RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 TBC1D22BQ9NU19 505 aa18.46■□□□□ 0.55
PTPRA-206ENST00000430705 NOC2LQ9Y3T9 749 aaKnown RBP18.46■□□□□ 0.55
PTPRA-206ENST00000430705 MRPL42Q9Y6G3 142 aaKnown RBP18.46■□□□□ 0.55
PTPRA-206ENST00000430705 MYH9P35579 1960 aaKnown RBP18.46■□□□□ 0.55
PTPRA-206ENST00000430705 M0R2N6 131 aa18.45■□□□□ 0.54
PTPRA-206ENST00000430705 ZNF862O60290 1169 aa18.45■□□□□ 0.54
PTPRA-206ENST00000430705 KCNA5P22460 613 aa18.45■□□□□ 0.54
PTPRA-206ENST00000430705 BMPR1AP36894 532 aa18.45■□□□□ 0.54
PTPRA-206ENST00000430705 UGCGQ16739 394 aa18.45■□□□□ 0.54
PTPRA-206ENST00000430705 LEXMQ3ZCV2 418 aa18.45■□□□□ 0.54
PTPRA-206ENST00000430705 TIGD5Q53EQ6 642 aa18.45■□□□□ 0.54
PTPRA-206ENST00000430705 ZNF484Q5JVG2 852 aa18.45■□□□□ 0.54
PTPRA-206ENST00000430705 SMAP1Q8IYB5 467 aaPredicted RBP18.45■□□□□ 0.54
PTPRA-206ENST00000430705 NME8Q8N427 588 aa18.45■□□□□ 0.54
PTPRA-206ENST00000430705 LINC01465Q8N7H1 131 aa18.45■□□□□ 0.54
PTPRA-206ENST00000430705 BANK1Q8NDB2 785 aa18.45■□□□□ 0.54
PTPRA-206ENST00000430705 TNPO1Q92973 898 aaKnown RBP18.45■□□□□ 0.54
PTPRA-206ENST00000430705 PPP1R16BQ96T49 567 aa18.45■□□□□ 0.54
PTPRA-206ENST00000430705 FNDC1Q4ZHG4 1894 aaPredicted RBP18.45■□□□□ 0.54
PTPRA-206ENST00000430705 PLXNA4Q9HCM2 1894 aa18.45■□□□□ 0.54
PTPRA-206ENST00000430705 M0QZ92 97 aa18.44■□□□□ 0.54
PTPRA-206ENST00000430705 AKAP17AQ02040 695 aaKnown RBP18.44■□□□□ 0.54
PTPRA-206ENST00000430705 CAMK1Q14012 370 aa18.44■□□□□ 0.54
PTPRA-206ENST00000430705 BTG3Q14201 252 aaPredicted RBP18.44■□□□□ 0.54
PTPRA-206ENST00000430705 PTPROQ16827 1216 aa18.44■□□□□ 0.54
PTPRA-206ENST00000430705 NPAS4Q8IUM7 802 aa18.44■□□□□ 0.54
PTPRA-206ENST00000430705 BICD2Q8TD16 824 aa18.44■□□□□ 0.54
PTPRA-206ENST00000430705 NEK9Q8TD19 979 aa18.44■□□□□ 0.54
PTPRA-206ENST00000430705 BBXQ8WY36 941 aaPredicted RBP18.44■□□□□ 0.54
PTPRA-206ENST00000430705 SLC5A5Q92911 643 aa18.44■□□□□ 0.54
PTPRA-206ENST00000430705 FTHL17Q9BXU8 183 aa18.44■□□□□ 0.54
PTPRA-206ENST00000430705 TM6SF1Q9BZW5 370 aa18.44■□□□□ 0.54
PTPRA-206ENST00000430705 SH3GLB2Q9NR46 395 aa18.44■□□□□ 0.54
PTPRA-206ENST00000430705 GABBR1Q9UBS5 961 aa18.44■□□□□ 0.54
PTPRA-206ENST00000430705 DTNBO60941 627 aa18.43■□□□□ 0.54
PTPRA-206ENST00000430705 GPR32O75388 356 aa18.43■□□□□ 0.54
PTPRA-206ENST00000430705 IL9P15248 144 aa18.43■□□□□ 0.54
PTPRA-206ENST00000430705 FAM228AQ86W67 206 aa18.43■□□□□ 0.54
PTPRA-206ENST00000430705 CMTR2Q8IYT2 770 aaKnown RBP18.43■□□□□ 0.54
PTPRA-206ENST00000430705 ZNF274Q96GC6 653 aaPredicted RBP18.43■□□□□ 0.54
PTPRA-206ENST00000430705 UNC45AQ9H3U1 944 aa18.43■□□□□ 0.54
PTPRA-206ENST00000430705 NSUN3Q9H649 340 aaKnown RBP18.43■□□□□ 0.54
PTPRA-206ENST00000430705 RAPGEFL1Q9UHV5 662 aa18.43■□□□□ 0.54
PTPRA-206ENST00000430705 GINS2Q9Y248 185 aa18.43■□□□□ 0.54
PTPRA-206ENST00000430705 PCDHA10Q9Y5I2 948 aa18.43■□□□□ 0.54
PTPRA-206ENST00000430705 CYP46A1Q9Y6A2 500 aa18.43■□□□□ 0.54
PTPRA-206ENST00000430705 TDP2O95551 362 aa18.42■□□□□ 0.54
PTPRA-206ENST00000430705 VTNP04004 478 aa18.42■□□□□ 0.54
PTPRA-206ENST00000430705 RB1P06400 928 aa18.42■□□□□ 0.54
PTPRA-206ENST00000430705 PSAPP07602 524 aa18.42■□□□□ 0.54
PTPRA-206ENST00000430705 DNAJB1P25685 340 aa18.42■□□□□ 0.54
PTPRA-206ENST00000430705 CLCN3P51790 818 aa18.42■□□□□ 0.54
PTPRA-206ENST00000430705 STK3Q13188 491 aa18.42■□□□□ 0.54
PTPRA-206ENST00000430705 KIZQ2M2Z5 673 aa18.42■□□□□ 0.54
PTPRA-206ENST00000430705 PAN2Q504Q3 1202 aaKnown RBP18.42■□□□□ 0.54
PTPRA-206ENST00000430705 B3GNT9Q6UX72 402 aa18.42■□□□□ 0.54
PTPRA-206ENST00000430705 TRMT1LQ7Z2T5 733 aaKnown RBP18.42■□□□□ 0.54
PTPRA-206ENST00000430705 DAGLBQ8NCG7 672 aa18.42■□□□□ 0.54
PTPRA-206ENST00000430705 TBCKQ8TEA7 893 aa18.42■□□□□ 0.54
PTPRA-206ENST00000430705 OSMRQ99650 979 aa18.42■□□□□ 0.54
PTPRA-206ENST00000430705 C11orf84Q9BUA3 381 aaPredicted RBP18.42■□□□□ 0.54
PTPRA-206ENST00000430705 PCDHA4Q9UN74 947 aa18.42■□□□□ 0.54
PTPRA-206ENST00000430705 MYO7AQ13402 2215 aa18.42■□□□□ 0.54
PTPRA-206ENST00000430705 WDR64B1ANS9 1081 aa18.41■□□□□ 0.54
PTPRA-206ENST00000430705 H3BQ06 376 aaPredicted RBP18.41■□□□□ 0.54
PTPRA-206ENST00000430705 RPS6KA5O75582 802 aa18.41■□□□□ 0.54
PTPRA-206ENST00000430705 MMP1P03956 469 aa18.41■□□□□ 0.54
PTPRA-206ENST00000430705 LTBRP36941 435 aa18.41■□□□□ 0.54
PTPRA-206ENST00000430705 USP11P51784 963 aa18.41■□□□□ 0.54
PTPRA-206ENST00000430705 NLRP5P59047 1200 aa18.41■□□□□ 0.54
PTPRA-206ENST00000430705 PRKCEQ02156 737 aa18.41■□□□□ 0.54
PTPRA-206ENST00000430705 SSRP1Q08945 709 aaKnown RBP18.41■□□□□ 0.54
PTPRA-206ENST00000430705 CKAP2LQ8IYA6 745 aa18.41■□□□□ 0.54
PTPRA-206ENST00000430705 PABPC5Q96DU9 382 aaKnown RBP18.41■□□□□ 0.54
PTPRA-206ENST00000430705 MBOAT7Q96N66 472 aa18.41■□□□□ 0.54
PTPRA-206ENST00000430705 ALG13Q9NP73 1137 aaKnown RBP18.41■□□□□ 0.54
PTPRA-206ENST00000430705 HCSTQ9UBK5 93 aa18.41■□□□□ 0.54
PTPRA-206ENST00000430705 ST3GAL5Q9UNP4 418 aa18.41■□□□□ 0.54
PTPRA-206ENST00000430705 RWDD3Q9Y3V2 267 aa18.41■□□□□ 0.54
PTPRA-206ENST00000430705 C9IYK1 514 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 CHMP2AO43633 222 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 PSMD10O75832 226 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 CSPG5O95196 566 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 DEXIO95424 95 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 OATP04181 439 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 ITGB1P05556 798 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 GTF2F1P35269 517 aaKnown RBP eCLIP18.4■□□□□ 0.54
PTPRA-206ENST00000430705 SARSP49591 514 aaKnown RBP18.4■□□□□ 0.54
PTPRA-206ENST00000430705 SCRN1Q12765 414 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 HYAL1Q12794 435 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 NFX1Q12986 1120 aaKnown RBP18.4■□□□□ 0.54
PTPRA-206ENST00000430705 DSC3Q14574 896 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 Q4G0T1 1027 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 BLIDQ8IZY5 108 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 LRRC71Q8N4P6 559 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 RIT2Q99578 217 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 LMAN2LQ9H0V9 348 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 EPHX3Q9H6B9 360 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 DISC1Q9NRI5 854 aa18.4■□□□□ 0.54
PTPRA-206ENST00000430705 RGS18Q9NS28 235 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms