RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 RSPH10B2B2RC85 870 aa20.81■□□□□ 0.92
DDR1-236ENST00000431373 RSPH10BP0C881 870 aa20.81■□□□□ 0.92
DDR1-236ENST00000431373 EPHB4P54760 987 aa20.81■□□□□ 0.92
DDR1-236ENST00000431373 IL17AQ16552 155 aa20.81■□□□□ 0.92
DDR1-236ENST00000431373 FOXD4L5Q5VV16 416 aaPredicted RBP20.81■□□□□ 0.92
DDR1-236ENST00000431373 TRAF7Q6Q0C0 670 aa20.81■□□□□ 0.92
DDR1-236ENST00000431373 ANO5Q75V66 913 aa20.81■□□□□ 0.92
DDR1-236ENST00000431373 RPUSD2Q8IZ73 545 aaKnown RBP20.81■□□□□ 0.92
DDR1-236ENST00000431373 FOXD4L4Q8WXT5 416 aaPredicted RBP20.81■□□□□ 0.92
DDR1-236ENST00000431373 POLR3CQ9BUI4 534 aaPredicted RBP20.81■□□□□ 0.92
DDR1-236ENST00000431373 FAM49AQ9H0Q0 323 aaPredicted RBP20.81■□□□□ 0.92
DDR1-236ENST00000431373 TUFT1Q9NNX1 390 aa20.81■□□□□ 0.92
DDR1-236ENST00000431373 STK24Q9Y6E0 443 aa20.81■□□□□ 0.92
DDR1-236ENST00000431373 TET1Q8NFU7 2136 aa20.81■□□□□ 0.92
DDR1-236ENST00000431373 LYPLA2O95372 231 aa20.8■□□□□ 0.92
DDR1-236ENST00000431373 F13A1P00488 732 aa20.8■□□□□ 0.92
DDR1-236ENST00000431373 CTSHP09668 335 aa20.8■□□□□ 0.92
DDR1-236ENST00000431373 YWHABP31946 246 aaKnown RBP20.8■□□□□ 0.92
DDR1-236ENST00000431373 TBC1D8BQ0IIM8 1120 aa20.8■□□□□ 0.92
DDR1-236ENST00000431373 PKP1Q13835 747 aa20.8■□□□□ 0.92
DDR1-236ENST00000431373 FAM26DQ5JW98 314 aa20.8■□□□□ 0.92
DDR1-236ENST00000431373 HAUS3Q68CZ6 603 aa20.8■□□□□ 0.92
DDR1-236ENST00000431373 PLA2G4FQ68DD2 849 aa20.8■□□□□ 0.92
DDR1-236ENST00000431373 OTUD6AQ7L8S5 288 aa20.8■□□□□ 0.92
DDR1-236ENST00000431373 DEFB128Q7Z7B8 93 aa20.8■□□□□ 0.92
DDR1-236ENST00000431373 FTOQ9C0B1 505 aaKnown RBP eCLIP20.8■□□□□ 0.92
DDR1-236ENST00000431373 CLIC4Q9Y696 253 aa20.8■□□□□ 0.92
DDR1-236ENST00000431373 MED24O75448 989 aa20.79■□□□□ 0.92
DDR1-236ENST00000431373 PFKMP08237 780 aa20.79■□□□□ 0.92
DDR1-236ENST00000431373 SPATA31C1P0DKV0 1188 aa20.79■□□□□ 0.92
DDR1-236ENST00000431373 ACRP10323 421 aa20.79■□□□□ 0.92
DDR1-236ENST00000431373 RPA1P27694 616 aa20.79■□□□□ 0.92
DDR1-236ENST00000431373 PSRC1Q6PGN9 363 aaPredicted RBP20.79■□□□□ 0.92
DDR1-236ENST00000431373 CATSPER3Q86XQ3 398 aa20.79■□□□□ 0.92
DDR1-236ENST00000431373 NME8Q8N427 588 aa20.79■□□□□ 0.92
DDR1-236ENST00000431373 METTL13Q8N6R0 699 aa20.79■□□□□ 0.92
DDR1-236ENST00000431373 CEP89Q96ST8 783 aa20.79■□□□□ 0.92
DDR1-236ENST00000431373 SH2D3AQ9BRG2 576 aa20.79■□□□□ 0.92
DDR1-236ENST00000431373 CYP26B1Q9NR63 512 aa20.79■□□□□ 0.92
DDR1-236ENST00000431373 PPME1Q9Y570 386 aa20.79■□□□□ 0.92
DDR1-236ENST00000431373 A0A1W2PPC1 479 aa20.78■□□□□ 0.92
DDR1-236ENST00000431373 VWA3AA6NCI4 1184 aa20.78■□□□□ 0.92
DDR1-236ENST00000431373 MUTP22033 750 aa20.78■□□□□ 0.92
DDR1-236ENST00000431373 CCT6AP40227 531 aaKnown RBP20.78■□□□□ 0.92
DDR1-236ENST00000431373 NPEPPSP55786 919 aa20.78■□□□□ 0.92
DDR1-236ENST00000431373 MRPS6P82932 125 aaKnown RBP20.78■□□□□ 0.92
DDR1-236ENST00000431373 TMEM240Q5SV17 173 aa20.78■□□□□ 0.92
DDR1-236ENST00000431373 EFCAB12Q6NXP0 572 aa20.78■□□□□ 0.92
DDR1-236ENST00000431373 C16orf59Q7L2K0 433 aa20.78■□□□□ 0.92
DDR1-236ENST00000431373 KIAA0319LQ8IZA0 1049 aa20.78■□□□□ 0.92
DDR1-236ENST00000431373 TDHQ8IZJ6 230 aa20.78■□□□□ 0.92
DDR1-236ENST00000431373 SNX29Q8TEQ0 813 aa20.78■□□□□ 0.92
DDR1-236ENST00000431373 VWCEQ96DN2 955 aa20.78■□□□□ 0.92
DDR1-236ENST00000431373 CEP170P1Q96L14 293 aa20.78■□□□□ 0.92
DDR1-236ENST00000431373 USP28Q96RU2 1077 aa20.78■□□□□ 0.92
DDR1-236ENST00000431373 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.78■□□□□ 0.929e-7■■□□□ 11.7
DDR1-236ENST00000431373 ANKEF1Q9NU02 776 aa20.78■□□□□ 0.92
DDR1-236ENST00000431373 M0QZ92 97 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 ZBTB39O15060 712 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 NBNO60934 754 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 TMOD1P28289 359 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 CLCN3P51790 818 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 CEBPZQ03701 1054 aaKnown RBP20.77■□□□□ 0.92
DDR1-236ENST00000431373 MGAT3Q09327 533 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 MBTPS1Q14703 1052 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 GPNMBQ14956 572 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 PTPAQ15257 358 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 SHHQ15465 462 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 XKR9Q5GH70 373 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 C9orf50Q5SZB4 431 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 IER5Q5VY09 327 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 KRT79Q5XKE5 535 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 ZNF365Q70YC5 407 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 LINC01465Q8N7H1 131 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 ZNF396Q96N95 335 aaPredicted RBP20.77■□□□□ 0.92
DDR1-236ENST00000431373 JPH2Q9BR39 696 aaPredicted RBP20.77■□□□□ 0.92
DDR1-236ENST00000431373 CDY2AQ9Y6F7 541 aa20.77■□□□□ 0.92
DDR1-236ENST00000431373 PP2D1A8MPX8 630 aa20.76■□□□□ 0.91
DDR1-236ENST00000431373 FGBP02675 491 aa20.76■□□□□ 0.91
DDR1-236ENST00000431373 CHRNA1P02708 482 aa20.76■□□□□ 0.91
DDR1-236ENST00000431373 CXCL10P02778 98 aa20.76■□□□□ 0.91
DDR1-236ENST00000431373 XRCC6P12956 609 aaKnown RBP eCLIP20.76■□□□□ 0.91
DDR1-236ENST00000431373 RFC5P40937 340 aa20.76■□□□□ 0.91
DDR1-236ENST00000431373 POTEGQ6S5H5 508 aa20.76■□□□□ 0.91
DDR1-236ENST00000431373 EXOC8Q8IYI6 725 aa20.76■□□□□ 0.91
DDR1-236ENST00000431373 LRRC71Q8N4P6 559 aa20.76■□□□□ 0.91
DDR1-236ENST00000431373 ZNF579Q8NAF0 562 aaKnown RBP20.76■□□□□ 0.91
DDR1-236ENST00000431373 PIGOQ8TEQ8 1089 aa20.76■□□□□ 0.91
DDR1-236ENST00000431373 NACC1Q96RE7 527 aa20.76■□□□□ 0.91
DDR1-236ENST00000431373 MAP7D2Q96T17 732 aa20.76■□□□□ 0.91
DDR1-236ENST00000431373 SUGCTQ9HAC7 445 aa20.76■□□□□ 0.91
DDR1-236ENST00000431373 TRPV2Q9Y5S1 764 aa20.76■□□□□ 0.91
DDR1-236ENST00000431373 TRIOBPQ9H2D6 2365 aa20.75■□□□□ 0.91
DDR1-236ENST00000431373 IGKV6-21A0A0C4DH24 114 aa20.75■□□□□ 0.91
DDR1-236ENST00000431373 MAFO75444 373 aaPredicted RBP20.75■□□□□ 0.91
DDR1-236ENST00000431373 BRD1O95696 1058 aa20.75■□□□□ 0.91
DDR1-236ENST00000431373 CDC25AP30304 524 aa20.75■□□□□ 0.91
DDR1-236ENST00000431373 POLGP54098 1239 aaPredicted RBP20.75■□□□□ 0.91
DDR1-236ENST00000431373 TMEM62Q0P6H9 643 aa20.75■□□□□ 0.91
DDR1-236ENST00000431373 SLC7A3Q8WY07 619 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms