RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 WHAMMP3Q1A5X7 153 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 ARSHQ5FYA8 562 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 KIFC3Q9BVG8 833 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 RNF181Q9P0P0 153 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 GABBR1Q9UBS5 961 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 POTEB2H3BUK9 544 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 C2orf54Q08AI8 447 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 SWSAP1Q6NVH7 229 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 PDXDC1Q6P996 788 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 MOXD1Q6UVY6 613 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 PPM1KQ8N3J5 372 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 IFT81Q8WYA0 676 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 OTUD5Q96G74 571 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 SCLT1Q96NL6 688 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 PACSIN2Q9UNF0 486 aaPredicted RBP13.3□□□□□ -0.28
CLDN4-203ENST00000435050 NOVP48745 357 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 HERVK_113P62684 666 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 SEMA3FQ13275 785 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 PPP4R3CPQ6ZMV5 832 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 RABGGTAQ92696 567 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 TUFT1Q9NNX1 390 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 KRT5P13647 590 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 GCLMP48507 274 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 MYL7Q01449 175 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 GNPTABQ3T906 1256 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 KLHL7Q8IXQ5 586 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 DNAJC7Q99615 494 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 SUGCTQ9HAC7 445 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 SMARCAL1Q9NZC9 954 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 CEP72Q9P209 647 aa13.3□□□□□ -0.28
CLDN4-203ENST00000435050 LRRIQ4A6NIV6 560 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 EIF3CLB5ME19 914 aaKnown RBP13.29□□□□□ -0.28
CLDN4-203ENST00000435050 PEX10O60683 326 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 AKAP3O75969 853 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 BTNL9Q6UXG8 535 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 SYTL5Q8TDW5 730 aaPredicted RBP13.29□□□□□ -0.28
CLDN4-203ENST00000435050 POMGNT1Q8WZA1 660 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 SAAL1Q96ER3 474 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 ZNF668Q96K58 619 aaPredicted RBP13.29□□□□□ -0.28
CLDN4-203ENST00000435050 IFT74Q96LB3 600 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 EIF3CQ99613 913 aaKnown RBP13.29□□□□□ -0.28
CLDN4-203ENST00000435050 NUCKS1Q9H1E3 243 aaKnown RBP13.29□□□□□ -0.28
CLDN4-203ENST00000435050 RANBP17Q9H2T7 1088 aaKnown RBP13.29□□□□□ -0.28
CLDN4-203ENST00000435050 ARHGAP20Q9P2F6 1191 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 FHOD1Q9Y613 1164 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 RREB1Q92766 1687 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 HNRNPDLO14979 420 aaKnown RBP13.29□□□□□ -0.28
CLDN4-203ENST00000435050 SERPING1P05155 500 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 NR3C2P08235 984 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 IBSPP21815 317 aaPredicted RBP13.29□□□□□ -0.28
CLDN4-203ENST00000435050 CCND2P30279 289 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 PPARDQ03181 441 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 DMP1Q13316 513 aaPredicted RBP13.29□□□□□ -0.28
CLDN4-203ENST00000435050 TKFCQ3LXA3 575 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 WDR59Q6PJI9 974 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 LRRC55Q6ZSA7 311 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 GLG1Q92896 1179 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 IQCDQ96DY2 449 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 ZHX1Q9UKY1 873 aaPredicted RBP13.29□□□□□ -0.28
CLDN4-203ENST00000435050 PITPNM2Q9BZ72 1349 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 NFKBIEO00221 500 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 EDIL3O43854 480 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 CEP104O60308 925 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 DDNO94850 711 aaPredicted RBP13.29□□□□□ -0.28
CLDN4-203ENST00000435050 YWHABP31946 246 aaKnown RBP13.29□□□□□ -0.28
CLDN4-203ENST00000435050 OTUD6AQ7L8S5 288 aa13.29□□□□□ -0.28
CLDN4-203ENST00000435050 POLR3CQ9BUI4 534 aaPredicted RBP13.29□□□□□ -0.28
CLDN4-203ENST00000435050 PDXKO00764 312 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 ITGB5P18084 799 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 SOX10P56693 466 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 NFRKBQ6P4R8 1299 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 CYFIP1Q7L576 1253 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 KMT5AQ9NQR1 393 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 MYO1AQ9UBC5 1043 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 PPP1R9AQ9ULJ8 1098 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 CYP3A7-CYP3A51PA0A087WV96 503 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 WDR64B1ANS9 1081 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 CYP3A7P24462 503 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 MARK3P27448 753 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 POLGP54098 1239 aaPredicted RBP13.28□□□□□ -0.28
CLDN4-203ENST00000435050 LLGL1Q15334 1064 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 ADAT2Q7Z6V5 191 aaKnown RBP13.28□□□□□ -0.28
CLDN4-203ENST00000435050 NLGN2Q8NFZ4 835 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 TRPM4Q8TD43 1214 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 GMLQ99445 158 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 ST7Q9NRC1 585 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 SLX4Q8IY92 1834 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 KCNK3O14649 394 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 BACE1P56817 501 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 MAP9Q49MG5 647 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 SCYL3Q8IZE3 742 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 FNBP1Q96RU3 617 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 GOLPH3Q9H4A6 298 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 PLAGL2Q9UPG8 496 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 TISP43B9A030 160 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 NOP56O00567 594 aaKnown RBP13.28□□□□□ -0.28
CLDN4-203ENST00000435050 OPLAHO14841 1288 aa13.28□□□□□ -0.28
CLDN4-203ENST00000435050 APOBEC3FQ8IUX4 373 aaKnown RBP13.28□□□□□ -0.28
CLDN4-203ENST00000435050 NSUN6Q8TEA1 469 aaKnown RBP13.28□□□□□ -0.28
CLDN4-203ENST00000435050 ACCSQ96QU6 501 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms