RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 UNC45AQ9H3U1 944 aa17.43■□□□□ 0.38
TSPO-204ENST00000428336 CDHR5Q9HBB8 845 aa17.43■□□□□ 0.38
TSPO-204ENST00000428336 GJB4Q9NTQ9 266 aa17.43■□□□□ 0.38
TSPO-204ENST00000428336 PADI3Q9ULW8 664 aa17.43■□□□□ 0.38
TSPO-204ENST00000428336 SAMM50Q9Y512 469 aa17.43■□□□□ 0.38
TSPO-204ENST00000428336 MRPS5P82675 430 aaKnown RBP17.42■□□□□ 0.38
TSPO-204ENST00000428336 NONOQ15233 471 aaKnown RBP eCLIP17.42■□□□□ 0.38
TSPO-204ENST00000428336 UGCGQ16739 394 aa17.42■□□□□ 0.38
TSPO-204ENST00000428336 ME3Q16798 604 aa17.42■□□□□ 0.38
TSPO-204ENST00000428336 INF2Q27J81 1249 aa17.42■□□□□ 0.38
TSPO-204ENST00000428336 EPC2Q52LR7 807 aa17.42■□□□□ 0.38
TSPO-204ENST00000428336 B3GNT9Q6UX72 402 aa17.42■□□□□ 0.38
TSPO-204ENST00000428336 KRT25Q7Z3Z0 450 aa17.42■□□□□ 0.38
TSPO-204ENST00000428336 CRIPAKQ8N1N5 446 aa17.42■□□□□ 0.38
TSPO-204ENST00000428336 FBXO22Q8NEZ5 403 aa17.42■□□□□ 0.38
TSPO-204ENST00000428336 SYMPKQ92797 1274 aaKnown RBP17.42■□□□□ 0.38
TSPO-204ENST00000428336 TSPYL2Q9H2G4 693 aaPredicted RBP17.42■□□□□ 0.38
TSPO-204ENST00000428336 TMX1Q9H3N1 280 aa17.42■□□□□ 0.38
TSPO-204ENST00000428336 RC3H2Q9HBD1 1191 aaKnown RBP17.42■□□□□ 0.38
TSPO-204ENST00000428336 CHMP2AO43633 222 aa17.41■□□□□ 0.38
TSPO-204ENST00000428336 LARGE1O95461 756 aa17.41■□□□□ 0.38
TSPO-204ENST00000428336 LINC00271P0C7V0 271 aa17.41■□□□□ 0.38
TSPO-204ENST00000428336 FDPSP14324 419 aaKnown RBP17.41■□□□□ 0.38
TSPO-204ENST00000428336 SFNP31947 248 aa17.41■□□□□ 0.38
TSPO-204ENST00000428336 SKIV2LQ15477 1246 aaKnown RBP17.41■□□□□ 0.38
TSPO-204ENST00000428336 TMEM266Q2M3C6 531 aa17.41■□□□□ 0.38
TSPO-204ENST00000428336 NECAB1Q8N987 351 aa17.41■□□□□ 0.38
TSPO-204ENST00000428336 ETNPPLQ8TBG4 499 aa17.41■□□□□ 0.38
TSPO-204ENST00000428336 TMEM40Q8WWA1 233 aa17.41■□□□□ 0.38
TSPO-204ENST00000428336 ZNF689Q96CS4 500 aaPredicted RBP17.41■□□□□ 0.38
TSPO-204ENST00000428336 FAM167AQ96KS9 214 aa17.41■□□□□ 0.38
TSPO-204ENST00000428336 SAMD11Q96NU1 681 aa17.41■□□□□ 0.38
TSPO-204ENST00000428336 FTHL17Q9BXU8 183 aa17.41■□□□□ 0.38
TSPO-204ENST00000428336 ORC3Q9UBD5 711 aaPredicted RBP17.41■□□□□ 0.38
TSPO-204ENST00000428336 CEP131Q9UPN4 1083 aa17.41■□□□□ 0.38
TSPO-204ENST00000428336 OATP04181 439 aa17.4■□□□□ 0.38
TSPO-204ENST00000428336 JAK3P52333 1124 aa17.4■□□□□ 0.38
TSPO-204ENST00000428336 PRKCEQ02156 737 aa17.4■□□□□ 0.38
TSPO-204ENST00000428336 TFF2Q03403 129 aa17.4■□□□□ 0.38
TSPO-204ENST00000428336 PAK2Q13177 524 aa17.4■□□□□ 0.38
TSPO-204ENST00000428336 TMEM192Q8IY95 271 aa17.4■□□□□ 0.38
TSPO-204ENST00000428336 LINC01465Q8N7H1 131 aa17.4■□□□□ 0.38
TSPO-204ENST00000428336 RDM1Q8NG50 284 aa17.4■□□□□ 0.38
TSPO-204ENST00000428336 OXER1Q8TDS5 423 aa17.4■□□□□ 0.38
TSPO-204ENST00000428336 ERVK-5Q9HDB9 667 aa17.4■□□□□ 0.38
TSPO-204ENST00000428336 NRBP2Q9NSY0 501 aa17.4■□□□□ 0.38
TSPO-204ENST00000428336 GINS2Q9Y248 185 aa17.4■□□□□ 0.38
TSPO-204ENST00000428336 NOC2LQ9Y3T9 749 aaKnown RBP17.4■□□□□ 0.38
TSPO-204ENST00000428336 SIP14410 1827 aa17.4■□□□□ 0.38
TSPO-204ENST00000428336 COL4A6Q14031 1691 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 CCDC194A0A1B0GVG4 234 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 H3BNC9 293 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 MAGEB2O15479 319 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 SLC37A4O43826 429 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 GPR32O75388 356 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 DGKIO75912 1065 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 STBD1O95210 358 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 VTNP04004 478 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 XBP1P17861 261 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 NEK4P51957 841 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 NFX1Q12986 1120 aaKnown RBP17.39■□□□□ 0.37
TSPO-204ENST00000428336 LETM2Q2VYF4 491 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 MIER3Q7Z3K6 550 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 METTL13Q8N6R0 699 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 GTF3C6Q969F1 213 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 PPP1R16BQ96T49 567 aa17.39■□□□□ 0.37
TSPO-204ENST00000428336 DDX25Q9UHL0 483 aaKnown RBP17.39■□□□□ 0.37
TSPO-204ENST00000428336 TRANK1O15050 2925 aa17.38■□□□□ 0.37
TSPO-204ENST00000428336 RPS6KA5O75582 802 aa17.38■□□□□ 0.37
TSPO-204ENST00000428336 CLCN3P51790 818 aa17.38■□□□□ 0.37
TSPO-204ENST00000428336 CRYBB1P53674 252 aaPredicted RBP17.38■□□□□ 0.37
TSPO-204ENST00000428336 TARBP2Q15633 366 aaKnown RBP17.38■□□□□ 0.37
TSPO-204ENST00000428336 KIZQ2M2Z5 673 aa17.38■□□□□ 0.37
TSPO-204ENST00000428336 EARS2Q5JPH6 523 aaKnown RBP17.38■□□□□ 0.37
TSPO-204ENST00000428336 EFCAB12Q6NXP0 572 aa17.38■□□□□ 0.37
TSPO-204ENST00000428336 PIK3AP1Q6ZUJ8 805 aa17.38■□□□□ 0.37
TSPO-204ENST00000428336 NEK8Q86SG6 692 aa17.38■□□□□ 0.37
TSPO-204ENST00000428336 NPAS4Q8IUM7 802 aa17.38■□□□□ 0.37
TSPO-204ENST00000428336 FIBCD1Q8N539 461 aa17.38■□□□□ 0.37
TSPO-204ENST00000428336 KCNMB3Q9NPA1 279 aa17.38■□□□□ 0.37
TSPO-204ENST00000428336 COG5Q9UP83 839 aa17.38■□□□□ 0.37
TSPO-204ENST00000428336 ADGRA3Q8IWK6 1321 aa17.38■□□□□ 0.37
TSPO-204ENST00000428336 C5orf67F2Z3F1 127 aa17.37■□□□□ 0.37
TSPO-204ENST00000428336 MGEA5O60502 916 aa17.37■□□□□ 0.37
TSPO-204ENST00000428336 BMP1P13497 986 aa17.37■□□□□ 0.37
TSPO-204ENST00000428336 BMPR1AP36894 532 aa17.37■□□□□ 0.37
TSPO-204ENST00000428336 ST3GAL1Q11201 340 aa17.37■□□□□ 0.37
TSPO-204ENST00000428336 GPM6BQ13491 265 aa17.37■□□□□ 0.37
TSPO-204ENST00000428336 PPP4R3AQ6IN85 833 aa17.37■□□□□ 0.37
TSPO-204ENST00000428336 FAM43BQ6ZT52 329 aaPredicted RBP17.37■□□□□ 0.37
TSPO-204ENST00000428336 LRRC71Q8N4P6 559 aa17.37■□□□□ 0.37
TSPO-204ENST00000428336 NSUN7Q8NE18 718 aaKnown RBP17.37■□□□□ 0.37
TSPO-204ENST00000428336 WASF1Q92558 559 aa17.37■□□□□ 0.37
TSPO-204ENST00000428336 CLP1Q92989 425 aaKnown RBP17.37■□□□□ 0.37
TSPO-204ENST00000428336 HLA-CQ95604 372 aa17.37■□□□□ 0.37
TSPO-204ENST00000428336 MRPL38Q96DV4 380 aaKnown RBP17.37■□□□□ 0.37
TSPO-204ENST00000428336 OSMRQ99650 979 aa17.37■□□□□ 0.37
TSPO-204ENST00000428336 NIFKQ9BYG3 293 aaKnown RBP17.37■□□□□ 0.37
TSPO-204ENST00000428336 ADAMTS10Q9H324 1103 aa17.37■□□□□ 0.37
TSPO-204ENST00000428336 ST3GAL5Q9UNP4 418 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms