RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 C22orf31O95567 290 aa20.8■□□□□ 0.92
PSPC1-202ENST00000427943 MRPS5P82675 430 aaKnown RBP20.8■□□□□ 0.92
PSPC1-202ENST00000427943 TFF2Q03403 129 aa20.8■□□□□ 0.92
PSPC1-202ENST00000427943 PAK2Q13177 524 aa20.8■□□□□ 0.92
PSPC1-202ENST00000427943 NONOQ15233 471 aaKnown RBP eCLIP20.8■□□□□ 0.92
PSPC1-202ENST00000427943 UGCGQ16739 394 aa20.8■□□□□ 0.92
PSPC1-202ENST00000427943 INF2Q27J81 1249 aa20.8■□□□□ 0.92
PSPC1-202ENST00000427943 TMEM266Q2M3C6 531 aa20.8■□□□□ 0.92
PSPC1-202ENST00000427943 NME8Q8N427 588 aa20.8■□□□□ 0.92
PSPC1-202ENST00000427943 SYMPKQ92797 1274 aaKnown RBP20.8■□□□□ 0.92
PSPC1-202ENST00000427943 SLC5A5Q92911 643 aa20.8■□□□□ 0.92
PSPC1-202ENST00000427943 PHF20Q9BVI0 1012 aa20.8■□□□□ 0.92
PSPC1-202ENST00000427943 DISC1Q9NRI5 854 aa20.8■□□□□ 0.92
PSPC1-202ENST00000427943 PADI3Q9ULW8 664 aa20.8■□□□□ 0.92
PSPC1-202ENST00000427943 KDM3AQ9Y4C1 1321 aa20.79■□□□□ 0.92
PSPC1-202ENST00000427943 FNDC1Q4ZHG4 1894 aaPredicted RBP20.79■□□□□ 0.92
PSPC1-202ENST00000427943 ZNF862O60290 1169 aa20.79■□□□□ 0.92
PSPC1-202ENST00000427943 CTDNEP1O95476 244 aa20.79■□□□□ 0.92
PSPC1-202ENST00000427943 ANKRD1Q15327 319 aa20.79■□□□□ 0.92
PSPC1-202ENST00000427943 Q4G0T1 1027 aa20.79■□□□□ 0.92
PSPC1-202ENST00000427943 EPC2Q52LR7 807 aa20.79■□□□□ 0.92
PSPC1-202ENST00000427943 GALNT17Q6IS24 598 aa20.79■□□□□ 0.92
PSPC1-202ENST00000427943 KIAA0319LQ8IZA0 1049 aa20.79■□□□□ 0.92
PSPC1-202ENST00000427943 NECAB1Q8N987 351 aa20.79■□□□□ 0.92
PSPC1-202ENST00000427943 IL17RAQ96F46 866 aa20.79■□□□□ 0.92
PSPC1-202ENST00000427943 RIT2Q99578 217 aa20.79■□□□□ 0.92
PSPC1-202ENST00000427943 CDHR5Q9HBB8 845 aa20.79■□□□□ 0.92
PSPC1-202ENST00000427943 SQORQ9Y6N5 450 aa20.79■□□□□ 0.92
PSPC1-202ENST00000427943 ADGRA3Q8IWK6 1321 aa20.78■□□□□ 0.92
PSPC1-202ENST00000427943 BRWD1Q9NSI6 2320 aa20.78■□□□□ 0.92
PSPC1-202ENST00000427943 SEC24BO95487 1268 aa20.78■□□□□ 0.92
PSPC1-202ENST00000427943 PRKCEQ02156 737 aa20.78■□□□□ 0.92
PSPC1-202ENST00000427943 KRT25Q7Z3Z0 450 aa20.78■□□□□ 0.92
PSPC1-202ENST00000427943 RTN4RL1Q86UN2 441 aaPredicted RBP20.78■□□□□ 0.92
PSPC1-202ENST00000427943 FAM177A1Q8N128 213 aaPredicted RBP20.78■□□□□ 0.92
PSPC1-202ENST00000427943 METTL13Q8N6R0 699 aa20.78■□□□□ 0.92
PSPC1-202ENST00000427943 TMEM40Q8WWA1 233 aa20.78■□□□□ 0.92
PSPC1-202ENST00000427943 SAMD11Q96NU1 681 aa20.78■□□□□ 0.92
PSPC1-202ENST00000427943 LMCD1Q9NZU5 365 aa20.78■□□□□ 0.92
PSPC1-202ENST00000427943 XIRP2A4UGR9 3374 aa20.78■□□□□ 0.92
PSPC1-202ENST00000427943 PSMD10O75832 226 aa20.77■□□□□ 0.92
PSPC1-202ENST00000427943 VTNP04004 478 aa20.77■□□□□ 0.92
PSPC1-202ENST00000427943 OATP04181 439 aa20.77■□□□□ 0.92
PSPC1-202ENST00000427943 IBSPP21815 317 aaPredicted RBP20.77■□□□□ 0.92
PSPC1-202ENST00000427943 CLCN3P51790 818 aa20.77■□□□□ 0.92
PSPC1-202ENST00000427943 JAK3P52333 1124 aa20.77■□□□□ 0.92
PSPC1-202ENST00000427943 NFX1Q12986 1120 aaKnown RBP20.77■□□□□ 0.92
PSPC1-202ENST00000427943 KIZQ2M2Z5 673 aa20.77■□□□□ 0.92
PSPC1-202ENST00000427943 LETM2Q2VYF4 491 aa20.77■□□□□ 0.92
PSPC1-202ENST00000427943 TMEM192Q8IY95 271 aa20.77■□□□□ 0.92
PSPC1-202ENST00000427943 FIBCD1Q8N539 461 aa20.77■□□□□ 0.92
PSPC1-202ENST00000427943 FAM167AQ96KS9 214 aa20.77■□□□□ 0.92
PSPC1-202ENST00000427943 FTHL17Q9BXU8 183 aa20.77■□□□□ 0.92
PSPC1-202ENST00000427943 RC3H2Q9HBD1 1191 aaKnown RBP20.77■□□□□ 0.92
PSPC1-202ENST00000427943 ORC3Q9UBD5 711 aaPredicted RBP20.77■□□□□ 0.92
PSPC1-202ENST00000427943 DDX25Q9UHL0 483 aaKnown RBP20.77■□□□□ 0.92
PSPC1-202ENST00000427943 CEP131Q9UPN4 1083 aa20.77■□□□□ 0.92
PSPC1-202ENST00000427943 NOC2LQ9Y3T9 749 aaKnown RBP20.77■□□□□ 0.92
PSPC1-202ENST00000427943 TTC28Q96AY4 2481 aa20.77■□□□□ 0.91
PSPC1-202ENST00000427943 ARID2Q68CP9 1835 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 CYP3A7-CYP3A51PA0A087WV96 503 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 CCDC194A0A1B0GVG4 234 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 SLC37A4O43826 429 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 XBP1P17861 261 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 CYP3A7P24462 503 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 SFNP31947 248 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 CTNNB1P35222 781 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 KCNQ1P51787 676 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 ME3Q16798 604 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 MOXD1Q6UVY6 613 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 MIER3Q7Z3K6 550 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 IL27Q8NEV9 243 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 ETNPPLQ8TBG4 499 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 OXER1Q8TDS5 423 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 ADAMTS19Q8TE59 1207 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 MBOAT7Q96N66 472 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 OSMRQ99650 979 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 TMX1Q9H3N1 280 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 ERVK-5Q9HDB9 667 aa20.76■□□□□ 0.91
PSPC1-202ENST00000427943 PLXNA4Q9HCM2 1894 aa20.75■□□□□ 0.91
PSPC1-202ENST00000427943 RPS6KA5O75582 802 aa20.75■□□□□ 0.91
PSPC1-202ENST00000427943 GPM6BQ13491 265 aa20.75■□□□□ 0.91
PSPC1-202ENST00000427943 LRRC71Q8N4P6 559 aa20.75■□□□□ 0.91
PSPC1-202ENST00000427943 GTF3C6Q969F1 213 aa20.75■□□□□ 0.91
PSPC1-202ENST00000427943 ZNF689Q96CS4 500 aaPredicted RBP20.75■□□□□ 0.91
PSPC1-202ENST00000427943 H3BNC9 293 aa20.74■□□□□ 0.91
PSPC1-202ENST00000427943 MGEA5O60502 916 aa20.74■□□□□ 0.91
PSPC1-202ENST00000427943 DGKIO75912 1065 aa20.74■□□□□ 0.91
PSPC1-202ENST00000427943 LINC00271P0C7V0 271 aa20.74■□□□□ 0.91
PSPC1-202ENST00000427943 FDPSP14324 419 aaKnown RBP20.74■□□□□ 0.91
PSPC1-202ENST00000427943 NEK4P51957 841 aa20.74■□□□□ 0.91
PSPC1-202ENST00000427943 FOSBP53539 338 aa20.74■□□□□ 0.91
PSPC1-202ENST00000427943 BTG3Q14201 252 aaPredicted RBP20.74■□□□□ 0.91
PSPC1-202ENST00000427943 EFCAB12Q6NXP0 572 aa20.74■□□□□ 0.91
PSPC1-202ENST00000427943 PIK3AP1Q6ZUJ8 805 aa20.74■□□□□ 0.91
PSPC1-202ENST00000427943 NEK8Q86SG6 692 aa20.74■□□□□ 0.91
PSPC1-202ENST00000427943 NPAS4Q8IUM7 802 aa20.74■□□□□ 0.91
PSPC1-202ENST00000427943 SEPT9Q9UHD8 586 aaPredicted RBP20.74■□□□□ 0.91
PSPC1-202ENST00000427943 COG5Q9UP83 839 aa20.74■□□□□ 0.91
PSPC1-202ENST00000427943 AKT3Q9Y243 479 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms