RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 LAMA2P24043 3122 aaKnown RBP21.25■□□□□ 0.99
RPUSD3-207ENST00000433555 SMIM35A0A1B0GVV1 85 aa21.24■□□□□ 0.99
RPUSD3-207ENST00000433555 VPS37CA5D8V6 355 aaPredicted RBP21.24■□□□□ 0.99
RPUSD3-207ENST00000433555 PSMC5P62195 406 aa21.24■□□□□ 0.99
RPUSD3-207ENST00000433555 CTTNQ14247 550 aaKnown RBP21.24■□□□□ 0.99
RPUSD3-207ENST00000433555 MTERF2Q49AM1 385 aa21.24■□□□□ 0.99
RPUSD3-207ENST00000433555 ANO5Q75V66 913 aa21.24■□□□□ 0.99
RPUSD3-207ENST00000433555 HSCBQ8IWL3 235 aa21.24■□□□□ 0.99
RPUSD3-207ENST00000433555 TNPO1Q92973 898 aaKnown RBP21.24■□□□□ 0.99
RPUSD3-207ENST00000433555 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.24■□□□□ 0.99
RPUSD3-207ENST00000433555 PCDHA12Q9UN75 941 aa21.24■□□□□ 0.99
RPUSD3-207ENST00000433555 ZBBXA8MT70 800 aa21.23■□□□□ 0.99
RPUSD3-207ENST00000433555 QARSP47897 775 aaKnown RBP21.23■□□□□ 0.99
RPUSD3-207ENST00000433555 CLCN3P51790 818 aa21.23■□□□□ 0.99
RPUSD3-207ENST00000433555 MKRN4PQ13434 485 aaPredicted RBP21.23■□□□□ 0.99
RPUSD3-207ENST00000433555 XKR3Q5GH77 459 aa21.23■□□□□ 0.99
RPUSD3-207ENST00000433555 CNKSR3Q6P9H4 555 aa21.23■□□□□ 0.99
RPUSD3-207ENST00000433555 FERMT3Q86UX7 667 aa21.23■□□□□ 0.99
RPUSD3-207ENST00000433555 KIAA0319LQ8IZA0 1049 aa21.23■□□□□ 0.99
RPUSD3-207ENST00000433555 LRRC71Q8N4P6 559 aa21.23■□□□□ 0.99
RPUSD3-207ENST00000433555 PPP1R16BQ96T49 567 aa21.23■□□□□ 0.99
RPUSD3-207ENST00000433555 EIF2AK1Q9BQI3 630 aaKnown RBP21.23■□□□□ 0.99
RPUSD3-207ENST00000433555 NIFKQ9BYG3 293 aaKnown RBP21.23■□□□□ 0.99
RPUSD3-207ENST00000433555 PARNO95453 639 aaKnown RBP21.22■□□□□ 0.99
RPUSD3-207ENST00000433555 P4HBP07237 508 aaKnown RBP21.22■□□□□ 0.99
RPUSD3-207ENST00000433555 GHRP10912 638 aa21.22■□□□□ 0.99
RPUSD3-207ENST00000433555 SYT1P21579 422 aa21.22■□□□□ 0.99
RPUSD3-207ENST00000433555 LPIN1Q14693 890 aa21.22■□□□□ 0.99
RPUSD3-207ENST00000433555 PLEKHG4Q58EX7 1191 aa21.22■□□□□ 0.99
RPUSD3-207ENST00000433555 ZNF579Q8NAF0 562 aaKnown RBP21.22■□□□□ 0.99
RPUSD3-207ENST00000433555 DBF4BQ8NFT6 615 aa21.22■□□□□ 0.99
RPUSD3-207ENST00000433555 CEP131Q9UPN4 1083 aa21.22■□□□□ 0.99
RPUSD3-207ENST00000433555 TRPV2Q9Y5S1 764 aa21.22■□□□□ 0.99
RPUSD3-207ENST00000433555 DDX11L8A8MPP1 907 aa21.21■□□□□ 0.99
RPUSD3-207ENST00000433555 ZBTB39O15060 712 aa21.21■□□□□ 0.99
RPUSD3-207ENST00000433555 PBX2P40425 430 aa21.21■□□□□ 0.99
RPUSD3-207ENST00000433555 NPEPPSP55786 919 aa21.21■□□□□ 0.99
RPUSD3-207ENST00000433555 DEFB103AP81534 67 aa21.21■□□□□ 0.99
RPUSD3-207ENST00000433555 PTGDRQ13258 359 aa21.21■□□□□ 0.99
RPUSD3-207ENST00000433555 DRP2Q13474 957 aa21.21■□□□□ 0.99
RPUSD3-207ENST00000433555 FBXO47Q5MNV8 452 aa21.21■□□□□ 0.99
RPUSD3-207ENST00000433555 RSPH3Q86UC2 560 aa21.21■□□□□ 0.99
RPUSD3-207ENST00000433555 NRBP2Q9NSY0 501 aa21.21■□□□□ 0.99
RPUSD3-207ENST00000433555 SLITRK3O94933 977 aa21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 VTNP04004 478 aa21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 ACTN1P12814 892 aa21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 TECP42680 631 aa21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 WDR5P61964 334 aaKnown RBP21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 SMAD3P84022 425 aaKnown RBP21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 RESTQ13127 1097 aa21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 IL17AQ16552 155 aa21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 RILPL1Q5EBL4 403 aa21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 TMCO2Q7Z6W1 182 aaPredicted RBP21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 C4orf19Q8IY42 314 aa21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 METTL13Q8N6R0 699 aa21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 HSD17B14Q9BPX1 270 aa21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 AGO3Q9H9G7 860 aaKnown RBP21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 CDHR5Q9HBB8 845 aa21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 MTMR6Q9Y217 621 aa21.2■□□□□ 0.98
RPUSD3-207ENST00000433555 MED24O75448 989 aa21.19■□□□□ 0.98
RPUSD3-207ENST00000433555 BAIAP3O94812 1187 aa21.19■□□□□ 0.98
RPUSD3-207ENST00000433555 SPATA31C1P0DKV0 1188 aa21.19■□□□□ 0.98
RPUSD3-207ENST00000433555 EFCAB12Q6NXP0 572 aa21.19■□□□□ 0.98
RPUSD3-207ENST00000433555 TMEM40Q8WWA1 233 aa21.19■□□□□ 0.98
RPUSD3-207ENST00000433555 MTIF3Q9H2K0 278 aaKnown RBP21.19■□□□□ 0.98
RPUSD3-207ENST00000433555 SLC4A7Q9Y6M7 1214 aa21.19■□□□□ 0.98
RPUSD3-207ENST00000433555 KDM3AQ9Y4C1 1321 aa21.19■□□□□ 0.98
RPUSD3-207ENST00000433555 COL4A6Q14031 1691 aa21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 A0A087WWV3 80 aa21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 MAGEB2O15479 319 aa21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 PDCP20941 246 aa21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 YWHABP31946 246 aaKnown RBP21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 FXR2P51116 673 aaKnown RBP eCLIP21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 RABGGTBP53611 331 aa21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 ATP2C1P98194 919 aaPredicted RBP21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 TBC1D8BQ0IIM8 1120 aa21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 Q7L0L9 218 aa21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 TPH2Q8IWU9 490 aa21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 NEK9Q8TD19 979 aa21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 ZNF668Q96K58 619 aaPredicted RBP21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 PBX4Q9BYU1 374 aa21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 IFIH1Q9BYX4 1025 aaKnown RBP21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 CELF4Q9BZC1 486 aaKnown RBP21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 ZSWIM4Q9H7M6 989 aa21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 CYP26B1Q9NR63 512 aa21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 BMP2KQ9NSY1 1161 aaPredicted RBP21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 YBX2Q9Y2T7 364 aaKnown RBP21.18■□□□□ 0.98
RPUSD3-207ENST00000433555 IGKV6-21A0A0C4DH24 114 aa21.17■□□□□ 0.98
RPUSD3-207ENST00000433555 PP2D1A8MPX8 630 aa21.17■□□□□ 0.98
RPUSD3-207ENST00000433555 LYPLA2O95372 231 aa21.17■□□□□ 0.98
RPUSD3-207ENST00000433555 RPLP2P05387 115 aaKnown RBP21.17■□□□□ 0.98
RPUSD3-207ENST00000433555 ATP2A2P16615 1042 aaKnown RBP21.17■□□□□ 0.98
RPUSD3-207ENST00000433555 CD52P31358 61 aa21.17■□□□□ 0.98
RPUSD3-207ENST00000433555 KIZQ2M2Z5 673 aa21.17■□□□□ 0.98
RPUSD3-207ENST00000433555 IER5Q5VY09 327 aa21.17■□□□□ 0.98
RPUSD3-207ENST00000433555 FAM173BQ6P4H8 233 aa21.17■□□□□ 0.98
RPUSD3-207ENST00000433555 TSHZ1Q6ZSZ6 1077 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms