RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 CPLX4Q7Z7G2 160 aa8.79□□□□□ -1
HPS4-205ENST00000429411 RNF217Q8TC41 542 aa8.79□□□□□ -1
HPS4-205ENST00000429411 DYDC1Q8WWB3 177 aa8.79□□□□□ -1
HPS4-205ENST00000429411 TEKT1Q969V4 418 aa8.79□□□□□ -1
HPS4-205ENST00000429411 VEZTQ9HBM0 779 aa8.79□□□□□ -1
HPS4-205ENST00000429411 AMACRQ9UHK6 382 aa8.79□□□□□ -1
HPS4-205ENST00000429411 PLAAQ9Y263 795 aa8.79□□□□□ -1
HPS4-205ENST00000429411 ATP8A1Q9Y2Q0 1164 aa8.79□□□□□ -1
HPS4-205ENST00000429411 ATP6V0A2Q9Y487 856 aa8.79□□□□□ -1
HPS4-205ENST00000429411 RASSF10A6NK89 507 aa8.79□□□□□ -1
HPS4-205ENST00000429411 GOLGA8KD6RF30 607 aa8.79□□□□□ -1
HPS4-205ENST00000429411 GCOM1H8Y6P7 765 aaPredicted RBP8.79□□□□□ -1
HPS4-205ENST00000429411 SORBS3O60504 671 aa8.79□□□□□ -1
HPS4-205ENST00000429411 BUB1BO60566 1050 aaPredicted RBP8.79□□□□□ -1
HPS4-205ENST00000429411 EXOC3O60645 756 aa8.79□□□□□ -1
HPS4-205ENST00000429411 MYZAPP0CAP1 466 aa8.79□□□□□ -1
HPS4-205ENST00000429411 MYBP10242 640 aa8.79□□□□□ -1
HPS4-205ENST00000429411 EEF2P13639 858 aaKnown RBP8.79□□□□□ -1
HPS4-205ENST00000429411 TNFAIP3P21580 790 aa8.79□□□□□ -1
HPS4-205ENST00000429411 RPL13P26373 211 aaKnown RBP8.79□□□□□ -1
HPS4-205ENST00000429411 PSMC6P62333 389 aa8.79□□□□□ -1
HPS4-205ENST00000429411 PTK2Q05397 1052 aa8.79□□□□□ -1
HPS4-205ENST00000429411 TTLL12Q14166 644 aaPredicted RBP8.79□□□□□ -1
HPS4-205ENST00000429411 MEA1Q16626 185 aa8.79□□□□□ -1
HPS4-205ENST00000429411 IFI16Q16666 785 aaKnown RBP8.79□□□□□ -1
HPS4-205ENST00000429411 PRAMEF18Q5VWM3 479 aa8.79□□□□□ -1
HPS4-205ENST00000429411 FBXW10Q5XX13 1052 aa8.79□□□□□ -1
HPS4-205ENST00000429411 PHLDB2Q86SQ0 1253 aa8.79□□□□□ -1
HPS4-205ENST00000429411 CEP120Q8N960 986 aa8.79□□□□□ -1
HPS4-205ENST00000429411 TBC1D22AQ8WUA7 517 aa8.79□□□□□ -1
HPS4-205ENST00000429411 TLR10Q9BXR5 811 aa8.79□□□□□ -1
HPS4-205ENST00000429411 CEP72Q9P209 647 aa8.79□□□□□ -1
HPS4-205ENST00000429411 POLLQ9UGP5 575 aa8.79□□□□□ -1
HPS4-205ENST00000429411 C4AP0C0L4 1744 aa8.78□□□□□ -1
HPS4-205ENST00000429411 C4BP0C0L5 1744 aa8.78□□□□□ -1
HPS4-205ENST00000429411 ZBTB5O15062 677 aa8.78□□□□□ -1
HPS4-205ENST00000429411 FGRP09769 529 aa8.78□□□□□ -1
HPS4-205ENST00000429411 TRIM49P0CI25 452 aa8.78□□□□□ -1
HPS4-205ENST00000429411 TRIM49CP0CI26 452 aa8.78□□□□□ -1
HPS4-205ENST00000429411 STAT1P42224 750 aa8.78□□□□□ -1
HPS4-205ENST00000429411 CEP57Q86XR8 500 aa8.78□□□□□ -1
HPS4-205ENST00000429411 CPXCR1Q8N123 301 aa8.78□□□□□ -1
HPS4-205ENST00000429411 CTTNBP2NLQ9P2B4 639 aa8.78□□□□□ -1
HPS4-205ENST00000429411 GABBR1Q9UBS5 961 aa8.78□□□□□ -1
HPS4-205ENST00000429411 KDM3AQ9Y4C1 1321 aa8.78□□□□□ -1
HPS4-205ENST00000429411 RAD51CO43502 376 aa8.78□□□□□ -1
HPS4-205ENST00000429411 CALUO43852 315 aaPredicted RBP8.78□□□□□ -1
HPS4-205ENST00000429411 AFPP02771 609 aaKnown RBP8.78□□□□□ -1
HPS4-205ENST00000429411 NR1D1P20393 614 aa8.78□□□□□ -1
HPS4-205ENST00000429411 LMNB1P20700 586 aa8.78□□□□□ -1
HPS4-205ENST00000429411 KCNA3P22001 575 aa8.78□□□□□ -1
HPS4-205ENST00000429411 NMT1P30419 496 aaKnown RBP8.78□□□□□ -1
HPS4-205ENST00000429411 SLCO1A2P46721 670 aa8.78□□□□□ -1
HPS4-205ENST00000429411 CASP4P49662 377 aa8.78□□□□□ -1
HPS4-205ENST00000429411 VPS41P49754 854 aa8.78□□□□□ -1
HPS4-205ENST00000429411 ADCY1Q08828 1119 aa8.78□□□□□ -1
HPS4-205ENST00000429411 ZNF543Q08ER8 600 aa8.78□□□□□ -1
HPS4-205ENST00000429411 MFSD4BQ5TF39 518 aa8.78□□□□□ -1
HPS4-205ENST00000429411 ZNF746Q6NUN9 644 aaPredicted RBP8.78□□□□□ -1
HPS4-205ENST00000429411 DLK2Q6UY11 383 aa8.78□□□□□ -1
HPS4-205ENST00000429411 GBP6Q6ZN66 633 aa8.78□□□□□ -1
HPS4-205ENST00000429411 FBXO11Q86XK2 927 aa8.78□□□□□ -1
HPS4-205ENST00000429411 TBC1D16Q8TBP0 767 aa8.78□□□□□ -1
HPS4-205ENST00000429411 CELF4Q9BZC1 486 aaKnown RBP8.78□□□□□ -1
HPS4-205ENST00000429411 BCAS3Q9H6U6 928 aa8.78□□□□□ -1
HPS4-205ENST00000429411 DDX4Q9NQI0 724 aaKnown RBP8.78□□□□□ -1
HPS4-205ENST00000429411 SIK3Q9Y2K2 1263 aa8.78□□□□□ -1
HPS4-205ENST00000429411 PTPN22Q9Y2R2 807 aa8.78□□□□□ -1
HPS4-205ENST00000429411 PCDHAC2Q9Y5I4 1007 aa8.78□□□□□ -1
HPS4-205ENST00000429411 CLRN2A0PK11 232 aa8.78□□□□□ -1
HPS4-205ENST00000429411 TARSL2A2RTX5 802 aaKnown RBP8.78□□□□□ -1
HPS4-205ENST00000429411 MED24O75448 989 aa8.78□□□□□ -1
HPS4-205ENST00000429411 CASP5P51878 434 aa8.78□□□□□ -1
HPS4-205ENST00000429411 ARHGAP4P98171 946 aa8.78□□□□□ -1
HPS4-205ENST00000429411 ZC2HC1CQ53FD0 456 aaPredicted RBP8.78□□□□□ -1
HPS4-205ENST00000429411 KLHDC7AQ5VTJ3 777 aa8.78□□□□□ -1
HPS4-205ENST00000429411 GLYCTKQ8IVS8 523 aa8.78□□□□□ -1
HPS4-205ENST00000429411 DAGLBQ8NCG7 672 aa8.78□□□□□ -1
HPS4-205ENST00000429411 CYP2W1Q8TAV3 490 aa8.78□□□□□ -1
HPS4-205ENST00000429411 MGARPQ8TDB4 240 aa8.78□□□□□ -1
HPS4-205ENST00000429411 CCDC114Q96M63 670 aa8.78□□□□□ -1
HPS4-205ENST00000429411 PSD3Q9NYI0 1048 aa8.78□□□□□ -1
HPS4-205ENST00000429411 RABGAP1Q9Y3P9 1069 aa8.78□□□□□ -1
HPS4-205ENST00000429411 NID2Q14112 1375 aa8.77□□□□□ -1
HPS4-205ENST00000429411 LAMB4A4D0S4 1761 aa8.77□□□□□ -1
HPS4-205ENST00000429411 GPR75-ASB3A0A0A6YYF3 556 aa8.77□□□□□ -1.01
HPS4-205ENST00000429411 TCP10L2B9ZVM9 353 aa8.77□□□□□ -1.01
HPS4-205ENST00000429411 NFKBIEO00221 500 aa8.77□□□□□ -1.01
HPS4-205ENST00000429411 DAPK3O43293 454 aa8.77□□□□□ -1.01
HPS4-205ENST00000429411 IFNAR2P48551 515 aa8.77□□□□□ -1.01
HPS4-205ENST00000429411 KCNA1Q09470 495 aa8.77□□□□□ -1.01
HPS4-205ENST00000429411 MAP1SQ66K74 1059 aaPredicted RBP8.77□□□□□ -1.01
HPS4-205ENST00000429411 EMBQ6PCB8 327 aa8.77□□□□□ -1.01
HPS4-205ENST00000429411 REEP2Q9BRK0 252 aa8.77□□□□□ -1.01
HPS4-205ENST00000429411 DNAJC17Q9NVM6 304 aaKnown RBP8.77□□□□□ -1.01
HPS4-205ENST00000429411 NOVA2Q9UNW9 492 aaKnown RBP8.77□□□□□ -1.01
HPS4-205ENST00000429411 MYH14Q7Z406 1995 aaKnown RBP8.77□□□□□ -1.01
HPS4-205ENST00000429411 FGGP02679 453 aa8.77□□□□□ -1.01
HPS4-205ENST00000429411 MAGEA9P43362 315 aa8.77□□□□□ -1.01
HPS4-205ENST00000429411 DHX9Q08211 1270 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms