RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 POLNQ7Z5Q5 900 aa7.08□□□□□ -1.28
PTPN4-204ENST00000431283 FUKQ8N0W3 1084 aa7.08□□□□□ -1.28
PTPN4-204ENST00000431283 C2orf69Q8N8R5 385 aa7.08□□□□□ -1.28
PTPN4-204ENST00000431283 PMFBP1Q8TBY8 1022 aa7.08□□□□□ -1.28
PTPN4-204ENST00000431283 FAM89AQ96GI7 184 aa7.08□□□□□ -1.28
PTPN4-204ENST00000431283 GBP4Q96PP9 640 aa7.08□□□□□ -1.28
PTPN4-204ENST00000431283 Q9UFV3 132 aa7.08□□□□□ -1.28
PTPN4-204ENST00000431283 CYR61O00622 381 aa7.07□□□□□ -1.28
PTPN4-204ENST00000431283 RPS19P39019 145 aaKnown RBP7.07□□□□□ -1.28
PTPN4-204ENST00000431283 CD83Q01151 205 aa7.07□□□□□ -1.28
PTPN4-204ENST00000431283 MAP3K12Q12852 859 aa7.07□□□□□ -1.28
PTPN4-204ENST00000431283 NOLC1Q14978 699 aaKnown RBP eCLIP7.07□□□□□ -1.28
PTPN4-204ENST00000431283 EIF4HQ15056 248 aaKnown RBP7.07□□□□□ -1.28
PTPN4-204ENST00000431283 STILQ15468 1287 aa7.07□□□□□ -1.28
PTPN4-204ENST00000431283 NRN1LQ496H8 165 aa7.07□□□□□ -1.28
PTPN4-204ENST00000431283 USP30Q70CQ3 517 aa7.07□□□□□ -1.28
PTPN4-204ENST00000431283 GSTCDQ8NEC7 633 aa7.07□□□□□ -1.28
PTPN4-204ENST00000431283 THAP3Q8WTV1 239 aaPredicted RBP7.07□□□□□ -1.28
PTPN4-204ENST00000431283 ASB15Q8WXK1 588 aa7.07□□□□□ -1.28
PTPN4-204ENST00000431283 MKL1Q969V6 931 aa7.07□□□□□ -1.28
PTPN4-204ENST00000431283 KIAA1683Q9H0B3 1180 aa7.07□□□□□ -1.28
PTPN4-204ENST00000431283 MSL2Q9HCI7 577 aa7.07□□□□□ -1.28
PTPN4-204ENST00000431283 PRAMEF22A3QJZ6 481 aa7.06□□□□□ -1.28
PTPN4-204ENST00000431283 NPTXRO95502 500 aa7.06□□□□□ -1.28
PTPN4-204ENST00000431283 ACO1P21399 889 aaKnown RBP7.06□□□□□ -1.28
PTPN4-204ENST00000431283 HMGA2P52926 109 aa7.06□□□□□ -1.28
PTPN4-204ENST00000431283 NFYCQ13952 458 aa7.06□□□□□ -1.28
PTPN4-204ENST00000431283 TRIM61Q5EBN2 209 aa7.06□□□□□ -1.28
PTPN4-204ENST00000431283 AGBL4Q5VU57 503 aa7.06□□□□□ -1.28
PTPN4-204ENST00000431283 GRAMD4Q6IC98 578 aa7.06□□□□□ -1.28
PTPN4-204ENST00000431283 FILIP1Q7Z7B0 1213 aa7.06□□□□□ -1.28
PTPN4-204ENST00000431283 NOSTRINQ8IVI9 506 aa7.06□□□□□ -1.28
PTPN4-204ENST00000431283 SLC7A14Q8TBB6 771 aa7.06□□□□□ -1.28
PTPN4-204ENST00000431283 SORCS2Q96PQ0 1159 aa7.06□□□□□ -1.28
PTPN4-204ENST00000431283 MRPL4Q9BYD3 311 aaKnown RBP7.06□□□□□ -1.28
PTPN4-204ENST00000431283 OR10A2Q9H208 303 aa7.06□□□□□ -1.28
PTPN4-204ENST00000431283 ASB1Q9Y576 335 aa7.06□□□□□ -1.28
PTPN4-204ENST00000431283 MRE11P49959 708 aa7.05□□□□□ -1.28
PTPN4-204ENST00000431283 HHEXQ03014 270 aa7.05□□□□□ -1.28
PTPN4-204ENST00000431283 MOGSQ13724 837 aa7.05□□□□□ -1.28
PTPN4-204ENST00000431283 PCOLCEQ15113 449 aa7.05□□□□□ -1.28
PTPN4-204ENST00000431283 LRSAM1Q6UWE0 723 aa7.05□□□□□ -1.28
PTPN4-204ENST00000431283 BRAPQ7Z569 592 aa7.05□□□□□ -1.28
PTPN4-204ENST00000431283 ZFPM1Q8IX07 1006 aa7.05□□□□□ -1.28
PTPN4-204ENST00000431283 EDAQ92838 391 aa7.05□□□□□ -1.28
PTPN4-204ENST00000431283 ERCC4Q92889 916 aaPredicted RBP7.05□□□□□ -1.28
PTPN4-204ENST00000431283 PLA2G12BQ9BX93 195 aa7.05□□□□□ -1.28
PTPN4-204ENST00000431283 SCAND2PQ9GZW5 306 aaPredicted RBP7.05□□□□□ -1.28
PTPN4-204ENST00000431283 CSRNP2Q9H175 543 aa7.05□□□□□ -1.28
PTPN4-204ENST00000431283 SLC30A1Q9Y6M5 507 aa7.05□□□□□ -1.28
PTPN4-204ENST00000431283 APEX1P27695 318 aaKnown RBP7.04□□□□□ -1.28
PTPN4-204ENST00000431283 IRF9Q00978 393 aa7.04□□□□□ -1.28
PTPN4-204ENST00000431283 SEC23AQ15436 765 aa7.04□□□□□ -1.28
PTPN4-204ENST00000431283 LARP4Q71RC2 724 aaKnown RBP eCLIP7.04□□□□□ -1.28
PTPN4-204ENST00000431283 DDX53Q86TM3 631 aaKnown RBP7.04□□□□□ -1.28
PTPN4-204ENST00000431283 IGSF22Q8N9C0 903 aa7.04□□□□□ -1.28
PTPN4-204ENST00000431283 E2F7Q96AV8 911 aa7.04□□□□□ -1.28
PTPN4-204ENST00000431283 AMNQ9BXJ7 453 aa7.04□□□□□ -1.28
PTPN4-204ENST00000431283 B3GALT1Q9Y5Z6 326 aa7.04□□□□□ -1.28
PTPN4-204ENST00000431283 HS3ST3A1Q9Y663 406 aa7.04□□□□□ -1.28
PTPN4-204ENST00000431283 TCRBV16S1A1N1A0A5B0 115 aa7.03□□□□□ -1.28
PTPN4-204ENST00000431283 MPIG6BO95866 241 aa7.03□□□□□ -1.28
PTPN4-204ENST00000431283 USP39Q53GS9 565 aaKnown RBP7.03□□□□□ -1.28
PTPN4-204ENST00000431283 TMEM177Q53S58 311 aa7.03□□□□□ -1.28
PTPN4-204ENST00000431283 KANK2Q63ZY3 851 aa7.03□□□□□ -1.28
PTPN4-204ENST00000431283 TMEM200BQ69YZ2 307 aa7.03□□□□□ -1.28
PTPN4-204ENST00000431283 RNF207Q6ZRF8 634 aa7.03□□□□□ -1.28
PTPN4-204ENST00000431283 OVCH1Q7RTY7 1134 aa7.03□□□□□ -1.28
PTPN4-204ENST00000431283 OR14K1Q8NGZ2 314 aa7.03□□□□□ -1.28
PTPN4-204ENST00000431283 BOCQ9BWV1 1114 aa7.03□□□□□ -1.28
PTPN4-204ENST00000431283 NELFAQ9H3P2 528 aa7.03□□□□□ -1.28
PTPN4-204ENST00000431283 B4E1Z4 1266 aa7.02□□□□□ -1.29
PTPN4-204ENST00000431283 KRT37O76014 449 aa7.02□□□□□ -1.29
PTPN4-204ENST00000431283 SDHAP31040 664 aa7.02□□□□□ -1.29
PTPN4-204ENST00000431283 ACVRL1P37023 503 aa7.02□□□□□ -1.29
PTPN4-204ENST00000431283 STAT5BP51692 787 aa7.02□□□□□ -1.29
PTPN4-204ENST00000431283 FOXE3Q13461 319 aa7.02□□□□□ -1.29
PTPN4-204ENST00000431283 ARHGAP44Q17R89 818 aa7.02□□□□□ -1.29
PTPN4-204ENST00000431283 C2orf27AQ580R0 203 aa7.02□□□□□ -1.29
PTPN4-204ENST00000431283 TRIM68Q6AZZ1 485 aa7.02□□□□□ -1.29
PTPN4-204ENST00000431283 Q8N1X5 172 aa7.02□□□□□ -1.29
PTPN4-204ENST00000431283 SCLYQ96I15 445 aa7.02□□□□□ -1.29
PTPN4-204ENST00000431283 MRIQ9BWK5 157 aa7.02□□□□□ -1.29
PTPN4-204ENST00000431283 PTCH2Q9Y6C5 1203 aa7.02□□□□□ -1.29
PTPN4-204ENST00000431283 RB1CC1Q8TDY2 1594 aa7.01□□□□□ -1.29
PTPN4-204ENST00000431283 GOLGA6L22H0YM25 854 aa7.01□□□□□ -1.29
PTPN4-204ENST00000431283 MSX2P35548 267 aaPredicted RBP7.01□□□□□ -1.29
PTPN4-204ENST00000431283 TBR1Q16650 682 aa7.01□□□□□ -1.29
PTPN4-204ENST00000431283 DLG3Q92796 817 aa7.01□□□□□ -1.29
PTPN4-204ENST00000431283 NCOA5Q9HCD5 579 aaKnown RBP7.01□□□□□ -1.29
PTPN4-204ENST00000431283 PLA2G3Q9NZ20 509 aa7.01□□□□□ -1.29
PTPN4-204ENST00000431283 MATN2O00339 956 aa7□□□□□ -1.29
PTPN4-204ENST00000431283 KCNQ2O43526 872 aa7□□□□□ -1.29
PTPN4-204ENST00000431283 SESN2P58004 480 aaPredicted RBP7□□□□□ -1.29
PTPN4-204ENST00000431283 GRM7Q14831 915 aa7□□□□□ -1.29
PTPN4-204ENST00000431283 NFE2L2Q16236 605 aa7□□□□□ -1.29
PTPN4-204ENST00000431283 TM4SF20Q53R12 229 aa7□□□□□ -1.29
PTPN4-204ENST00000431283 CC2D1AQ6P1N0 951 aaPredicted RBP7□□□□□ -1.29
PTPN4-204ENST00000431283 FGD2Q7Z6J4 655 aa7□□□□□ -1.29
PTPN4-204ENST00000431283 SGMS1Q86VZ5 419 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms