RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 SPAG5Q96R06 1193 aa17.6■□□□□ 0.41
HLA-DQB2-231ENST00000435145 CSRNP1Q96S65 589 aa17.6■□□□□ 0.41
HLA-DQB2-231ENST00000435145 CWC15Q9P013 229 aaKnown RBP17.6■□□□□ 0.41
HLA-DQB2-231ENST00000435145 TMEM59LQ9UK28 342 aa17.6■□□□□ 0.41
HLA-DQB2-231ENST00000435145 TMX2Q9Y320 296 aa17.6■□□□□ 0.41
HLA-DQB2-231ENST00000435145 MRPS25P82663 173 aaKnown RBP17.6■□□□□ 0.41
HLA-DQB2-231ENST00000435145 KCNA1Q09470 495 aa17.6■□□□□ 0.41
HLA-DQB2-231ENST00000435145 AOC3Q16853 763 aa17.6■□□□□ 0.41
HLA-DQB2-231ENST00000435145 FIZ1Q96SL8 496 aa17.6■□□□□ 0.41
HLA-DQB2-231ENST00000435145 HINFPQ9BQA5 517 aa17.6■□□□□ 0.41
HLA-DQB2-231ENST00000435145 AJAP1Q9UKB5 411 aaPredicted RBP17.6■□□□□ 0.41
HLA-DQB2-231ENST00000435145 UBE4BO95155 1302 aa17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 SHOX2O60902 331 aaPredicted RBP17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 GLI1P08151 1106 aa17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 ZBTB48P10074 688 aaPredicted RBP17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 ZNF131P52739 623 aa17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 DCAF17Q5H9S7 520 aaPredicted RBP17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 ALS2CLQ60I27 953 aa17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 IFT20Q8IY31 132 aa17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 SPICE1Q8N0Z3 855 aa17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 GOLGA6L1Q8N7Z2 621 aa17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 MKNK1Q9BUB5 465 aa17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 FRMPD4Q14CM0 1322 aa17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 ECE1P42892 770 aa17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 CTTNQ14247 550 aaKnown RBP17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 ENOX2Q16206 610 aaKnown RBP17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 LRCH2Q5VUJ6 765 aa17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 LRRC31Q6UY01 552 aa17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 TSEN2Q8NCE0 465 aaKnown RBP17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 OLIG1Q8TAK6 271 aa17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 RANBP17Q9H2T7 1088 aaKnown RBP17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 ARHGEF10LQ9HCE6 1279 aa17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 SEL1LQ9UBV2 794 aa17.59■□□□□ 0.41
HLA-DQB2-231ENST00000435145 YDJCA8MPS7 323 aa17.58■□□□□ 0.4
HLA-DQB2-231ENST00000435145 IFI16Q16666 785 aaKnown RBP17.58■□□□□ 0.4
HLA-DQB2-231ENST00000435145 MSL1Q68DK7 614 aa17.58■□□□□ 0.4
HLA-DQB2-231ENST00000435145 ALKBH5Q6P6C2 394 aaKnown RBP17.58■□□□□ 0.4
HLA-DQB2-231ENST00000435145 B3GNT9Q6UX72 402 aa17.58■□□□□ 0.4
HLA-DQB2-231ENST00000435145 USP38Q8NB14 1042 aa17.58■□□□□ 0.4
HLA-DQB2-231ENST00000435145 ACER1Q8TDN7 264 aa17.58■□□□□ 0.4
HLA-DQB2-231ENST00000435145 PIGOQ8TEQ8 1089 aa17.58■□□□□ 0.4
HLA-DQB2-231ENST00000435145 DYDC2Q96IM9 177 aa17.58■□□□□ 0.4
HLA-DQB2-231ENST00000435145 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.58■□□□□ 0.4
HLA-DQB2-231ENST00000435145 GCNT4Q9P109 453 aa17.58■□□□□ 0.4
HLA-DQB2-231ENST00000435145 INTUQ9ULD6 942 aa17.58■□□□□ 0.4
HLA-DQB2-231ENST00000435145 A0A0A6YYK5 440 aaPredicted RBP17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 GCOM1H8Y6P7 765 aaPredicted RBP17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 CLIC2O15247 247 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 PLA2G6O60733 806 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 FLOT1O75955 427 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 GFPT2O94808 682 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 FAM13AO94988 1023 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 KIF4AO95239 1232 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 POLR2MP0CAP2 368 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 PRELPP51888 382 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 SLFN11Q7Z7L1 901 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 MREGQ8N565 214 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 CNKSR1Q969H4 720 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 DMAC2Q9NW81 257 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 PACSIN2Q9UNF0 486 aaPredicted RBP17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 SMCHD1A6NHR9 2005 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 GOLGA8KD6RF30 607 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 VIL1P09327 827 aaKnown RBP17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 PSMC2P35998 433 aaKnown RBP17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 RPS6KA1Q15418 735 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 FAM76AQ8TAV0 307 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 PBKQ96KB5 322 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 PARVGQ9HBI0 331 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 POLD4Q9HCU8 107 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 KCND2Q9NZV8 630 aa17.57■□□□□ 0.4
HLA-DQB2-231ENST00000435145 PSME4Q14997 1843 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 SHTN1A0MZ66 631 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 GOLGA6CA6NDK9 693 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 SFI1A8K8P3 1242 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 DDX3XO00571 662 aaKnown RBP eCLIP17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 OPA1O60313 960 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 HEXIM1O94992 359 aaKnown RBP17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 CFBP00751 764 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 GOLGA6DP0CG33 693 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 FERP16591 822 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 NMT1P30419 496 aaKnown RBP17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 PAK2Q13177 524 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 TCERG1LQ5VWI1 586 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 ZNF720Q7Z2F6 126 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 TPH2Q8IWU9 490 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 FAM186BQ8IYM0 893 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 TPCN2Q8NHX9 752 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 DEFB129Q9H1M3 183 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 GOPCQ9HD26 462 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 GOLGA6AQ9NYA3 693 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 PCDHB13Q9Y5F0 798 aa17.56■□□□□ 0.4
HLA-DQB2-231ENST00000435145 SPDYE2BA6NHP3 402 aa17.55■□□□□ 0.4
HLA-DQB2-231ENST00000435145 BHMG1C9JSJ3 638 aaPredicted RBP17.55■□□□□ 0.4
HLA-DQB2-231ENST00000435145 SPDYE6P0CI01 402 aa17.55■□□□□ 0.4
HLA-DQB2-231ENST00000435145 CARSP49589 748 aaKnown RBP17.55■□□□□ 0.4
HLA-DQB2-231ENST00000435145 SF3B2Q13435 895 aaKnown RBP17.55■□□□□ 0.4
HLA-DQB2-231ENST00000435145 CEP55Q53EZ4 464 aa17.55■□□□□ 0.4
HLA-DQB2-231ENST00000435145 SLC30A10Q6XR72 485 aa17.55■□□□□ 0.4
HLA-DQB2-231ENST00000435145 MYCT1Q8N699 235 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms