RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 TCP10Q12799 353 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 ABCB5Q2M3G0 1257 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 PPP1R2P1Q96PQ5 205 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 RASA4BC9J798 803 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 RASA4O43374 803 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 HSPA1AP0DMV8 641 aaKnown RBP15.43■□□□□ 0.06
PTPN13-203ENST00000427191 HSPA1BP0DMV9 641 aaKnown RBP15.43■□□□□ 0.06
PTPN13-203ENST00000427191 FAM173BQ6P4H8 233 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 TBK1Q9UHD2 729 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 AP5M1Q9H0R1 490 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 BATF3Q9NR55 127 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 PKD2L2Q9NZM6 624 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 TCOF1Q13428 1488 aaKnown RBP15.43■□□□□ 0.06
PTPN13-203ENST00000427191 SYNJ2BP-COX16A0A087WUM0 186 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 USP17L12C9JPN9 530 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 USP17L21D6R901 530 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 RPS8P62241 208 aaKnown RBP15.43■□□□□ 0.06
PTPN13-203ENST00000427191 KRR1Q13601 381 aaKnown RBP15.43■□□□□ 0.06
PTPN13-203ENST00000427191 POLA2Q14181 598 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 SUCLG2Q96I99 432 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 COX16Q9P0S2 106 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 LRFN2Q9ULH4 789 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 ITM2BQ9Y287 266 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 SYNMO15061 1565 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 RNF103-CHMP3A0A140T963 221 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 ITPRIPL1Q6GPH6 555 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 TRIM54Q9BYV2 358 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 NOVA2Q9UNW9 492 aaKnown RBP15.43■□□□□ 0.06
PTPN13-203ENST00000427191 RAB42Q8N4Z0 105 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 DTX3LQ8TDB6 740 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 SSH3Q8TE77 659 aa15.43■□□□□ 0.06
PTPN13-203ENST00000427191 INPP5AQ14642 412 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 DDX42Q86XP3 938 aaKnown RBP eCLIP15.42■□□□□ 0.06
PTPN13-203ENST00000427191 TNIP2Q8NFZ5 429 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 UHMK1Q8TAS1 419 aaKnown RBP15.42■□□□□ 0.06
PTPN13-203ENST00000427191 TAP1Q03518 808 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 C1orf228Q6PIY5 440 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 ZNF555Q8NEP9 628 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 PBXIP1Q96AQ6 731 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 PSAPP07602 524 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 SEL1LQ9UBV2 794 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 PRR23D1E9PI22 279 aaPredicted RBP15.42■□□□□ 0.06
PTPN13-203ENST00000427191 PRR23D2P0DMB1 279 aaPredicted RBP15.42■□□□□ 0.06
PTPN13-203ENST00000427191 WASHC5Q12768 1159 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 LAMB3Q13751 1172 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 TOGARAM2Q6ZUX3 1019 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 MMTAG2Q9BU76 263 aaKnown RBP15.42■□□□□ 0.06
PTPN13-203ENST00000427191 PARD6BQ9BYG5 372 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 FBLN1P23142 703 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 PSMA2P25787 234 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 NAALADL2Q58DX5 795 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 KIAA1841Q6NSI8 718 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 ZBTB38Q8NAP3 1195 aaPredicted RBP15.42■□□□□ 0.06
PTPN13-203ENST00000427191 GOLPH3LQ9H4A5 285 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 TBC1D23Q9NUY8 699 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 PPIP5K2O43314 1243 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 RECQLP46063 649 aaPredicted RBP15.42■□□□□ 0.06
PTPN13-203ENST00000427191 ZBTB41Q5SVQ8 909 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 ARMC2Q8NEN0 867 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 FAF2Q96CS3 445 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 ASNSD1Q9NWL6 643 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 USP19O94966 1318 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 FAM47AQ5JRC9 791 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 SLFN13Q68D06 897 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 NOP9Q86U38 636 aaKnown RBP15.42■□□□□ 0.06
PTPN13-203ENST00000427191 PI4K2BQ8TCG2 481 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 BPIFA3Q9BQP9 254 aa15.42■□□□□ 0.06
PTPN13-203ENST00000427191 UBE2TQ9NPD8 197 aaPredicted RBP15.42■□□□□ 0.06
PTPN13-203ENST00000427191 PDIA3P30101 505 aaKnown RBP15.41■□□□□ 0.06
PTPN13-203ENST00000427191 TMEM259Q4ZIN3 620 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 INTUQ9ULD6 942 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 MAP3K19Q56UN5 1328 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 A0A0G2JND7 137 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 OSBPP22059 807 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 TBXAS1P24557 533 aaPredicted RBP15.41■□□□□ 0.06
PTPN13-203ENST00000427191 DAB2P98082 770 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 RNF219Q5W0B1 726 aaPredicted RBP15.41■□□□□ 0.06
PTPN13-203ENST00000427191 KIAA2013Q8IYS2 634 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 FAM133AQ8N9E0 248 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 FBXW4P57775 412 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 SH3TC2Q8TF17 1288 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 TADA1Q96BN2 335 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 PHACTR3Q96KR7 559 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 RPF1Q9H9Y2 349 aaKnown RBP15.41■□□□□ 0.06
PTPN13-203ENST00000427191 DDX56Q9NY93 547 aaKnown RBP15.41■□□□□ 0.06
PTPN13-203ENST00000427191 PLAAQ9Y263 795 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 ATP11BQ9Y2G3 1177 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 KRT7P08729 469 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 CLCN6P51797 869 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 TNFAIP2Q03169 654 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 POTEAQ6S8J7 498 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 SLC26A7Q8TE54 656 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 NDEL1Q9GZM8 345 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 FRMPD2Q68DX3 1309 aaPredicted RBP15.41■□□□□ 0.06
PTPN13-203ENST00000427191 JAK3P52333 1124 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 DYDC2Q96IM9 177 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 TSSK1BQ9BXA7 367 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 SPTLC3Q9NUV7 552 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 SELENONQ9NZV5 590 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 PFASO15067 1338 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms