RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 MEI1Q5TIA1 1274 aa11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 CCDC70Q6NSX1 233 aa11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 MOXD1Q6UVY6 613 aa11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 TMEM179Q6ZVK1 233 aa11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 PROCA1Q8NCQ7 364 aaPredicted RBP11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 INPP4AQ96PE3 977 aaPredicted RBP11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 GLT8D2Q9H1C3 349 aa11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 NUCKS1Q9H1E3 243 aaKnown RBP11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 CHMP2AO43633 222 aa11.4□□□□□ -0.59
CLSTN1-203ENST00000435891 CFAP221Q4G0U5 840 aa11.4□□□□□ -0.59
CLSTN1-203ENST00000435891 ARHGAP27Q6ZUM4 889 aa11.4□□□□□ -0.59
CLSTN1-203ENST00000435891 EIF2AK1Q9BQI3 630 aaKnown RBP11.4□□□□□ -0.59
CLSTN1-203ENST00000435891 JPH2Q9BR39 696 aaPredicted RBP11.4□□□□□ -0.59
CLSTN1-203ENST00000435891 WDR18Q9BV38 432 aa11.4□□□□□ -0.59
CLSTN1-203ENST00000435891 QTRT2Q9H974 415 aaKnown RBP11.4□□□□□ -0.59
CLSTN1-203ENST00000435891 NFU1Q9UMS0 254 aa11.4□□□□□ -0.59
CLSTN1-203ENST00000435891 GCNT3O95395 438 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 HOXA7P31268 230 aaPredicted RBP11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 EXOC3L4Q17RC7 722 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 ZC2HC1CQ53FD0 456 aaPredicted RBP11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 ARL8AQ96BM9 186 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 MASTLQ96GX5 879 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 PRMT6Q96LA8 375 aaPredicted RBP11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 KRT12Q99456 494 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 SIX2Q9NPC8 291 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 PCDHB13Q9Y5F0 798 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 IGLV3-22A0A075B6J6 115 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 TGFB1I1O43294 461 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 AFPP02771 609 aaKnown RBP11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 NR3C1P04150 777 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 BMP3P12645 472 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 CALRP27797 417 aaKnown RBP11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 NMT1P30419 496 aaKnown RBP11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 COG2Q14746 738 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 PPP4R3CPQ6ZMV5 832 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 NLGN1Q8N2Q7 840 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 SLC35C1Q96A29 364 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 SPAG5Q96R06 1193 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 EPB41L5Q9HCM4 733 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 PRR12Q9ULL5 1215 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 XRCC5P13010 732 aaKnown RBP11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 GUCY2DQ02846 1103 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 EPHA7Q15375 998 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 STRIP1Q5VSL9 837 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 FRMD5Q7Z6J6 570 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 ERMNQ8TAM6 284 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 ACER1Q8TDN7 264 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 IFT81Q8WYA0 676 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 ATAD5Q96QE3 1844 aa11.39□□□□□ -0.59
CLSTN1-203ENST00000435891 TBX3O15119 743 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 HEXIM1O94992 359 aaKnown RBP11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 AOC3Q16853 763 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 TTC19Q6DKK2 380 aaPredicted RBP11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 RINT1Q6NUQ1 792 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 KRT27Q7Z3Y8 459 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 TADA2BQ86TJ2 420 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 GMCL1P1Q8NEA9 526 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 GMCL1Q96IK5 515 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 WRAP73Q9P2S5 460 aaPredicted RBP11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 NAGPAQ9UK23 515 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 GOLGA6CA6NDK9 693 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 PDXKO00764 312 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 RPS6KA5O75582 802 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 GOLGA6DP0CG33 693 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 CIITAP33076 1130 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 ZNF76P36508 570 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 EPHB4P54760 987 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 GOLGA6AQ9NYA3 693 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 RABGAP1Q9Y3P9 1069 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 ZMYM2Q9UBW7 1377 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 CFBP00751 764 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 KRT14P02533 472 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 CHRNA5P30532 468 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 PDE6BP35913 854 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 TTMPQ5BVD1 217 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 TPH2Q8IWU9 490 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 FAM20AQ96MK3 541 aa11.38□□□□□ -0.59
CLSTN1-203ENST00000435891 KCNK3O14649 394 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 SLITRK3O94933 977 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 SCP2P22307 547 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 GUCY2FP51841 1108 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 FBXW10Q5XX13 1052 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 ALKBH5Q6P6C2 394 aaKnown RBP11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 KLHL7Q8IXQ5 586 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 CASKIN2Q8WXE0 1202 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 DYDC2Q96IM9 177 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 ZIM3Q96PE6 472 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 CSRNP1Q96S65 589 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 SH3GL2Q99962 352 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 HSD17B14Q9BPX1 270 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 PLCB1Q9NQ66 1216 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 GDF3Q9NR23 364 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 TYW1Q9NV66 732 aaKnown RBP11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 GCNT4Q9P109 453 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 RAD51CO43502 376 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 HSPA1LP34931 641 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 CORO7P57737 925 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 FAM43BQ6ZT52 329 aaPredicted RBP11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 CDAN1Q8IWY9 1227 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 SH2D3CQ8N5H7 860 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms