RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 EXOC8Q8IYI6 725 aa18.35■□□□□ 0.53
CTSD-205ENST00000438213 KIAA0319LQ8IZA0 1049 aa18.35■□□□□ 0.53
CTSD-205ENST00000438213 ZNF710Q8N1W2 664 aa18.35■□□□□ 0.53
CTSD-205ENST00000438213 C4orf32Q8N8J7 132 aa18.35■□□□□ 0.53
CTSD-205ENST00000438213 ERMNQ8TAM6 284 aa18.35■□□□□ 0.53
CTSD-205ENST00000438213 VWCEQ96DN2 955 aa18.35■□□□□ 0.53
CTSD-205ENST00000438213 ZBTB10Q96DT7 871 aa18.35■□□□□ 0.53
CTSD-205ENST00000438213 DYDC2Q96IM9 177 aa18.35■□□□□ 0.53
CTSD-205ENST00000438213 HSD17B14Q9BPX1 270 aa18.35■□□□□ 0.53
CTSD-205ENST00000438213 LXNQ9BS40 222 aa18.35■□□□□ 0.53
CTSD-205ENST00000438213 RAB34Q9BZG1 259 aa18.35■□□□□ 0.53
CTSD-205ENST00000438213 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.35■□□□□ 0.53
CTSD-205ENST00000438213 RGL1Q9NZL6 768 aa18.35■□□□□ 0.53
CTSD-205ENST00000438213 SEPT9Q9UHD8 586 aaPredicted RBP18.35■□□□□ 0.53
CTSD-205ENST00000438213 SLC4A7Q9Y6M7 1214 aa18.35■□□□□ 0.53
CTSD-205ENST00000438213 EFCAB14O75071 495 aa18.34■□□□□ 0.53
CTSD-205ENST00000438213 BAIAP3O94812 1187 aa18.34■□□□□ 0.53
CTSD-205ENST00000438213 SLITRK3O94933 977 aa18.34■□□□□ 0.53
CTSD-205ENST00000438213 STBD1O95210 358 aa18.34■□□□□ 0.53
CTSD-205ENST00000438213 FXR1P51114 621 aaKnown RBP eCLIP18.34■□□□□ 0.53
CTSD-205ENST00000438213 IKBKEQ14164 716 aa18.34■□□□□ 0.53
CTSD-205ENST00000438213 CTTNQ14247 550 aaKnown RBP18.34■□□□□ 0.53
CTSD-205ENST00000438213 PDIA5Q14554 519 aa18.34■□□□□ 0.53
CTSD-205ENST00000438213 NBR1Q14596 966 aa18.34■□□□□ 0.53
CTSD-205ENST00000438213 MBTPS1Q14703 1052 aa18.34■□□□□ 0.53
CTSD-205ENST00000438213 TARBP2Q15633 366 aaKnown RBP18.34■□□□□ 0.53
CTSD-205ENST00000438213 MTERF2Q49AM1 385 aa18.34■□□□□ 0.53
CTSD-205ENST00000438213 EFCAB12Q6NXP0 572 aa18.34■□□□□ 0.53
CTSD-205ENST00000438213 SEPT8Q92599 483 aa18.34■□□□□ 0.53
CTSD-205ENST00000438213 JPH2Q9BR39 696 aaPredicted RBP18.34■□□□□ 0.53
CTSD-205ENST00000438213 PPME1Q9Y570 386 aa18.34■□□□□ 0.53
CTSD-205ENST00000438213 STK24Q9Y6E0 443 aa18.34■□□□□ 0.53
CTSD-205ENST00000438213 CDY2AQ9Y6F7 541 aa18.34■□□□□ 0.53
CTSD-205ENST00000438213 ABHD14A-ACY1A0A1B0GW23 586 aa18.33■□□□□ 0.52
CTSD-205ENST00000438213 PRPHP41219 470 aa18.33■□□□□ 0.52
CTSD-205ENST00000438213 DNM2P50570 870 aa18.33■□□□□ 0.52
CTSD-205ENST00000438213 SMAD3P84022 425 aaKnown RBP18.33■□□□□ 0.52
CTSD-205ENST00000438213 CYP4A11Q02928 519 aa18.33■□□□□ 0.52
CTSD-205ENST00000438213 USP38Q8NB14 1042 aa18.33■□□□□ 0.52
CTSD-205ENST00000438213 MAP7D2Q96T17 732 aa18.33■□□□□ 0.52
CTSD-205ENST00000438213 CELF4Q9BZC1 486 aaKnown RBP18.33■□□□□ 0.52
CTSD-205ENST00000438213 SUGCTQ9HAC7 445 aa18.33■□□□□ 0.52
CTSD-205ENST00000438213 TRPV2Q9Y5S1 764 aa18.33■□□□□ 0.52
CTSD-205ENST00000438213 SQORQ9Y6N5 450 aa18.33■□□□□ 0.52
CTSD-205ENST00000438213 POTEMA6NI47 508 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 STX6O43752 255 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 LYPLA2O95372 231 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 XRCC6P12956 609 aaKnown RBP eCLIP18.32■□□□□ 0.52
CTSD-205ENST00000438213 YWHABP31946 246 aaKnown RBP18.32■□□□□ 0.52
CTSD-205ENST00000438213 KCNJ6P48051 423 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 FXR2P51116 673 aaKnown RBP eCLIP18.32■□□□□ 0.52
CTSD-205ENST00000438213 CDC42EP1Q00587 391 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 MGAT3Q09327 533 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 PLEKHG4Q58EX7 1191 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 GPR153Q6NV75 609 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 DTHD1Q6ZMT9 781 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 ANO5Q75V66 913 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 FERMT3Q86UX7 667 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 DBF4BQ8NFT6 615 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 APBB2Q92870 758 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 CEP170P1Q96L14 293 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 TUFT1Q9NNX1 390 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 CYP26B1Q9NR63 512 aa18.32■□□□□ 0.52
CTSD-205ENST00000438213 CXXC1Q9P0U4 656 aaPredicted RBP18.32■□□□□ 0.52
CTSD-205ENST00000438213 KDM3AQ9Y4C1 1321 aa18.31■□□□□ 0.52
CTSD-205ENST00000438213 SOX1O00570 391 aaPredicted RBP18.31■□□□□ 0.52
CTSD-205ENST00000438213 BMP15O95972 392 aa18.31■□□□□ 0.52
CTSD-205ENST00000438213 TMEM62Q0P6H9 643 aa18.31■□□□□ 0.52
CTSD-205ENST00000438213 FAM43BQ6ZT52 329 aaPredicted RBP18.31■□□□□ 0.52
CTSD-205ENST00000438213 PHOSPHO2Q8TCD6 241 aa18.31■□□□□ 0.52
CTSD-205ENST00000438213 POLR3CQ9BUI4 534 aaPredicted RBP18.31■□□□□ 0.52
CTSD-205ENST00000438213 ZSCAN16Q9H4T2 348 aaPredicted RBP18.31■□□□□ 0.52
CTSD-205ENST00000438213 ANKEF1Q9NU02 776 aa18.31■□□□□ 0.52
CTSD-205ENST00000438213 LRWD1Q9UFC0 647 aa18.31■□□□□ 0.52
CTSD-205ENST00000438213 AKT3Q9Y243 479 aa18.31■□□□□ 0.52
CTSD-205ENST00000438213 SCN5AQ14524 2016 aa18.31■□□□□ 0.52
CTSD-205ENST00000438213 WDR81Q562E7 1941 aa18.31■□□□□ 0.52
CTSD-205ENST00000438213 TMEM150BA6NC51 233 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 MAFO75444 373 aaPredicted RBP18.3■□□□□ 0.52
CTSD-205ENST00000438213 GHRP10912 638 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 ATP2A2P16615 1042 aaKnown RBP18.3■□□□□ 0.52
CTSD-205ENST00000438213 MUTP22033 750 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 RFC5P40937 340 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 CLCN3P51790 818 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 NPEPPSP55786 919 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 XKR9Q5GH70 373 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 FBXO47Q5MNV8 452 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 ODR4Q5SWX8 454 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 ARL6IP4Q66PJ3 421 aaKnown RBP18.3■□□□□ 0.52
CTSD-205ENST00000438213 HAUS3Q68CZ6 603 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 LRRC71Q8N4P6 559 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 TET1Q8NFU7 2136 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 SLC7A3Q8WY07 619 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 LRCH3Q96II8 777 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 CCDC43Q96MW1 224 aaKnown RBP18.3■□□□□ 0.52
CTSD-205ENST00000438213 NACC1Q96RE7 527 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 CEP89Q96ST8 783 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 SH2D3AQ9BRG2 576 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 IFIH1Q9BYX4 1025 aaKnown RBP18.3■□□□□ 0.52
CTSD-205ENST00000438213 WRAP73Q9P2S5 460 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms