RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 TMEM47Q9BQJ4 181 aa11.56□□□□□ -0.56
ATG4B-212ENST00000430617 RTP3Q9BQQ7 232 aa11.56□□□□□ -0.56
ATG4B-212ENST00000430617 MTA3Q9BTC8 594 aa11.56□□□□□ -0.56
ATG4B-212ENST00000430617 LRRC2Q9BYS8 371 aa11.56□□□□□ -0.56
ATG4B-212ENST00000430617 PXMP2Q9NR77 195 aa11.56□□□□□ -0.56
ATG4B-212ENST00000430617 BAZ2BQ9UIF8 2168 aaKnown RBP11.56□□□□□ -0.56
ATG4B-212ENST00000430617 TPCN1Q9ULQ1 816 aa11.56□□□□□ -0.56
ATG4B-212ENST00000430617 TELO2Q9Y4R8 837 aa11.56□□□□□ -0.56
ATG4B-212ENST00000430617 MYH15Q9Y2K3 1946 aa11.56□□□□□ -0.56
ATG4B-212ENST00000430617 SLC3A2P08195 630 aaKnown RBP11.55□□□□□ -0.56
ATG4B-212ENST00000430617 HOXB8P17481 243 aaPredicted RBP11.55□□□□□ -0.56
ATG4B-212ENST00000430617 ARHGAP4P98171 946 aa11.55□□□□□ -0.56
ATG4B-212ENST00000430617 UBE3AQ05086 875 aa11.55□□□□□ -0.56
ATG4B-212ENST00000430617 PPP4R3BQ5MIZ7 849 aa11.55□□□□□ -0.56
ATG4B-212ENST00000430617 KIAA0319Q5VV43 1072 aa11.55□□□□□ -0.56
ATG4B-212ENST00000430617 KANK3Q6NY19 840 aa11.55□□□□□ -0.56
ATG4B-212ENST00000430617 TRIM50Q86XT4 487 aa11.55□□□□□ -0.56
ATG4B-212ENST00000430617 ZDHHC14Q8IZN3 488 aa11.55□□□□□ -0.56
ATG4B-212ENST00000430617 SIX5Q8N196 739 aa11.55□□□□□ -0.56
ATG4B-212ENST00000430617 ESR2Q92731 530 aa11.55□□□□□ -0.56
ATG4B-212ENST00000430617 BRF1Q92994 677 aa11.55□□□□□ -0.56
ATG4B-212ENST00000430617 TMEM87BQ96K49 555 aa11.55□□□□□ -0.56
ATG4B-212ENST00000430617 ADAM7Q9H2U9 754 aa11.55□□□□□ -0.56
ATG4B-212ENST00000430617 TMEM260Q9NX78 707 aa11.55□□□□□ -0.56
ATG4B-212ENST00000430617 LIMCH1Q9UPQ0 1083 aa11.55□□□□□ -0.56
ATG4B-212ENST00000430617 ZFYVE26Q68DK2 2539 aa11.55□□□□□ -0.56
ATG4B-212ENST00000430617 FSD2A1L4K1 749 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 RANBP6O60518 1105 aaKnown RBP11.54□□□□□ -0.56
ATG4B-212ENST00000430617 ADRB1P08588 477 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 SP9P0CG40 484 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 SRGAP2BP0DMP2 458 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 MYCLP12524 364 aaPredicted RBP11.54□□□□□ -0.56
ATG4B-212ENST00000430617 CD52P31358 61 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 ZNF543Q08ER8 600 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 SEC23AQ15436 765 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 ME3Q16798 604 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 RRP12Q5JTH9 1297 aaKnown RBP11.54□□□□□ -0.56
ATG4B-212ENST00000430617 SGMS1Q86VZ5 419 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 NPAS4Q8IUM7 802 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 TDRD5Q8NAT2 981 aaKnown RBP11.54□□□□□ -0.56
ATG4B-212ENST00000430617 IGDCC4Q8TDY8 1250 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 CHAMP1Q96JM3 812 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 LY9Q9HBG7 655 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 ZSWIM5Q9P217 1185 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 PNMA2Q9UL42 364 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 COL4A3Q01955 1670 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 WDFY3Q8IZQ1 3526 aa11.54□□□□□ -0.56
ATG4B-212ENST00000430617 DOCK6Q96HP0 2047 aa11.53□□□□□ -0.56
ATG4B-212ENST00000430617 GOLGA8HP0CJ92 632 aa11.53□□□□□ -0.56
ATG4B-212ENST00000430617 TOP1P11387 765 aaKnown RBP11.53□□□□□ -0.56
ATG4B-212ENST00000430617 GNAT1P11488 350 aa11.53□□□□□ -0.56
ATG4B-212ENST00000430617 DDIT3P35638 169 aa11.53□□□□□ -0.56
ATG4B-212ENST00000430617 TSHZ1Q6ZSZ6 1077 aa11.53□□□□□ -0.56
ATG4B-212ENST00000430617 C12orf76Q8N812 135 aaPredicted RBP11.53□□□□□ -0.56
ATG4B-212ENST00000430617 IL31RAQ8NI17 732 aa11.53□□□□□ -0.56
ATG4B-212ENST00000430617 ZSCAN31Q96LW9 406 aaPredicted RBP11.53□□□□□ -0.56
ATG4B-212ENST00000430617 NECTIN4Q96NY8 510 aa11.53□□□□□ -0.56
ATG4B-212ENST00000430617 LARP6Q9BRS8 491 aaKnown RBP11.53□□□□□ -0.56
ATG4B-212ENST00000430617 UBA5Q9GZZ9 404 aa11.53□□□□□ -0.56
ATG4B-212ENST00000430617 SENP2Q9HC62 589 aa11.53□□□□□ -0.56
ATG4B-212ENST00000430617 SH2B1Q9NRF2 756 aaPredicted RBP11.53□□□□□ -0.56
ATG4B-212ENST00000430617 AAASQ9NRG9 546 aa11.53□□□□□ -0.56
ATG4B-212ENST00000430617 TOMM22Q9NS69 142 aa11.53□□□□□ -0.56
ATG4B-212ENST00000430617 PCDHB12Q9Y5F1 795 aa11.53□□□□□ -0.56
ATG4B-212ENST00000430617 HCFC2Q9Y5Z7 792 aa11.53□□□□□ -0.56
ATG4B-212ENST00000430617 CDY2AQ9Y6F7 541 aa11.53□□□□□ -0.56
ATG4B-212ENST00000430617 CNOT1A5YKK6 2376 aaKnown RBP11.53□□□□□ -0.56
ATG4B-212ENST00000430617 KRBA1A5PL33 1030 aa11.52□□□□□ -0.57
ATG4B-212ENST00000430617 OPLAHO14841 1288 aa11.52□□□□□ -0.57
ATG4B-212ENST00000430617 NARSO43776 548 aaKnown RBP11.52□□□□□ -0.57
ATG4B-212ENST00000430617 IBSPP21815 317 aaPredicted RBP11.52□□□□□ -0.57
ATG4B-212ENST00000430617 LIFRP42702 1097 aa11.52□□□□□ -0.57
ATG4B-212ENST00000430617 ITIH3Q06033 890 aa11.52□□□□□ -0.57
ATG4B-212ENST00000430617 ACAP1Q15027 740 aa11.52□□□□□ -0.57
ATG4B-212ENST00000430617 CDC37Q16543 378 aaPredicted RBP11.52□□□□□ -0.57
ATG4B-212ENST00000430617 SPOUT1Q5T280 376 aaKnown RBP11.52□□□□□ -0.57
ATG4B-212ENST00000430617 PDE12Q6L8Q7 609 aaKnown RBP11.52□□□□□ -0.57
ATG4B-212ENST00000430617 CES5AQ6NT32 575 aa11.52□□□□□ -0.57
ATG4B-212ENST00000430617 THNSL1Q8IYQ7 743 aa11.52□□□□□ -0.57
ATG4B-212ENST00000430617 ENAHQ8N8S7 591 aaPredicted RBP11.52□□□□□ -0.57
ATG4B-212ENST00000430617 COLGALT1Q8NBJ5 622 aa11.52□□□□□ -0.57
ATG4B-212ENST00000430617 DNAJB3Q8WWF6 145 aa11.52□□□□□ -0.57
ATG4B-212ENST00000430617 GTF3C6Q969F1 213 aa11.52□□□□□ -0.57
ATG4B-212ENST00000430617 TCF25Q9BQ70 676 aa11.52□□□□□ -0.57
ATG4B-212ENST00000430617 PDCD2LQ9BRP1 358 aa11.52□□□□□ -0.57
ATG4B-212ENST00000430617 MLXIPQ9HAP2 919 aa11.52□□□□□ -0.57
ATG4B-212ENST00000430617 BRPF3Q9ULD4 1205 aa11.52□□□□□ -0.57
ATG4B-212ENST00000430617 ABCB11O95342 1321 aa11.52□□□□□ -0.57
ATG4B-212ENST00000430617 MTCL1Q9Y4B5 1905 aaKnown RBP11.51□□□□□ -0.57
ATG4B-212ENST00000430617 PFKFB2O60825 505 aa11.51□□□□□ -0.57
ATG4B-212ENST00000430617 EOMESO95936 686 aa11.51□□□□□ -0.57
ATG4B-212ENST00000430617 STAG3L1P0CL83 205 aa11.51□□□□□ -0.57
ATG4B-212ENST00000430617 SNHG28P0DPA3 235 aa11.51□□□□□ -0.57
ATG4B-212ENST00000430617 SCG2P13521 617 aa11.51□□□□□ -0.57
ATG4B-212ENST00000430617 MTHFRP42898 656 aa11.51□□□□□ -0.57
ATG4B-212ENST00000430617 TDGQ13569 410 aa11.51□□□□□ -0.57
ATG4B-212ENST00000430617 TPRNQ4KMQ1 711 aa11.51□□□□□ -0.57
ATG4B-212ENST00000430617 RARS2Q5T160 578 aaKnown RBP11.51□□□□□ -0.57
ATG4B-212ENST00000430617 APOA5Q6Q788 366 aa11.51□□□□□ -0.57
ATG4B-212ENST00000430617 CASP10Q92851 521 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms