RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 SNW1Q13573 536 aaKnown RBP18.74■□□□□ 0.59
CALD1-209ENST00000436461 MCM6Q14566 821 aa18.74■□□□□ 0.59
CALD1-209ENST00000436461 XKR9Q5GH70 373 aa18.74■□□□□ 0.59
CALD1-209ENST00000436461 FAM47CQ5HY64 1035 aa18.74■□□□□ 0.59
CALD1-209ENST00000436461 CCDC73Q6ZRK6 1079 aa18.74■□□□□ 0.59
CALD1-209ENST00000436461 BBXQ8WY36 941 aaPredicted RBP18.74■□□□□ 0.59
CALD1-209ENST00000436461 SETD4Q9NVD3 440 aa18.74■□□□□ 0.59
CALD1-209ENST00000436461 SERTAD1Q9UHV2 236 aa18.74■□□□□ 0.59
CALD1-209ENST00000436461 DNM3Q9UQ16 869 aa18.74■□□□□ 0.59
CALD1-209ENST00000436461 EVPLQ92817 2033 aa18.73■□□□□ 0.59
CALD1-209ENST00000436461 HBP1O60381 514 aa18.73■□□□□ 0.59
CALD1-209ENST00000436461 MUTP22033 750 aa18.73■□□□□ 0.59
CALD1-209ENST00000436461 ZNF200P98182 395 aaPredicted RBP18.73■□□□□ 0.59
CALD1-209ENST00000436461 PPFIA1Q13136 1202 aa18.73■□□□□ 0.59
CALD1-209ENST00000436461 ITGA7Q13683 1181 aa18.73■□□□□ 0.59
CALD1-209ENST00000436461 LONRF3Q496Y0 759 aa18.73■□□□□ 0.59
CALD1-209ENST00000436461 FMR1NBQ8N0W7 255 aaPredicted RBP18.73■□□□□ 0.59
CALD1-209ENST00000436461 ENGASEQ8NFI3 743 aa18.73■□□□□ 0.59
CALD1-209ENST00000436461 GPT2Q8TD30 523 aa18.73■□□□□ 0.59
CALD1-209ENST00000436461 RAD54LQ92698 747 aa18.73■□□□□ 0.59
CALD1-209ENST00000436461 PAWRQ96IZ0 340 aaKnown RBP18.73■□□□□ 0.59
CALD1-209ENST00000436461 FAM167AQ96KS9 214 aa18.73■□□□□ 0.59
CALD1-209ENST00000436461 CEP170P1Q96L14 293 aa18.73■□□□□ 0.59
CALD1-209ENST00000436461 NRBP2Q9NSY0 501 aa18.73■□□□□ 0.59
CALD1-209ENST00000436461 ZNF202O95125 648 aa18.72■□□□□ 0.59
CALD1-209ENST00000436461 EYA4O95677 639 aa18.72■□□□□ 0.59
CALD1-209ENST00000436461 PLA2G4BP0C869 781 aa18.72■□□□□ 0.59
CALD1-209ENST00000436461 ATN1P54259 1190 aaPredicted RBP18.72■□□□□ 0.59
CALD1-209ENST00000436461 SOX10P56693 466 aa18.72■□□□□ 0.59
CALD1-209ENST00000436461 GRIK4Q16099 956 aa18.72■□□□□ 0.59
CALD1-209ENST00000436461 GRAMD1CQ8IYS0 662 aa18.72■□□□□ 0.59
CALD1-209ENST00000436461 C7orf31Q8N865 590 aa18.72■□□□□ 0.59
CALD1-209ENST00000436461 LARP4BQ92615 738 aaKnown RBP18.72■□□□□ 0.59
CALD1-209ENST00000436461 NIFKQ9BYG3 293 aaKnown RBP18.72■□□□□ 0.59
CALD1-209ENST00000436461 POLD4Q9HCU8 107 aa18.72■□□□□ 0.59
CALD1-209ENST00000436461 CYP26B1Q9NR63 512 aa18.72■□□□□ 0.59
CALD1-209ENST00000436461 RBAK-RBAKDNI3L0D1 243 aa18.71■□□□□ 0.59
CALD1-209ENST00000436461 SLC26A4O43511 780 aa18.71■□□□□ 0.59
CALD1-209ENST00000436461 ACTN4O43707 911 aaKnown RBP18.71■□□□□ 0.59
CALD1-209ENST00000436461 CABYRO75952 493 aa18.71■□□□□ 0.59
CALD1-209ENST00000436461 SLC12A3P55017 1021 aa18.71■□□□□ 0.59
CALD1-209ENST00000436461 FAM160A1Q05DH4 1040 aa18.71■□□□□ 0.59
CALD1-209ENST00000436461 MAEAQ7L5Y9 396 aa18.71■□□□□ 0.59
CALD1-209ENST00000436461 OTUD6AQ7L8S5 288 aa18.71■□□□□ 0.59
CALD1-209ENST00000436461 IQUBQ8NA54 791 aa18.71■□□□□ 0.59
CALD1-209ENST00000436461 LMBR1Q8WVP7 490 aa18.71■□□□□ 0.59
CALD1-209ENST00000436461 CCDC43Q96MW1 224 aaKnown RBP18.71■□□□□ 0.59
CALD1-209ENST00000436461 CEP89Q96ST8 783 aa18.71■□□□□ 0.59
CALD1-209ENST00000436461 ANKEF1Q9NU02 776 aa18.71■□□□□ 0.59
CALD1-209ENST00000436461 ARHGEF35A5YM69 484 aa18.71■□□□□ 0.58
CALD1-209ENST00000436461 USO1O60763 962 aaKnown RBP18.71■□□□□ 0.58
CALD1-209ENST00000436461 CASP1P29466 404 aa18.71■□□□□ 0.58
CALD1-209ENST00000436461 RAD51AP2Q09MP3 1159 aa18.71■□□□□ 0.58
CALD1-209ENST00000436461 TARBP2Q15633 366 aaKnown RBP18.71■□□□□ 0.58
CALD1-209ENST00000436461 GDF6Q6KF10 455 aaPredicted RBP18.71■□□□□ 0.58
CALD1-209ENST00000436461 TNS4Q8IZW8 715 aa18.71■□□□□ 0.58
CALD1-209ENST00000436461 MTRQ99707 1265 aa18.71■□□□□ 0.58
CALD1-209ENST00000436461 RUSC1Q9BVN2 902 aa18.71■□□□□ 0.58
CALD1-209ENST00000436461 DACT1Q9NYF0 836 aa18.71■□□□□ 0.58
CALD1-209ENST00000436461 STK17AQ9UEE5 414 aa18.71■□□□□ 0.58
CALD1-209ENST00000436461 DBR1Q9UK59 544 aaKnown RBP18.71■□□□□ 0.58
CALD1-209ENST00000436461 NPHP3-ACAD11A0A0J9YXS1 232 aa18.7■□□□□ 0.58
CALD1-209ENST00000436461 CCDC85CA6NKD9 419 aa18.7■□□□□ 0.58
CALD1-209ENST00000436461 COL6A1P12109 1028 aa18.7■□□□□ 0.58
CALD1-209ENST00000436461 AFMP43652 599 aa18.7■□□□□ 0.58
CALD1-209ENST00000436461 CACNB1Q02641 598 aaPredicted RBP18.7■□□□□ 0.58
CALD1-209ENST00000436461 MARCH8Q5T0T0 291 aa18.7■□□□□ 0.58
CALD1-209ENST00000436461 SYT2Q8N9I0 419 aaPredicted RBP18.7■□□□□ 0.58
CALD1-209ENST00000436461 ANKLE1Q8NAG6 615 aa18.7■□□□□ 0.58
CALD1-209ENST00000436461 GTF2IRD1Q9UHL9 959 aa18.7■□□□□ 0.58
CALD1-209ENST00000436461 A0A0U1RQG5 324 aaPredicted RBP18.69■□□□□ 0.58
CALD1-209ENST00000436461 TREHO43280 583 aa18.69■□□□□ 0.58
CALD1-209ENST00000436461 XRCC6P12956 609 aaKnown RBP eCLIP18.69■□□□□ 0.58
CALD1-209ENST00000436461 NFKBIBQ15653 356 aa18.69■□□□□ 0.58
CALD1-209ENST00000436461 PADI6Q6TGC4 694 aa18.69■□□□□ 0.58
CALD1-209ENST00000436461 CEP57L1Q8IYX8 460 aa18.69■□□□□ 0.58
CALD1-209ENST00000436461 LRRC71Q8N4P6 559 aa18.69■□□□□ 0.58
CALD1-209ENST00000436461 CNNM3Q8NE01 707 aa18.69■□□□□ 0.58
CALD1-209ENST00000436461 C11orf49Q9H6J7 331 aa18.69■□□□□ 0.58
CALD1-209ENST00000436461 TRMT13Q9NUP7 481 aaKnown RBP18.69■□□□□ 0.58
CALD1-209ENST00000436461 NRCAMQ92823 1304 aa18.69■□□□□ 0.58
CALD1-209ENST00000436461 C17orf102A2RUQ5 167 aa18.68■□□□□ 0.58
CALD1-209ENST00000436461 C22orf31O95567 290 aa18.68■□□□□ 0.58
CALD1-209ENST00000436461 SLFN14P0C7P3 912 aa18.68■□□□□ 0.58
CALD1-209ENST00000436461 KLRC1P26715 233 aa18.68■□□□□ 0.58
CALD1-209ENST00000436461 TBC1D8BQ0IIM8 1120 aa18.68■□□□□ 0.58
CALD1-209ENST00000436461 DRP2Q13474 957 aa18.68■□□□□ 0.58
CALD1-209ENST00000436461 ZNF484Q5JVG2 852 aa18.68■□□□□ 0.58
CALD1-209ENST00000436461 RINT1Q6NUQ1 792 aa18.68■□□□□ 0.58
CALD1-209ENST00000436461 NFRKBQ6P4R8 1299 aa18.68■□□□□ 0.58
CALD1-209ENST00000436461 KRBA2Q6ZNG9 492 aa18.68■□□□□ 0.58
CALD1-209ENST00000436461 GPBP1Q86WP2 473 aa18.68■□□□□ 0.58
CALD1-209ENST00000436461 MYH11P35749 1972 aa18.68■□□□□ 0.58
CALD1-209ENST00000436461 MYMKA6NI61 221 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 ARVCFO00192 962 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 PRR29P0C7W0 189 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 CYP11B2P19099 503 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 POLGP54098 1239 aaPredicted RBP18.67■□□□□ 0.58
CALD1-209ENST00000436461 ADAM17P78536 824 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 ARSHQ5FYA8 562 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms