RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 SLFN11Q7Z7L1 901 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 NLRP14Q86W24 1093 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 CCT8L2Q96SF2 557 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 TRIM6Q9C030 488 aaPredicted RBP9.64□□□□□ -0.87
CDH13-202ENST00000428848 ZC3H12CQ9C0D7 883 aaKnown RBP9.64□□□□□ -0.87
CDH13-202ENST00000428848 ACTR5Q9H9F9 607 aaPredicted RBP9.64□□□□□ -0.87
CDH13-202ENST00000428848 JMJD4Q9H9V9 463 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 BMP2KQ9NSY1 1161 aaPredicted RBP9.64□□□□□ -0.87
CDH13-202ENST00000428848 EMILIN3Q9NT22 766 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 SLC12A6Q9UHW9 1150 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 STXBP5LQ9Y2K9 1186 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 LRRC37AA6NMS7 1700 aa9.64□□□□□ -0.87
CDH13-202ENST00000428848 PITPNM2Q9BZ72 1349 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 FAM107AO95990 144 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 ANXA13P27216 316 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 HSD17B3P37058 310 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 TNNI2P48788 182 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 ADAM9Q13443 819 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 FRMD5Q7Z6J6 570 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 NELFCDQ8IXH7 590 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 RASGEF1CQ8N431 466 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 C3orf20Q8ND61 904 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 SEC14L1Q92503 715 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 GJA10Q969M2 543 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 SGSM3Q96HU1 749 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.63□□□□□ -0.87
CDH13-202ENST00000428848 KANSL2Q9H9L4 492 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 SWAP70Q9UH65 585 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 FBXL5Q9UKA1 691 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 PCDHA12Q9UN75 941 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 TRAF3IP3Q9Y228 551 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 BZW2Q9Y6E2 419 aaKnown RBP9.63□□□□□ -0.87
CDH13-202ENST00000428848 GOLGA6L7A0A1B0GV03 622 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 KCNK3O14649 394 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 EZRP15311 586 aaKnown RBP9.63□□□□□ -0.87
CDH13-202ENST00000428848 DNA2P51530 1060 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 SLC12A3P55017 1021 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 RNASE9P60153 205 aaKnown RBP9.63□□□□□ -0.87
CDH13-202ENST00000428848 ZNF543Q08ER8 600 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 SNCBQ16143 134 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 UBE2SQ16763 222 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 ARSHQ5FYA8 562 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 KLHL7Q8IXQ5 586 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 TPCN2Q8NHX9 752 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 TAF4BQ92750 862 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 LRRC45Q96CN5 670 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 MBOAT7Q96N66 472 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 NEUROG2Q9H2A3 272 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 ATP6V0A4Q9HBG4 840 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 POLD4Q9HCU8 107 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 KCNMB3Q9NPA1 279 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 TBC1D7Q9P0N9 293 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 NAGPAQ9UK23 515 aa9.63□□□□□ -0.87
CDH13-202ENST00000428848 A0A0A6YYK5 440 aaPredicted RBP9.62□□□□□ -0.87
CDH13-202ENST00000428848 NPHP3-ACAD11A0A0J9YXS1 232 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 CCDC188H7C350 402 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 CETN3O15182 167 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 RTN2O75298 545 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 NEBLO76041 1014 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 ACTN1P12814 892 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 UCHL3P15374 230 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 SLC9A1P19634 815 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 SEC24CP53992 1094 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 SLC8A3P57103 927 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 HDLBPQ00341 1268 aaKnown RBP9.62□□□□□ -0.87
CDH13-202ENST00000428848 ARID5AQ03989 594 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 ZNF844Q08AG5 666 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 IFI16Q16666 785 aaKnown RBP9.62□□□□□ -0.87
CDH13-202ENST00000428848 HERC4Q5GLZ8 1057 aaPredicted RBP9.62□□□□□ -0.87
CDH13-202ENST00000428848 EPM2AIP1Q7L775 607 aaPredicted RBP9.62□□□□□ -0.87
CDH13-202ENST00000428848 TAX1BP1Q86VP1 789 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 GPBP1Q86WP2 473 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 ADGRF4Q8IZF3 695 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 ARFGAP2Q8N6H7 521 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 METTL13Q8N6R0 699 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 OLIG1Q8TAK6 271 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 RBM46Q8TBY0 533 aaKnown RBP9.62□□□□□ -0.87
CDH13-202ENST00000428848 CUL5Q93034 780 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 GPR101Q96P66 508 aaPredicted RBP9.62□□□□□ -0.87
CDH13-202ENST00000428848 NAP1L4Q99733 375 aaKnown RBP9.62□□□□□ -0.87
CDH13-202ENST00000428848 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.62□□□□□ -0.87
CDH13-202ENST00000428848 PDGFDQ9GZP0 370 aaPredicted RBP9.62□□□□□ -0.87
CDH13-202ENST00000428848 POLLQ9UGP5 575 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 KIAA1024Q9UPX6 916 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 MYO3BQ8WXR4 1341 aa9.62□□□□□ -0.87
CDH13-202ENST00000428848 CYP3A7-CYP3A51PA0A087WV96 503 aa9.61□□□□□ -0.87
CDH13-202ENST00000428848 POTEB3A0JP26 581 aa9.61□□□□□ -0.87
CDH13-202ENST00000428848 KLHL33A6NCF5 533 aa9.61□□□□□ -0.87
CDH13-202ENST00000428848 POTECB2RU33 542 aa9.61□□□□□ -0.87
CDH13-202ENST00000428848 SART1O43290 800 aaKnown RBP9.61□□□□□ -0.87
CDH13-202ENST00000428848 PAEPP09466 180 aa9.61□□□□□ -0.87
CDH13-202ENST00000428848 AKR1B1P15121 316 aa9.61□□□□□ -0.87
CDH13-202ENST00000428848 CYP3A7P24462 503 aa9.61□□□□□ -0.87
CDH13-202ENST00000428848 PON1P27169 355 aa9.61□□□□□ -0.87
CDH13-202ENST00000428848 SLC8A1P32418 973 aa9.61□□□□□ -0.87
CDH13-202ENST00000428848 HOXD13P35453 343 aa9.61□□□□□ -0.87
CDH13-202ENST00000428848 NPEPPSP55786 919 aa9.61□□□□□ -0.87
CDH13-202ENST00000428848 JAM2P57087 298 aa9.61□□□□□ -0.87
CDH13-202ENST00000428848 POU5F1Q01860 360 aaKnown RBP9.61□□□□□ -0.87
CDH13-202ENST00000428848 IFFO1Q0D2I5 559 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms