□□ 2.04
RAPGEF1-206ENST00000438647 GJB5O95377 273 aa27.81■■■□□ 2.04
RAPGEF1-206ENST00000438647 CA3P07451 260 aa27.81■■■□□ 2.04
RAPGEF1-206ENST00000438647 MYOGP15173 224 aa27.81■■■□□ 2.04
RAPGEF1-206ENST00000438647 TMEM62Q0P6H9 643 aa27.81■■■□□ 2.04
RAPGEF1-206ENST00000438647 MKRN4PQ13434 485 aaPredicted RBP27.81■■■□□ 2.04
RAPGEF1-206ENST00000438647 GNL2Q13823 731 aaKnown RBP27.81■■■□□ 2.04
RAPGEF1-206ENST00000438647 XKR3Q5GH77 459 aa27.81■■■□□ 2.04
RAPGEF1-206ENST00000438647 METTL13Q8N6R0 699 aa27.81■■■□□ 2.04
RAPGEF1-206ENST00000438647 TMX3Q96JJ7 454 aa27.81■■■□□ 2.04
RAPGEF1-206ENST00000438647 CELF4Q9BZC1 486 aaKnown RBP27.81■■■□□ 2.04
RAPGEF1-206ENST00000438647 OSBPL7Q9BZF2 842 aa27.81■■■□□ 2.04
RAPGEF1-206ENST00000438647 KDM3AQ9Y4C1 1321 aa27.81■■■□□ 2.04
RAPGEF1-206ENST00000438647 NEMFO60524 1076 aa27.8■■■□□ 2.04
RAPGEF1-206ENST00000438647 TMOD1P28289 359 aa27.8■■■□□ 2.04
RAPGEF1-206ENST00000438647 PSMC5P62195 406 aa27.8■■■□□ 2.04
RAPGEF1-206ENST00000438647 CALCRLQ16602 461 aa27.8■■■□□ 2.04
RAPGEF1-206ENST00000438647 KIAA0319LQ8IZA0 1049 aa27.8■■■□□ 2.04
RAPGEF1-206ENST00000438647 MYOCDQ8IZQ8 938 aa27.8■■■□□ 2.04
RAPGEF1-206ENST00000438647 MYLIPQ8WY64 445 aa27.8■■■□□ 2.04
RAPGEF1-206ENST00000438647 MICAL3Q7RTP6 2002 aa27.8■■■□□ 2.04
RAPGEF1-206ENST00000438647 WDR81Q562E7 1941 aa27.79■■■□□ 2.04
RAPGEF1-206ENST00000438647 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.79■■■□□ 2.04
RAPGEF1-206ENST00000438647 RAD9AQ99638 391 aa27.79■■■□□ 2.04
RAPGEF1-206ENST00000438647 BACH2Q9BYV9 841 aa27.79■■■□□ 2.04
RAPGEF1-206ENST00000438647 SEPT9Q9UHD8 586 aaPredicted RBP27.79■■■□□ 2.04
RAPGEF1-206ENST00000438647 EML1O00423 815 aa27.78■■■□□ 2.04
RAPGEF1-206ENST00000438647 FOSL2P15408 326 aa27.78■■■□□ 2.04
RAPGEF1-206ENST00000438647 QARSP47897 775 aaKnown RBP27.78■■■□□ 2.04
RAPGEF1-206ENST00000438647 TBC1D8BQ0IIM8 1120 aa27.78■■■□□ 2.04
RAPGEF1-206ENST00000438647 FAM43BQ6ZT52 329 aaPredicted RBP27.78■■■□□ 2.04
RAPGEF1-206ENST00000438647 ZNF710Q8N1W2 664 aa27.78■■■□□ 2.04
RAPGEF1-206ENST00000438647 BANK1Q8NDB2 785 aa27.78■■■□□ 2.04
RAPGEF1-206ENST00000438647 MAP7D2Q96T17 732 aa27.78■■■□□ 2.04
RAPGEF1-206ENST00000438647 GAS2L1Q99501 681 aaPredicted RBP27.78■■■□□ 2.04
RAPGEF1-206ENST00000438647 NIFKQ9BYG3 293 aaKnown RBP27.78■■■□□ 2.04
RAPGEF1-206ENST00000438647 CHD9Q3L8U1 2897 aa27.78■■■□□ 2.04
RAPGEF1-206ENST00000438647 SIP14410 1827 aa27.77■■■□□ 2.04
RAPGEF1-206ENST00000438647 CD2BP2O95400 341 aaKnown RBP27.77■■■□□ 2.04
RAPGEF1-206ENST00000438647 P4HBP07237 508 aaKnown RBP27.77■■■□□ 2.04
RAPGEF1-206ENST00000438647 EPHA7Q15375 998 aa27.77■■■□□ 2.04
RAPGEF1-206ENST00000438647 TMCO2Q7Z6W1 182 aaPredicted RBP27.77■■■□□ 2.04
RAPGEF1-206ENST00000438647 FTHL17Q9BXU8 183 aa27.77■■■□□ 2.04
RAPGEF1-206ENST00000438647 PCDHA12Q9UN75 941 aa27.77■■■□□ 2.04
RAPGEF1-206ENST00000438647 GINS2Q9Y248 185 aa27.77■■■□□ 2.04
RAPGEF1-206ENST00000438647 GTF3C3Q9Y5Q9 886 aa27.77■■■□□ 2.04
RAPGEF1-206ENST00000438647 CD52P31358 61 aa27.76■■■□□ 2.03
RAPGEF1-206ENST00000438647 PAK2Q13177 524 aa27.76■■■□□ 2.03
RAPGEF1-206ENST00000438647 ORC2Q13416 577 aaPredicted RBP27.76■■■□□ 2.03
RAPGEF1-206ENST00000438647 ODR4Q5SWX8 454 aa27.76■■■□□ 2.03
RAPGEF1-206ENST00000438647 NCAPH2Q6IBW4 605 aa27.76■■■□□ 2.03
RAPGEF1-206ENST00000438647 EFCAB12Q6NXP0 572 aa27.76■■■□□ 2.03
RAPGEF1-206ENST00000438647 NOSTRINQ8IVI9 506 aa27.76■■■□□ 2.03
RAPGEF1-206ENST00000438647 TOP1MTQ969P6 601 aa27.76■■■□□ 2.03
RAPGEF1-206ENST00000438647 AGO3Q9H9G7 860 aaKnown RBP27.76■■■□□ 2.03
RAPGEF1-206ENST00000438647 INSL6Q9Y581 213 aa27.76■■■□□ 2.03
RAPGEF1-206ENST00000438647 PTPRSQ13332 1948 aa27.76■■■□□ 2.03
RAPGEF1-206ENST00000438647 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.75■■■□□ 2.03
RAPGEF1-206ENST00000438647 ATP2B1P20020 1258 aa27.75■■■□□ 2.03
RAPGEF1-206ENST00000438647 CLCN3P51790 818 aa27.75■■■□□ 2.03
RAPGEF1-206ENST00000438647 TARBP2Q15633 366 aaKnown RBP27.75■■■□□ 2.03
RAPGEF1-206ENST00000438647 MTERF2Q49AM1 385 aa27.75■■■□□ 2.03
RAPGEF1-206ENST00000438647 FAM117BQ6P1L5 589 aa27.75■■■□□ 2.03
RAPGEF1-206ENST00000438647 PRDM12Q9H4Q4 367 aa27.75■■■□□ 2.03
RAPGEF1-206ENST00000438647 PADI3Q9ULW8 664 aa27.75■■■□□ 2.03
RAPGEF1-206ENST00000438647 AKT3Q9Y243 479 aa27.75■■■□□ 2.03
RAPGEF1-206ENST00000438647 EVPLQ92817 2033 aa27.75■■■□□ 2.03
RAPGEF1-206ENST00000438647 DDX11L8A8MPP1 907 aa27.74■■■□□ 2.03
RAPGEF1-206ENST00000438647 TRAPPC10P48553 1259 aa27.74■■■□□ 2.03
RAPGEF1-206ENST00000438647 SPIRE1Q08AE8 756 aa27.74■■■□□ 2.03
RAPGEF1-206ENST00000438647 LINC01465Q8N7H1 131 aa27.74■■■□□ 2.03
RAPGEF1-206ENST00000438647 TTC12Q9H892 705 aaPredicted RBP27.74■■■□□ 2.03
RAPGEF1-206ENST00000438647 NOL7Q9UMY1 257 aaKnown RBP27.74■■■□□ 2.03
RAPGEF1-206ENST00000438647 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.74■■■□□ 2.03
RAPGEF1-206ENST00000438647 MYO9BQ13459 2157 aa27.74■■■□□ 2.03
RAPGEF1-206ENST00000438647 WNT7AO00755 349 aa27.73■■■□□ 2.03
RAPGEF1-206ENST00000438647 RPS6KA5O75582 802 aa27.73■■■□□ 2.03
RAPGEF1-206ENST00000438647 STBD1O95210 358 aa27.73■■■□□ 2.03
RAPGEF1-206ENST00000438647 VTNP04004 478 aa27.73■■■□□ 2.03
RAPGEF1-206ENST00000438647 MCM7P33993 719 aa27.73■■■□□ 2.03
RAPGEF1-206ENST00000438647 CRYBB1P53674 252 aaPredicted RBP27.73■■■□□ 2.03
RAPGEF1-206ENST00000438647 TAP1Q03518 808 aa27.73■■■□□ 2.03
RAPGEF1-206ENST00000438647 KIZQ2M2Z5 673 aa27.73■■■□□ 2.03
RAPGEF1-206ENST00000438647 LRRC71Q8N4P6 559 aa27.73■■■□□ 2.03
RAPGEF1-206ENST00000438647 MTMR9Q96QG7 549 aa27.73■■■□□ 2.03
RAPGEF1-206ENST00000438647 JPH2Q9BR39 696 aaPredicted RBP27.73■■■□□ 2.03
RAPGEF1-206ENST00000438647 LXNQ9BS40 222 aa27.73■■■□□ 2.03
RAPGEF1-206ENST00000438647 SUGCTQ9HAC7 445 aa27.73■■■□□ 2.03
RAPGEF1-206ENST00000438647 PPME1Q9Y570 386 aa27.73■■■□□ 2.03
RAPGEF1-206ENST00000438647 CHD7Q9P2D1 2997 aa27.73■■■□□ 2.03
RAPGEF1-206ENST00000438647 TXKP42681 527 aa27.72■■■□□ 2.03
RAPGEF1-206ENST00000438647 HTRA4P83105 476 aaPredicted RBP27.72■■■□□ 2.03
RAPGEF1-206ENST00000438647 ANO5Q75V66 913 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms