RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 SLC37A4O43826 429 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 CTDNEP1O95476 244 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 VTNP04004 478 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 DNAJB1P25685 340 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 KRT76Q01546 638 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 GPM6BQ13491 265 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 CAMK1Q14012 370 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 KIZQ2M2Z5 673 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 PAN2Q504Q3 1202 aaKnown RBP13.36□□□□□ -0.27
HDAC4-202ENST00000430200 TCEAL5Q5H9L2 206 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 MIS18BP1Q6P0N0 1132 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 B3GNT9Q6UX72 402 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 RSPH3Q86UC2 560 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 FAM228AQ86W67 206 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 CCDC148Q8NFR7 591 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 TBCKQ8TEA7 893 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 CCDC12Q8WUD4 166 aaPredicted RBP13.36□□□□□ -0.27
HDAC4-202ENST00000430200 SLC5A5Q92911 643 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 CLP1Q92989 425 aaKnown RBP13.36□□□□□ -0.27
HDAC4-202ENST00000430200 HLA-CQ95604 372 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 IL17RAQ96F46 866 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 ZNF668Q96K58 619 aaPredicted RBP13.36□□□□□ -0.27
HDAC4-202ENST00000430200 OSMRQ99650 979 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 TSPYL2Q9H2G4 693 aaPredicted RBP13.36□□□□□ -0.27
HDAC4-202ENST00000430200 LMCD1Q9NZU5 365 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 GABBR1Q9UBS5 961 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 TPCN1Q9ULQ1 816 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 KCNJ14Q9UNX9 436 aa13.36□□□□□ -0.27
HDAC4-202ENST00000430200 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-202ENST00000430200 C5orf67F2Z3F1 127 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 EPB41L2O43491 1005 aaKnown RBP13.35□□□□□ -0.27
HDAC4-202ENST00000430200 HBP1O60381 514 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 STBD1O95210 358 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 GNA11P29992 359 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 GTF2F1P35269 517 aaKnown RBP eCLIP13.35□□□□□ -0.271e-20■■■■□ 21.3
HDAC4-202ENST00000430200 SLC26A2P50443 739 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 PRKCEQ02156 737 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 ST3GAL1Q11201 340 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 PAK2Q13177 524 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 DRP2Q13474 957 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 COL19A1Q14993 1142 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 EARS2Q5JPH6 523 aaKnown RBP13.35□□□□□ -0.27
HDAC4-202ENST00000430200 FAM160B1Q5W0V3 765 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 LRRC71Q8N4P6 559 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 FIBCD1Q8N539 461 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 DAGLBQ8NCG7 672 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 ETNPPLQ8TBG4 499 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 ZNF274Q96GC6 653 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-202ENST00000430200 PCDHA4Q9UN74 947 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 COG5Q9UP83 839 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 GINS2Q9Y248 185 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 PCDHGC5Q9Y5F6 944 aa13.35□□□□□ -0.27
HDAC4-202ENST00000430200 H3BQ06 376 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-202ENST00000430200 GPR32O75388 356 aa13.34□□□□□ -0.27
HDAC4-202ENST00000430200 PSMD10O75832 226 aa13.34□□□□□ -0.27
HDAC4-202ENST00000430200 IL9P15248 144 aa13.34□□□□□ -0.27
HDAC4-202ENST00000430200 IBSPP21815 317 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-202ENST00000430200 KCNA5P22460 613 aa13.34□□□□□ -0.27
HDAC4-202ENST00000430200 NLRP5P59047 1200 aa13.34□□□□□ -0.27
HDAC4-202ENST00000430200 IER5Q5VY09 327 aa13.34□□□□□ -0.27
HDAC4-202ENST00000430200 SMAP1Q8IYB5 467 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-202ENST00000430200 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-202ENST00000430200 OXER1Q8TDS5 423 aa13.34□□□□□ -0.27
HDAC4-202ENST00000430200 MBOAT7Q96N66 472 aa13.34□□□□□ -0.27
HDAC4-202ENST00000430200 SAMD11Q96NU1 681 aa13.34□□□□□ -0.27
HDAC4-202ENST00000430200 CEP89Q96ST8 783 aa13.34□□□□□ -0.27
HDAC4-202ENST00000430200 SH2D3AQ9BRG2 576 aa13.34□□□□□ -0.27
HDAC4-202ENST00000430200 SH3GLB2Q9NR46 395 aa13.34□□□□□ -0.27
HDAC4-202ENST00000430200 TBC1D22BQ9NU19 505 aa13.34□□□□□ -0.27
HDAC4-202ENST00000430200 PDRG1Q9NUG6 133 aa13.34□□□□□ -0.27
HDAC4-202ENST00000430200 SQORQ9Y6N5 450 aa13.34□□□□□ -0.27
HDAC4-202ENST00000430200 WDR64B1ANS9 1081 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 WNT7AO00755 349 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 DEXIO95424 95 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 OATP04181 439 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 LTBRP36941 435 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 AKAP17AQ02040 695 aaKnown RBP13.33□□□□□ -0.28
HDAC4-202ENST00000430200 DLX2Q07687 328 aaPredicted RBP13.33□□□□□ -0.28
HDAC4-202ENST00000430200 SSRP1Q08945 709 aaKnown RBP13.33□□□□□ -0.28
HDAC4-202ENST00000430200 BTG3Q14201 252 aaPredicted RBP13.33□□□□□ -0.28
HDAC4-202ENST00000430200 DSC3Q14574 896 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 ZNF484Q5JVG2 852 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 LRCH2Q5VUJ6 765 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 NPAS4Q8IUM7 802 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 BLIDQ8IZY5 108 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 BANK1Q8NDB2 785 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 BICD2Q8TD16 824 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 BBXQ8WY36 941 aaPredicted RBP13.33□□□□□ -0.28
HDAC4-202ENST00000430200 PHF20Q9BVI0 1012 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 ALG13Q9NP73 1137 aaKnown RBP13.33□□□□□ -0.28
HDAC4-202ENST00000430200 DISC1Q9NRI5 854 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 RNF19AQ9NV58 838 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 PCDHA10Q9Y5I2 948 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 STK36Q9NRP7 1315 aa13.33□□□□□ -0.28
HDAC4-202ENST00000430200 C9IYK1 514 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 M0QZ92 97 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 LINC01565O15544 149 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 GAS7O60861 476 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 TBX10O75333 385 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 SEC24BO95487 1268 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms