RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 FGFR1OPO95684 399 aaKnown RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 SERPING1P05155 500 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 AIMP1Q12904 312 aaKnown RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 DAB2IPQ5VWQ8 1189 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 PNMA8AQ86V59 439 aaPredicted RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 METTL13Q8N6R0 699 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 LRRC15Q8TF66 581 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 NLRC4Q9NPP4 1024 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 MAGEC2Q9UBF1 373 aaPredicted RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 NPEPPSP55786 919 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 CNGA2Q16280 664 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 FAM83BQ5T0W9 1011 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 INPP5DQ92835 1189 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 EHD2Q9NZN4 543 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 EID1Q9Y6B2 187 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 TNS3Q68CZ2 1445 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 PVALEFA0A1B0GWK0 134 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 AGTP01019 485 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 TCIRG1Q13488 830 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 RRAGBQ5VZM2 374 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 DTHD1Q6ZMT9 781 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 FAM43BQ6ZT52 329 aaPredicted RBP5.59□□□□□ -1.51
RIF1-203ENST00000428287 KLHL23Q8NBE8 558 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 TRIM47Q96LD4 638 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 PCYOX1Q9UHG3 505 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 MAPK8IP1Q9UQF2 711 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 ACTL7BQ9Y614 415 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 ZNF532Q9HCE3 1301 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 CACNA1DQ01668 2161 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 TJP3O95049 919 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 VEGFAP15692 232 aaPredicted RBP5.59□□□□□ -1.51
RIF1-203ENST00000428287 KRT2P35908 639 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 GNAQP50148 359 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 MFSD6Q6ZSS7 791 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 TMTC3Q6ZXV5 915 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 IRGQQ8WZA9 623 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 DCAF5Q96JK2 942 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 INTS9Q9NV88 658 aaKnown RBP5.59□□□□□ -1.51
RIF1-203ENST00000428287 STXBP5LQ9Y2K9 1186 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 ZNF804BA4D1E1 1349 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 DAPK3O43293 454 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 MMEP08473 750 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 PABPC4Q13310 644 aaKnown RBP eCLIP5.59□□□□□ -1.51
RIF1-203ENST00000428287 MOGSQ13724 837 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 CYP1B1Q16678 543 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 RNF43Q68DV7 783 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 GALNT17Q6IS24 598 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.59□□□□□ -1.51
RIF1-203ENST00000428287 NT5DC3Q86UY8 548 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 FAM81AQ8TBF8 368 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 EEF2KMTQ96G04 330 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 PSMB7Q99436 277 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 KRT12Q99456 494 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 TSC22D3Q99576 134 aa5.59□□□□□ -1.51
RIF1-203ENST00000428287 ROPN1BQ9BZX4 212 aaPredicted RBP5.59□□□□□ -1.51
RIF1-203ENST00000428287 MMADHCQ9H3L0 296 aaPredicted RBP5.59□□□□□ -1.51
RIF1-203ENST00000428287 ROPN1Q9HAT0 212 aaPredicted RBP5.59□□□□□ -1.51
RIF1-203ENST00000428287 PRRC2CQ9Y520 2896 aaKnown RBP5.59□□□□□ -1.52
RIF1-203ENST00000428287 SHBGP04278 402 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 FLT3P36888 993 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 MAPK7Q13164 816 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 TCEAL1Q15170 157 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 CKAP2Q8WWK9 683 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 TRAPPC9Q96Q05 1148 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 USP40Q9NVE5 1235 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 SMARCAL1Q9NZC9 954 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 LMCD1Q9NZU5 365 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 ADAMTS1Q9UHI8 967 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 ARL2BPQ9Y2Y0 163 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 PTPRDP23468 1912 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 LRRD1A4D1F6 860 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 MAGEB2O15479 319 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 EVI5O60447 810 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 PALMO75781 387 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 GUCY2FP51841 1108 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 MKRN3Q13064 507 aaKnown RBP5.59□□□□□ -1.52
RIF1-203ENST00000428287 HLTFQ14527 1009 aaKnown RBP eCLIP5.59□□□□□ -1.524e-7■■□□□ 14.4
RIF1-203ENST00000428287 ZDHHC24Q6UX98 284 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 B4GALNT2Q8NHY0 566 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 HINFPQ9BQA5 517 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 POLR3CQ9BUI4 534 aaPredicted RBP5.59□□□□□ -1.52
RIF1-203ENST00000428287 PHF24Q9UPV7 400 aa5.59□□□□□ -1.52
RIF1-203ENST00000428287 NOC2LQ9Y3T9 749 aaKnown RBP5.59□□□□□ -1.52
RIF1-203ENST00000428287 COL14A1Q05707 1796 aaKnown RBP5.59□□□□□ -1.52
RIF1-203ENST00000428287 BTBD19C9JJ37 291 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 ATP5J2-PTCD1G3V325 749 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 PTCD1O75127 700 aaKnown RBP5.58□□□□□ -1.52
RIF1-203ENST00000428287 PHKG2P15735 406 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 CLCN2P51788 898 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 MRPS25P82663 173 aaKnown RBP5.58□□□□□ -1.52
RIF1-203ENST00000428287 SLC29A2Q14542 456 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 GSTA3Q16772 222 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 RHBDF2Q6PJF5 856 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 USHBP1Q8N6Y0 703 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 RBBP8NLQ8NC74 664 aaPredicted RBP5.58□□□□□ -1.52
RIF1-203ENST00000428287 STK32AQ8WU08 396 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 SLX1AQ9BQ83 275 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 DMAP1Q9NPF5 467 aaPredicted RBP5.58□□□□□ -1.52
RIF1-203ENST00000428287 RIC8AQ9NPQ8 531 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 AMACRQ9UHK6 382 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms