RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 KCNH7Q9NS40 1196 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 SALL4Q9UJQ4 1053 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 FBXL5Q9UKA1 691 aa15.34■□□□□ 0.05
HOXC4-202ENST00000430889 GTPBP10A4D1E9 387 aaKnown RBP15.33■□□□□ 0.04
HOXC4-202ENST00000430889 SFI1A8K8P3 1242 aa15.33■□□□□ 0.04
HOXC4-202ENST00000430889 AKR1B10O60218 316 aa15.33■□□□□ 0.04
HOXC4-202ENST00000430889 LYPLA2O95372 231 aa15.33■□□□□ 0.04
HOXC4-202ENST00000430889 VCAM1P19320 739 aa15.33■□□□□ 0.04
HOXC4-202ENST00000430889 PON1P27169 355 aa15.33■□□□□ 0.04
HOXC4-202ENST00000430889 GMPSP49915 693 aaPredicted RBP15.33■□□□□ 0.04
HOXC4-202ENST00000430889 SLC9C1Q4G0N8 1177 aa15.33■□□□□ 0.04
HOXC4-202ENST00000430889 ZNF572Q7Z3I7 529 aaPredicted RBP15.33■□□□□ 0.04
HOXC4-202ENST00000430889 MICALL2Q8IY33 904 aa15.33■□□□□ 0.04
HOXC4-202ENST00000430889 TRIM58Q8NG06 486 aa15.33■□□□□ 0.04
HOXC4-202ENST00000430889 MKNK1Q9BUB5 465 aa15.33■□□□□ 0.04
HOXC4-202ENST00000430889 MLXIPQ9HAP2 919 aa15.33■□□□□ 0.04
HOXC4-202ENST00000430889 JADE2Q9NQC1 790 aa15.33■□□□□ 0.04
HOXC4-202ENST00000430889 MACROD2A1Z1Q3 448 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 PRLRP16471 622 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 MAGEA1P43355 309 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 GFPT1Q06210 699 aaPredicted RBP15.32■□□□□ 0.04
HOXC4-202ENST00000430889 KLHDC7AQ5VTJ3 777 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 MYCT1Q8N699 235 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 TMEM174Q8WUU8 243 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 MMS19Q96T76 1030 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 SGIP1Q9BQI5 828 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 MTFR1LQ9H019 292 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 IKZF4Q9H2S9 585 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 DEF6Q9H4E7 631 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 RAVER2Q9HCJ3 691 aaKnown RBP15.32■□□□□ 0.04
HOXC4-202ENST00000430889 HACL1Q9UJ83 578 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 NENFQ9UMX5 172 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 JRKLQ9Y4A0 524 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 LCTP09848 1927 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 KIAA1217Q5T5P2 1943 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 WDR90Q96KV7 1748 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 ARID2Q68CP9 1835 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 SRGAP2O75044 1071 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 TACC1O75410 805 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 EPB41P11171 864 aaKnown RBP15.32■□□□□ 0.04
HOXC4-202ENST00000430889 ACTN1P12814 892 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 XRCC5P13010 732 aaKnown RBP15.32■□□□□ 0.04
HOXC4-202ENST00000430889 SLC9A1P19634 815 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 JAM2P57087 298 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 SPP2Q13103 211 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 ZC2HC1CQ53FD0 456 aaPredicted RBP15.32■□□□□ 0.04
HOXC4-202ENST00000430889 SAMD1Q6SPF0 538 aaPredicted RBP15.32■□□□□ 0.04
HOXC4-202ENST00000430889 SAMD7Q7Z3H4 446 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 IRF2BP2Q7Z5L9 587 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 BANK1Q8NDB2 785 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 REPS2Q8NFH8 660 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 UBE2Q2Q8WVN8 375 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 FUT8Q9BYC5 575 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 DBR1Q9UK59 544 aaKnown RBP15.32■□□□□ 0.04
HOXC4-202ENST00000430889 PNMA2Q9UL42 364 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 SNX12Q9UMY4 172 aa15.32■□□□□ 0.04
HOXC4-202ENST00000430889 DICER1Q9UPY3 1922 aaKnown RBP15.31■□□□□ 0.04
HOXC4-202ENST00000430889 ATP8B3O60423 1300 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 PDE2AO00408 941 aaPredicted RBP15.31■□□□□ 0.04
HOXC4-202ENST00000430889 MAP2K7O14733 419 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 CLIC2O15247 247 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 MOCS3O95396 460 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 P4HBP07237 508 aaKnown RBP15.31■□□□□ 0.04
HOXC4-202ENST00000430889 FDX1P10109 184 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 ALAS1P13196 640 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 UCHL3P15374 230 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 PRKCIP41743 596 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 MTMR2Q13614 643 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 SLC18A3Q16572 532 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 EXOC3L4Q17RC7 722 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 BEND6Q5SZJ8 279 aaPredicted RBP15.31■□□□□ 0.04
HOXC4-202ENST00000430889 NBPF12Q5TAG4 269 aaPredicted RBP15.31■□□□□ 0.04
HOXC4-202ENST00000430889 MIER3Q7Z3K6 550 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 GPIHBP1Q8IV16 184 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 SLC9A9Q8IVB4 645 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 RNF10Q8N5U6 811 aaKnown RBP15.31■□□□□ 0.04
HOXC4-202ENST00000430889 RPGRIP1Q96KN7 1286 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 TAAR1Q96RJ0 339 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 ARFGAP3Q9NP61 516 aa15.31■□□□□ 0.04
HOXC4-202ENST00000430889 AJAP1Q9UKB5 411 aaPredicted RBP15.31■□□□□ 0.04
HOXC4-202ENST00000430889 PAPPA2Q9BXP8 1791 aa15.3■□□□□ 0.04
HOXC4-202ENST00000430889 HIP1RO75146 1068 aa15.3■□□□□ 0.04
HOXC4-202ENST00000430889 TUBBP07437 444 aa15.3■□□□□ 0.04
HOXC4-202ENST00000430889 MAPTP10636 758 aaKnown RBP15.3■□□□□ 0.04
HOXC4-202ENST00000430889 USP14P54578 494 aa15.3■□□□□ 0.04
HOXC4-202ENST00000430889 RPS6P62753 249 aaKnown RBP15.3■□□□□ 0.04
HOXC4-202ENST00000430889 GABPB1Q06547 395 aaPredicted RBP15.3■□□□□ 0.04
HOXC4-202ENST00000430889 CKAP4Q07065 602 aaKnown RBP15.3■□□□□ 0.04
HOXC4-202ENST00000430889 PGM5Q15124 567 aa15.3■□□□□ 0.04
HOXC4-202ENST00000430889 TDRD12Q587J7 1177 aaKnown RBP15.3■□□□□ 0.04
HOXC4-202ENST00000430889 WDR93Q6P2C0 686 aa15.3■□□□□ 0.04
HOXC4-202ENST00000430889 CREG2Q8IUH2 290 aa15.3■□□□□ 0.04
HOXC4-202ENST00000430889 FAM178BQ8IXR5 827 aa15.3■□□□□ 0.04
HOXC4-202ENST00000430889 TXLNBQ8N3L3 684 aa15.3■□□□□ 0.04
HOXC4-202ENST00000430889 RBM46Q8TBY0 533 aaKnown RBP15.3■□□□□ 0.04
HOXC4-202ENST00000430889 UPF1Q92900 1129 aaKnown RBP eCLIP15.3■□□□□ 0.04
HOXC4-202ENST00000430889 C12orf42Q96LP6 360 aa15.3■□□□□ 0.04
HOXC4-202ENST00000430889 RPAP3Q9H6T3 665 aaPredicted RBP15.3■□□□□ 0.04
HOXC4-202ENST00000430889 AGPAT3Q9NRZ7 376 aa15.3■□□□□ 0.04
HOXC4-202ENST00000430889 CNOT7Q9UIV1 285 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms