RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 IKBKBO14920 756 aa10.72□□□□□ -0.69
FN1-209ENST00000432072 DYNLT1P63172 113 aa10.72□□□□□ -0.69
FN1-209ENST00000432072 STAG1Q8WVM7 1258 aa10.72□□□□□ -0.69
FN1-209ENST00000432072 SLC9A2Q9UBY0 812 aa10.72□□□□□ -0.69
FN1-209ENST00000432072 FBXL21Q9UKT6 434 aa10.72□□□□□ -0.69
FN1-209ENST00000432072 HMGB1P1B2RPK0 211 aaPredicted RBP10.72□□□□□ -0.69
FN1-209ENST00000432072 IPO5O00410 1097 aaKnown RBP10.72□□□□□ -0.69
FN1-209ENST00000432072 SKIP12755 728 aa10.72□□□□□ -0.69
FN1-209ENST00000432072 CAPN12Q6ZSI9 719 aa10.72□□□□□ -0.69
FN1-209ENST00000432072 EFHBQ8N7U6 833 aa10.72□□□□□ -0.69
FN1-209ENST00000432072 SSH2Q76I76 1423 aa10.72□□□□□ -0.69
FN1-209ENST00000432072 IGFBP4P22692 258 aa10.71□□□□□ -0.69
FN1-209ENST00000432072 CASP2P42575 452 aa10.71□□□□□ -0.69
FN1-209ENST00000432072 PTPN12Q05209 780 aaKnown RBP10.71□□□□□ -0.69
FN1-209ENST00000432072 TMEM62Q0P6H9 643 aa10.71□□□□□ -0.69
FN1-209ENST00000432072 ERICH1Q86X53 443 aa10.71□□□□□ -0.69
FN1-209ENST00000432072 SH3GLB2Q9NR46 395 aa10.71□□□□□ -0.69
FN1-209ENST00000432072 TRIM17Q9Y577 477 aa10.71□□□□□ -0.69
FN1-209ENST00000432072 DIP2AQ14689 1571 aa10.71□□□□□ -0.69
FN1-209ENST00000432072 CLCA2Q9UQC9 943 aa10.71□□□□□ -0.69
FN1-209ENST00000432072 SNAP23O00161 211 aa10.71□□□□□ -0.69
FN1-209ENST00000432072 GLYCTKQ8IVS8 523 aa10.71□□□□□ -0.69
FN1-209ENST00000432072 ERO1AQ96HE7 468 aa10.71□□□□□ -0.69
FN1-209ENST00000432072 SUCLA2Q9P2R7 463 aaPredicted RBP10.71□□□□□ -0.69
FN1-209ENST00000432072 PTPN22Q9Y2R2 807 aa10.71□□□□□ -0.69
FN1-209ENST00000432072 GTF2F1P35269 517 aaKnown RBP eCLIP10.71□□□□□ -0.694e-10■■■■□ 25.6
FN1-209ENST00000432072 FKBP3Q00688 224 aaKnown RBP10.71□□□□□ -0.69
FN1-209ENST00000432072 ACBD5Q5T8D3 534 aaPredicted RBP10.71□□□□□ -0.69
FN1-209ENST00000432072 MCUQ8NE86 351 aa10.71□□□□□ -0.69
FN1-209ENST00000432072 POLR3FQ9H1D9 316 aaPredicted RBP10.71□□□□□ -0.69
FN1-209ENST00000432072 SP110Q9HB58 689 aa10.71□□□□□ -0.69
FN1-209ENST00000432072 LRRC41Q15345 812 aa10.71□□□□□ -0.7
FN1-209ENST00000432072 TMEM169Q96HH4 297 aa10.71□□□□□ -0.7
FN1-209ENST00000432072 EFCC1Q9HA90 598 aa10.71□□□□□ -0.7
FN1-209ENST00000432072 NGRNQ9NPE2 291 aaKnown RBP10.71□□□□□ -0.7
FN1-209ENST00000432072 POLR3EQ9NVU0 708 aa10.71□□□□□ -0.7
FN1-209ENST00000432072 PRPF3O43395 683 aaKnown RBP10.71□□□□□ -0.7
FN1-209ENST00000432072 INHBAP08476 426 aa10.71□□□□□ -0.7
FN1-209ENST00000432072 COG7P83436 770 aa10.71□□□□□ -0.7
FN1-209ENST00000432072 MMEL1Q495T6 779 aa10.71□□□□□ -0.7
FN1-209ENST00000432072 TOGARAM2Q6ZUX3 1019 aa10.71□□□□□ -0.7
FN1-209ENST00000432072 SLC44A5Q8NCS7 719 aa10.71□□□□□ -0.7
FN1-209ENST00000432072 CDC26Q8NHZ8 85 aa10.71□□□□□ -0.7
FN1-209ENST00000432072 BHMT2Q9H2M3 363 aa10.71□□□□□ -0.7
FN1-209ENST00000432072 H7C1W4 665 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 BUB1O43683 1085 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 APOEP02649 317 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 PLCG1P19174 1290 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 STAT5BP51692 787 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 TKFCQ3LXA3 575 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 JADE1Q6IE81 842 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 KLC3Q6P597 504 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 CCDC13Q8IYE1 715 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.7□□□□□ -0.7
FN1-209ENST00000432072 CDHR2Q9BYE9 1310 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 STXBP3O00186 592 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 THPOP40225 353 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 HDXQ7Z353 690 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 OSBP2Q969R2 916 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 PBXIP1Q96AQ6 731 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 NUDCD1Q96RS6 583 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 PLEKHF1Q96S99 279 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 TMEM39BQ9GZU3 492 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 OSBPL5Q9H0X9 879 aaPredicted RBP10.7□□□□□ -0.7
FN1-209ENST00000432072 KIAA1468Q9P260 1216 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 CLIC4Q9Y696 253 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 TECPR2O15040 1411 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 SH2B2O14492 632 aaPredicted RBP10.7□□□□□ -0.7
FN1-209ENST00000432072 MAP3K13O43283 966 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 PSMA2P25787 234 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 DGKHQ86XP1 1220 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 AGBL3Q8NEM8 1001 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 TRIM58Q8NG06 486 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 MANSC4A6NHS7 340 aaPredicted RBP10.7□□□□□ -0.7
FN1-209ENST00000432072 PDE1BQ01064 536 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 NME3Q13232 169 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 NOLC1Q14978 699 aaKnown RBP eCLIP10.7□□□□□ -0.76e-51■□□□□ 11.3
FN1-209ENST00000432072 ZNF394Q53GI3 561 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 USP17L6PQ6QN14 398 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 LDHDQ86WU2 507 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 AFDNP55196 1824 aaKnown RBP10.7□□□□□ -0.7
FN1-209ENST00000432072 CCDC15Q0P6D6 951 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 NR1H3Q13133 447 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 MARCH10Q8NA82 808 aaPredicted RBP10.7□□□□□ -0.7
FN1-209ENST00000432072 FAM76AQ8TAV0 307 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 ZNF560Q96MR9 790 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 TMEM47Q9BQJ4 181 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 SPON2Q9BUD6 331 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 EMILIN3Q9NT22 766 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 ITGA4P13612 1032 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 CACNB2Q08289 660 aaPredicted RBP10.7□□□□□ -0.7
FN1-209ENST00000432072 BFSP2Q13515 415 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 SH3KBP1Q96B97 665 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 DHTKD1Q96HY7 919 aaPredicted RBP10.7□□□□□ -0.7
FN1-209ENST00000432072 TMEM39AQ9NV64 488 aa10.7□□□□□ -0.7
FN1-209ENST00000432072 MMP1P03956 469 aa10.69□□□□□ -0.7
FN1-209ENST00000432072 GCLCP48506 637 aaPredicted RBP10.69□□□□□ -0.7
FN1-209ENST00000432072 PRKCQQ04759 706 aa10.69□□□□□ -0.7
FN1-209ENST00000432072 MXD4Q14582 209 aaPredicted RBP10.69□□□□□ -0.7
FN1-209ENST00000432072 ARHGEF2Q92974 986 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms