RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 FOXD4L5Q5VV16 416 aaPredicted RBP16.72■□□□□ 0.27
GARNL3-204ENST00000429629 RSPH3Q86UC2 560 aa16.72■□□□□ 0.27
GARNL3-204ENST00000429629 FOXD4L4Q8WXT5 416 aaPredicted RBP16.72■□□□□ 0.27
GARNL3-204ENST00000429629 TRIM43Q96BQ3 446 aaPredicted RBP16.72■□□□□ 0.27
GARNL3-204ENST00000429629 NOC4LQ9BVI4 516 aaKnown RBP16.72■□□□□ 0.27
GARNL3-204ENST00000429629 FTOQ9C0B1 505 aaKnown RBP eCLIP16.72■□□□□ 0.27
GARNL3-204ENST00000429629 CYP26B1Q9NR63 512 aa16.72■□□□□ 0.27
GARNL3-204ENST00000429629 KDM3AQ9Y4C1 1321 aa16.71■□□□□ 0.27
GARNL3-204ENST00000429629 GAS2O43903 313 aaKnown RBP16.71■□□□□ 0.27
GARNL3-204ENST00000429629 MAFO75444 373 aaPredicted RBP16.71■□□□□ 0.27
GARNL3-204ENST00000429629 C22orf31O95567 290 aa16.71■□□□□ 0.27
GARNL3-204ENST00000429629 MARCKSP29966 332 aaPredicted RBP16.71■□□□□ 0.27
GARNL3-204ENST00000429629 ZNF200P98182 395 aaPredicted RBP16.71■□□□□ 0.27
GARNL3-204ENST00000429629 CYP4A11Q02928 519 aa16.71■□□□□ 0.27
GARNL3-204ENST00000429629 CEBPZQ03701 1054 aaKnown RBP16.71■□□□□ 0.27
GARNL3-204ENST00000429629 FAM26DQ5JW98 314 aa16.71■□□□□ 0.27
GARNL3-204ENST00000429629 C7orf61Q8IZ16 206 aa16.71■□□□□ 0.27
GARNL3-204ENST00000429629 RETREG2Q8NC44 543 aa16.71■□□□□ 0.27
GARNL3-204ENST00000429629 SNX29Q8TEQ0 813 aa16.71■□□□□ 0.27
GARNL3-204ENST00000429629 HIPK3Q9H422 1215 aa16.71■□□□□ 0.27
GARNL3-204ENST00000429629 DNM3Q9UQ16 869 aa16.71■□□□□ 0.27
GARNL3-204ENST00000429629 CUTAO60888 179 aa16.7■□□□□ 0.26
GARNL3-204ENST00000429629 TMOD1P28289 359 aa16.7■□□□□ 0.26
GARNL3-204ENST00000429629 RARRES1P49788 294 aa16.7■□□□□ 0.26
GARNL3-204ENST00000429629 TBC1D8BQ0IIM8 1120 aa16.7■□□□□ 0.26
GARNL3-204ENST00000429629 MFSD5Q6N075 450 aa16.7■□□□□ 0.26
GARNL3-204ENST00000429629 SH3RF1Q7Z6J0 888 aa16.7■□□□□ 0.26
GARNL3-204ENST00000429629 LINC01465Q8N7H1 131 aa16.7■□□□□ 0.26
GARNL3-204ENST00000429629 DHX38Q92620 1227 aaKnown RBP16.7■□□□□ 0.26
GARNL3-204ENST00000429629 CEP170P1Q96L14 293 aa16.7■□□□□ 0.26
GARNL3-204ENST00000429629 CSRNP2Q9H175 543 aa16.7■□□□□ 0.26
GARNL3-204ENST00000429629 DHX33Q9H6R0 707 aaKnown RBP16.7■□□□□ 0.26
GARNL3-204ENST00000429629 SEPT9Q9UHD8 586 aaPredicted RBP16.7■□□□□ 0.26
GARNL3-204ENST00000429629 SQORQ9Y6N5 450 aa16.7■□□□□ 0.26
GARNL3-204ENST00000429629 DGAT1O75907 488 aa16.69■□□□□ 0.26
GARNL3-204ENST00000429629 CYP2C9P11712 490 aa16.69■□□□□ 0.26
GARNL3-204ENST00000429629 CKBP12277 381 aa16.69■□□□□ 0.26
GARNL3-204ENST00000429629 RAG1P15918 1043 aa16.69■□□□□ 0.26
GARNL3-204ENST00000429629 SELPP16109 830 aa16.69■□□□□ 0.26
GARNL3-204ENST00000429629 RFC2P35250 354 aa16.69■□□□□ 0.26
GARNL3-204ENST00000429629 DNM2P50570 870 aa16.69■□□□□ 0.26
GARNL3-204ENST00000429629 IER5Q5VY09 327 aa16.69■□□□□ 0.26
GARNL3-204ENST00000429629 CABP7Q86V35 215 aa16.69■□□□□ 0.26
GARNL3-204ENST00000429629 KIAA0319LQ8IZA0 1049 aa16.69■□□□□ 0.26
GARNL3-204ENST00000429629 SLC7A3Q8WY07 619 aa16.69■□□□□ 0.26
GARNL3-204ENST00000429629 CALML4Q96GE6 196 aa16.69■□□□□ 0.26
GARNL3-204ENST00000429629 KIAA1024Q9UPX6 916 aa16.69■□□□□ 0.26
GARNL3-204ENST00000429629 PP2D1A8MPX8 630 aa16.68■□□□□ 0.26
GARNL3-204ENST00000429629 EYA4O95677 639 aa16.68■□□□□ 0.26
GARNL3-204ENST00000429629 CDC25AP30304 524 aa16.68■□□□□ 0.26
GARNL3-204ENST00000429629 TXLNAP40222 546 aa16.68■□□□□ 0.26
GARNL3-204ENST00000429629 IGBP1P78318 339 aa16.68■□□□□ 0.26
GARNL3-204ENST00000429629 TMEM119Q4V9L6 283 aa16.68■□□□□ 0.26
GARNL3-204ENST00000429629 XKR9Q5GH70 373 aa16.68■□□□□ 0.26
GARNL3-204ENST00000429629 AXDND1Q5T1B0 1012 aaPredicted RBP16.68■□□□□ 0.26
GARNL3-204ENST00000429629 ADALQ6DHV7 355 aa16.68■□□□□ 0.26
GARNL3-204ENST00000429629 TMEM199Q8N511 208 aa16.68■□□□□ 0.26
GARNL3-204ENST00000429629 PPP1R13LQ8WUF5 828 aa16.68■□□□□ 0.26
GARNL3-204ENST00000429629 LEO1Q8WVC0 666 aaPredicted RBP16.68■□□□□ 0.26
GARNL3-204ENST00000429629 CCDC39Q9UFE4 941 aa16.68■□□□□ 0.26
GARNL3-204ENST00000429629 ZBTB39O15060 712 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 ASAP2O43150 1006 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 PFKMP08237 780 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 IQCF3P0C7M6 154 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 NPEPPSP55786 919 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 GRIN1Q05586 938 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 ECM1Q16610 540 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 MTERF2Q49AM1 385 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 EFCAB12Q6NXP0 572 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 TRAF7Q6Q0C0 670 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 POTEGQ6S5H5 508 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 RUFY4Q6ZNE9 571 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 USP38Q8NB14 1042 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 PIGOQ8TEQ8 1089 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 TRAPPC12Q8WVT3 735 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 TCP11Q8WWU5 503 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 CDK5RAP3Q96JB5 506 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 SPATA32Q96LK8 384 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 PNMA5Q96PV4 448 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 LBHD1Q9BQE6 289 aaPredicted RBP16.67■□□□□ 0.26
GARNL3-204ENST00000429629 PRDM5Q9NQX1 630 aaPredicted RBP16.67■□□□□ 0.26
GARNL3-204ENST00000429629 DDX19AQ9NUU7 478 aaKnown RBP16.67■□□□□ 0.26
GARNL3-204ENST00000429629 KCND2Q9NZV8 630 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 PCDHA7Q9UN72 937 aa16.67■□□□□ 0.26
GARNL3-204ENST00000429629 RSPH10B2B2RC85 870 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 RSPH10BP0C881 870 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 CYP11B2P19099 503 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 ITGB8P26012 769 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 BMP8BP34820 402 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 THPOP40225 353 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 ME1P48163 572 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 POU5F1BQ06416 359 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 GRB10Q13322 594 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 FOXD4L6Q3SYB3 417 aaPredicted RBP16.66■□□□□ 0.26
GARNL3-204ENST00000429629 FOXD4L3Q6VB84 417 aaPredicted RBP16.66■□□□□ 0.26
GARNL3-204ENST00000429629 LRRC8DQ7L1W4 858 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 RPUSD2Q8IZ73 545 aaKnown RBP16.66■□□□□ 0.26
GARNL3-204ENST00000429629 SYT2Q8N9I0 419 aaPredicted RBP16.66■□□□□ 0.26
GARNL3-204ENST00000429629 MCPH1Q8NEM0 835 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 DNAJB3Q8WWF6 145 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms