RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 SHC4Q6S5L8 630 aa17.22■□□□□ 0.35
PHF1-203ENST00000427004 CABP7Q86V35 215 aa17.22■□□□□ 0.35
PHF1-203ENST00000427004 RDM1Q8NG50 284 aa17.22■□□□□ 0.35
PHF1-203ENST00000427004 SPATA32Q96LK8 384 aa17.22■□□□□ 0.35
PHF1-203ENST00000427004 TMEM39AQ9NV64 488 aa17.22■□□□□ 0.35
PHF1-203ENST00000427004 CEP131Q9UPN4 1083 aa17.22■□□□□ 0.35
PHF1-203ENST00000427004 TET1Q8NFU7 2136 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 HBP1O60381 514 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 C22orf31O95567 290 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 CLTBP09497 229 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 HOXC8P31273 242 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 ME1P48163 572 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 KRT85P78386 507 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 MKRN4PQ13434 485 aaPredicted RBP17.21■□□□□ 0.35
PHF1-203ENST00000427004 TRIM71Q2Q1W2 868 aaKnown RBP17.21■□□□□ 0.35
PHF1-203ENST00000427004 XKR9Q5GH70 373 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 XKR3Q5GH77 459 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 MTHFD1LQ6UB35 978 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 ANKRD33Q7Z3H0 272 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 PDILTQ8N807 584 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 KRI1Q8N9T8 703 aaKnown RBP17.21■□□□□ 0.35
PHF1-203ENST00000427004 DNAJB3Q8WWF6 145 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 BBXQ8WY36 941 aaPredicted RBP17.21■□□□□ 0.35
PHF1-203ENST00000427004 TUBE1Q9UJT0 475 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 RCOR1Q9UKL0 485 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 TBX21Q9UL17 535 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 NOD1Q9Y239 953 aa17.21■□□□□ 0.35
PHF1-203ENST00000427004 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.2■□□□□ 0.34
PHF1-203ENST00000427004 NPHP3-ACAD11A0A0J9YXS1 232 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 DCDC2CA8MYV0 355 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 USO1O60763 962 aaKnown RBP17.2■□□□□ 0.34
PHF1-203ENST00000427004 YEATS4O95619 227 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 VTNP04004 478 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 PLCG1P19174 1290 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 MDM2Q00987 491 aaPredicted RBP17.2■□□□□ 0.34
PHF1-203ENST00000427004 CACNB1Q02641 598 aaPredicted RBP17.2■□□□□ 0.34
PHF1-203ENST00000427004 RAD51AP2Q09MP3 1159 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 TARBP2Q15633 366 aaKnown RBP17.2■□□□□ 0.34
PHF1-203ENST00000427004 SESTD1Q86VW0 696 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 C4orf19Q8IY42 314 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 METTL13Q8N6R0 699 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 CEP170P1Q96L14 293 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 POLR3CQ9BUI4 534 aaPredicted RBP17.2■□□□□ 0.34
PHF1-203ENST00000427004 HTATIP2Q9BUP3 242 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 NOC4LQ9BVI4 516 aaKnown RBP17.2■□□□□ 0.34
PHF1-203ENST00000427004 WNT8AQ9H1J5 351 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 ZSWIM4Q9H7M6 989 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 SUGCTQ9HAC7 445 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 CDHR5Q9HBB8 845 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 GPRC5CQ9NQ84 441 aa17.2■□□□□ 0.34
PHF1-203ENST00000427004 GADD45BO75293 160 aaPredicted RBP17.19■□□□□ 0.34
PHF1-203ENST00000427004 BMP15O95972 392 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 RPA1P27694 616 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 PDIA5Q14554 519 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 TCTN1Q2MV58 587 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 TMEM119Q4V9L6 283 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 ZNF618Q5T7W0 954 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 C1orf53Q5VUE5 145 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 KRT79Q5XKE5 535 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 KSR1Q8IVT5 923 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 ERMNQ8TAM6 284 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 STAMQ92783 540 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 TMEM143Q96AN5 459 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 GOLPH3LQ9H4A5 285 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 TUFT1Q9NNX1 390 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 XPNPEP1Q9NQW7 623 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 CYP26B1Q9NR63 512 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 NRBP2Q9NSY0 501 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 CIZ1Q9ULV3 898 aaPredicted RBP17.19■□□□□ 0.34
PHF1-203ENST00000427004 TRIOBPQ9H2D6 2365 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 NRCAMQ92823 1304 aa17.19■□□□□ 0.34
PHF1-203ENST00000427004 H0YGN5 161 aa17.18■□□□□ 0.34
PHF1-203ENST00000427004 TLR3O15455 904 aaKnown RBP17.18■□□□□ 0.34
PHF1-203ENST00000427004 SSBP05455 408 aaKnown RBP eCLIP17.18■□□□□ 0.34
PHF1-203ENST00000427004 LONP1P36776 959 aaKnown RBP17.18■□□□□ 0.34
PHF1-203ENST00000427004 THPOP40225 353 aa17.18■□□□□ 0.34
PHF1-203ENST00000427004 MCM6Q14566 821 aa17.18■□□□□ 0.34
PHF1-203ENST00000427004 MBTPS1Q14703 1052 aa17.18■□□□□ 0.34
PHF1-203ENST00000427004 ZNF484Q5JVG2 852 aa17.18■□□□□ 0.34
PHF1-203ENST00000427004 EFCAB12Q6NXP0 572 aa17.18■□□□□ 0.34
PHF1-203ENST00000427004 TRAF7Q6Q0C0 670 aa17.18■□□□□ 0.34
PHF1-203ENST00000427004 SERINC5Q86VE9 423 aa17.18■□□□□ 0.34
PHF1-203ENST00000427004 BADQ92934 168 aa17.18■□□□□ 0.34
PHF1-203ENST00000427004 RUSC1Q9BVN2 902 aa17.18■□□□□ 0.34
PHF1-203ENST00000427004 NIFKQ9BYG3 293 aaKnown RBP17.18■□□□□ 0.34
PHF1-203ENST00000427004 BHMT2Q9H2M3 363 aa17.18■□□□□ 0.34
PHF1-203ENST00000427004 BLOC1S4Q9NUP1 217 aa17.18■□□□□ 0.34
PHF1-203ENST00000427004 MYH11P35749 1972 aa17.17■□□□□ 0.34
PHF1-203ENST00000427004 A0A1B0GVL5 298 aa17.17■□□□□ 0.34
PHF1-203ENST00000427004 MBLAC1A4D2B0 266 aaPredicted RBP17.17■□□□□ 0.34
PHF1-203ENST00000427004 CUTAO60888 179 aa17.17■□□□□ 0.34
PHF1-203ENST00000427004 PPP6R2O75170 966 aa17.17■□□□□ 0.34
PHF1-203ENST00000427004 CSDE1O75534 798 aaKnown RBP17.17■□□□□ 0.34
PHF1-203ENST00000427004 ACRP10323 421 aa17.17■□□□□ 0.34
PHF1-203ENST00000427004 UBA7P41226 1012 aa17.17■□□□□ 0.34
PHF1-203ENST00000427004 RARRES1P49788 294 aa17.17■□□□□ 0.34
PHF1-203ENST00000427004 EPHB4P54760 987 aa17.17■□□□□ 0.34
PHF1-203ENST00000427004 PTPN11Q06124 597 aaPredicted RBP17.17■□□□□ 0.34
PHF1-203ENST00000427004 GPNMBQ14956 572 aa17.17■□□□□ 0.34
PHF1-203ENST00000427004 HABP4Q5JVS0 413 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms