RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 SETDB1Q15047 1291 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 DCAF17Q5H9S7 520 aaPredicted RBP8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 SLC27A3Q5K4L6 730 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 FAM83BQ5T0W9 1011 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 AGBL2Q5U5Z8 902 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 PDXDC1Q6P996 788 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 TMED8Q6PL24 325 aaPredicted RBP8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 LONP2Q86WA8 852 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 ERICH1Q86X53 443 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 SLC17A8Q8NDX2 589 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 PIK3R5Q8WYR1 880 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 CCT6BQ92526 530 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 ERGIC2Q96RQ1 377 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 RIOK1Q9BRS2 568 aaKnown RBP8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 RAB17Q9H0T7 212 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 STMN4Q9H169 189 aaPredicted RBP8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 NUCKS1Q9H1E3 243 aaKnown RBP8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 SERPINB13Q9UIV8 391 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 RASAL2Q9UJF2 1139 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 A8MUI8 341 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 RHOBTB3O94955 611 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 FGGP02679 453 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 CCND1P24385 295 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 COPB2P35606 906 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 TRAPPC10P48553 1259 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 ADCY7P51828 1080 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 RAD23BP54727 409 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 ADCY2Q08462 1091 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 C12orf60Q5U649 245 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 TAOK1Q7L7X3 1001 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 PURBQ96QR8 312 aaKnown RBP8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 COA1Q9GZY4 146 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 ETNK1Q9HBU6 452 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 FAM114A2Q9NRY5 505 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 HOMER3Q9NSC5 361 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 FGFR1OP2Q9NVK5 253 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 KLHL14Q9P2G3 628 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 DAAM1Q9Y4D1 1078 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 CRYBG1Q9Y4K1 1723 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 PPIP5K2O43314 1243 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 ITGA4P13612 1032 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 NPR1P16066 1061 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 STX2P32856 288 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 PPP1R2P41236 205 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 PDE6CP51160 858 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 C3orf20Q8ND61 904 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 U2AF1L4Q8WU68 220 aaKnown RBP8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 FAM129AQ9BZQ8 928 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 ZCWPW1Q9H0M4 648 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 TAOK3Q9H2K8 898 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 TMEM60Q9H2L4 133 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 CPVLQ9H3G5 476 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 PAPOLBQ9NRJ5 636 aaKnown RBP8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 ZFATQ9P243 1243 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 PCDHA4Q9UN74 947 aa8.03□□□□□ -1.12
SYNPO2-203ENST00000434046 A0A087X0T9 212 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 A0A1W2PRG0 241 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 RASSF10A6NK89 507 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 TCP11X1B4DZS4 312 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 SMIM22K7EJ46 135 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 FAM228BP0C875 321 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 GHRP10912 638 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 TNFRSF8P28908 595 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 ZRSR2Q15696 482 aaKnown RBP8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 PKN1Q16512 942 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 ARL6IP4Q66PJ3 421 aaKnown RBP8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 GALNT17Q6IS24 598 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 ZNF449Q6P9G9 518 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 ZNF662Q6ZS27 426 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 LARGE2Q8N3Y3 721 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 MREGQ8N565 214 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 TMEM47Q9BQJ4 181 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 LRRC27Q9C0I9 530 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 VCXQ9H320 206 aa8.02□□□□□ -1.12
SYNPO2-203ENST00000434046 A0A1W2PQJ5 194 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 STXBP3O00186 592 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 EIF3BP55884 814 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 IL17AQ16552 155 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 ANKRD20A2Q5SQ80 823 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 ANKRD20A1Q5TYW2 823 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 ANKRD20A3Q5VUR7 823 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 FAM47EQ6ZV65 393 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 SRBD1Q8N5C6 995 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 MAGEC3Q8TD91 643 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 TEKT4Q8WW24 435 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 ARHGEF2Q92974 986 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 PBKQ96KB5 322 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 PAGR1Q9BTK6 254 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 TRIM9Q9C026 710 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 SLC12A6Q9UHW9 1150 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 ANAPC4Q9UJX5 808 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 DBR1Q9UK59 544 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 AMFRQ9UKV5 643 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 COL22A1Q8NFW1 1626 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 MYH15Q9Y2K3 1946 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 RASGRF2O14827 1237 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 RXRBP28702 533 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 PAPOLAP51003 745 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 PMS2P54278 862 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms