RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 TIFAQ96CG3 184 aa19.37■□□□□ 0.69
LMCD1-204ENST00000426878 NIFKQ9BYG3 293 aaKnown RBP19.37■□□□□ 0.69
LMCD1-204ENST00000426878 SEMA6BQ9H3T3 888 aa19.37■□□□□ 0.69
LMCD1-204ENST00000426878 MSRAQ9UJ68 235 aa19.37■□□□□ 0.69
LMCD1-204ENST00000426878 PCDHA12Q9UN75 941 aa19.37■□□□□ 0.69
LMCD1-204ENST00000426878 PCDHA11Q9Y5I1 949 aa19.37■□□□□ 0.69
LMCD1-204ENST00000426878 CDY2AQ9Y6F7 541 aa19.37■□□□□ 0.69
LMCD1-204ENST00000426878 CDH23Q9H251 3354 aa19.37■□□□□ 0.69
LMCD1-204ENST00000426878 EVPLQ92817 2033 aa19.36■□□□□ 0.69
LMCD1-204ENST00000426878 KIF28PB7ZC32 967 aa19.36■□□□□ 0.69
LMCD1-204ENST00000426878 DKC1O60832 514 aaKnown RBP eCLIP19.36■□□□□ 0.69
LMCD1-204ENST00000426878 P4HBP07237 508 aaKnown RBP19.36■□□□□ 0.69
LMCD1-204ENST00000426878 PBX2P40425 430 aa19.36■□□□□ 0.69
LMCD1-204ENST00000426878 QARSP47897 775 aaKnown RBP19.36■□□□□ 0.69
LMCD1-204ENST00000426878 GNL2Q13823 731 aaKnown RBP19.36■□□□□ 0.69
LMCD1-204ENST00000426878 USP38Q8NB14 1042 aa19.36■□□□□ 0.69
LMCD1-204ENST00000426878 IFIH1Q9BYX4 1025 aaKnown RBP19.36■□□□□ 0.69
LMCD1-204ENST00000426878 TTYH1Q9H313 450 aaPredicted RBP19.36■□□□□ 0.69
LMCD1-204ENST00000426878 TRPV2Q9Y5S1 764 aa19.36■□□□□ 0.69
LMCD1-204ENST00000426878 SIP14410 1827 aa19.36■□□□□ 0.69
LMCD1-204ENST00000426878 M0QZ92 97 aa19.35■□□□□ 0.69
LMCD1-204ENST00000426878 LPIN1Q14693 890 aa19.35■□□□□ 0.69
LMCD1-204ENST00000426878 FAM43BQ6ZT52 329 aaPredicted RBP19.35■□□□□ 0.69
LMCD1-204ENST00000426878 HERC6Q8IVU3 1022 aa19.35■□□□□ 0.69
LMCD1-204ENST00000426878 LINC01465Q8N7H1 131 aa19.35■□□□□ 0.69
LMCD1-204ENST00000426878 CELF4Q9BZC1 486 aaKnown RBP19.35■□□□□ 0.69
LMCD1-204ENST00000426878 SMC3Q9UQE7 1217 aa19.35■□□□□ 0.69
LMCD1-204ENST00000426878 GHRP10912 638 aa19.34■□□□□ 0.69
LMCD1-204ENST00000426878 MCM7P33993 719 aa19.34■□□□□ 0.69
LMCD1-204ENST00000426878 TSHZ1Q6ZSZ6 1077 aa19.34■□□□□ 0.69
LMCD1-204ENST00000426878 TRMT1LQ7Z2T5 733 aaKnown RBP19.34■□□□□ 0.69
LMCD1-204ENST00000426878 ZNF710Q8N1W2 664 aa19.34■□□□□ 0.69
LMCD1-204ENST00000426878 BANK1Q8NDB2 785 aa19.34■□□□□ 0.69
LMCD1-204ENST00000426878 CEP89Q96ST8 783 aa19.34■□□□□ 0.69
LMCD1-204ENST00000426878 TMEM60Q9H2L4 133 aa19.34■□□□□ 0.69
LMCD1-204ENST00000426878 TTC12Q9H892 705 aaPredicted RBP19.34■□□□□ 0.69
LMCD1-204ENST00000426878 NOL7Q9UMY1 257 aaKnown RBP19.34■□□□□ 0.69
LMCD1-204ENST00000426878 GBF1Q92538 1859 aa19.34■□□□□ 0.69
LMCD1-204ENST00000426878 MICAL3Q7RTP6 2002 aa19.34■□□□□ 0.69
LMCD1-204ENST00000426878 ATP2B1P20020 1258 aa19.34■□□□□ 0.69
LMCD1-204ENST00000426878 TMOD1P28289 359 aa19.34■□□□□ 0.69
LMCD1-204ENST00000426878 RABGGTBP53611 331 aa19.34■□□□□ 0.69
LMCD1-204ENST00000426878 NCAPH2Q6IBW4 605 aa19.34■□□□□ 0.69
LMCD1-204ENST00000426878 ANO5Q75V66 913 aa19.34■□□□□ 0.69
LMCD1-204ENST00000426878 C4orf19Q8IY42 314 aa19.34■□□□□ 0.69
LMCD1-204ENST00000426878 YBX2Q9Y2T7 364 aaKnown RBP19.34■□□□□ 0.69
LMCD1-204ENST00000426878 PTPRSQ13332 1948 aa19.33■□□□□ 0.69
LMCD1-204ENST00000426878 CHD7Q9P2D1 2997 aa19.33■□□□□ 0.69
LMCD1-204ENST00000426878 TXKP42681 527 aa19.33■□□□□ 0.68
LMCD1-204ENST00000426878 DEFB103AP81534 67 aa19.33■□□□□ 0.68
LMCD1-204ENST00000426878 TBC1D8BQ0IIM8 1120 aa19.33■□□□□ 0.68
LMCD1-204ENST00000426878 TMEM62Q0P6H9 643 aa19.33■□□□□ 0.68
LMCD1-204ENST00000426878 TTC38Q5R3I4 469 aa19.33■□□□□ 0.68
LMCD1-204ENST00000426878 EFCAB12Q6NXP0 572 aa19.33■□□□□ 0.68
LMCD1-204ENST00000426878 METTL13Q8N6R0 699 aa19.33■□□□□ 0.68
LMCD1-204ENST00000426878 GUCD1Q96NT3 240 aa19.33■□□□□ 0.68
LMCD1-204ENST00000426878 HSD17B14Q9BPX1 270 aa19.33■□□□□ 0.68
LMCD1-204ENST00000426878 LXNQ9BS40 222 aa19.33■□□□□ 0.68
LMCD1-204ENST00000426878 ZNF576Q9H609 170 aa19.33■□□□□ 0.68
LMCD1-204ENST00000426878 ZSWIM4Q9H7M6 989 aa19.33■□□□□ 0.68
LMCD1-204ENST00000426878 SEPT9Q9UHD8 586 aaPredicted RBP19.33■□□□□ 0.68
LMCD1-204ENST00000426878 PPME1Q9Y570 386 aa19.33■□□□□ 0.68
LMCD1-204ENST00000426878 COL6A3P12111 3177 aa19.32■□□□□ 0.68
LMCD1-204ENST00000426878 IGKV6-21A0A0C4DH24 114 aa19.32■□□□□ 0.68
LMCD1-204ENST00000426878 DDX11L8A8MPP1 907 aa19.32■□□□□ 0.68
LMCD1-204ENST00000426878 SLITRK3O94933 977 aa19.32■□□□□ 0.68
LMCD1-204ENST00000426878 LYPLA2O95372 231 aa19.32■□□□□ 0.68
LMCD1-204ENST00000426878 GJB5O95377 273 aa19.32■□□□□ 0.68
LMCD1-204ENST00000426878 AMHP03971 560 aa19.32■□□□□ 0.68
LMCD1-204ENST00000426878 TOB1P50616 345 aaPredicted RBP19.32■□□□□ 0.68
LMCD1-204ENST00000426878 ZNF174Q15697 407 aa19.32■□□□□ 0.68
LMCD1-204ENST00000426878 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.32■□□□□ 0.68
LMCD1-204ENST00000426878 NEK9Q8TD19 979 aa19.32■□□□□ 0.68
LMCD1-204ENST00000426878 AGO3Q9H9G7 860 aaKnown RBP19.32■□□□□ 0.68
LMCD1-204ENST00000426878 SLC28A3Q9HAS3 691 aa19.32■□□□□ 0.68
LMCD1-204ENST00000426878 RGL1Q9NZL6 768 aa19.32■□□□□ 0.68
LMCD1-204ENST00000426878 WRAP73Q9P2S5 460 aaPredicted RBP19.32■□□□□ 0.68
LMCD1-204ENST00000426878 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.31■□□□□ 0.68
LMCD1-204ENST00000426878 H3BQV1 296 aa19.31■□□□□ 0.68
LMCD1-204ENST00000426878 GPR32O75388 356 aa19.31■□□□□ 0.68
LMCD1-204ENST00000426878 OR52Z1P0C646 297 aa19.31■□□□□ 0.68
LMCD1-204ENST00000426878 CRYBB1P53674 252 aaPredicted RBP19.31■□□□□ 0.68
LMCD1-204ENST00000426878 MTERF2Q49AM1 385 aa19.31■□□□□ 0.68
LMCD1-204ENST00000426878 LARP1BQ659C4 914 aaKnown RBP19.31■□□□□ 0.68
LMCD1-204ENST00000426878 C4orf32Q8N8J7 132 aa19.31■□□□□ 0.68
LMCD1-204ENST00000426878 INTS4Q96HW7 963 aaKnown RBP19.31■□□□□ 0.68
LMCD1-204ENST00000426878 DYDC2Q96IM9 177 aa19.31■□□□□ 0.68
LMCD1-204ENST00000426878 MAP7D2Q96T17 732 aa19.31■□□□□ 0.68
LMCD1-204ENST00000426878 EIF2AK1Q9BQI3 630 aaKnown RBP19.31■□□□□ 0.68
LMCD1-204ENST00000426878 NKX2-4Q9H2Z4 354 aa19.31■□□□□ 0.68
LMCD1-204ENST00000426878 LOXHD1Q8IVV2 1947 aa19.3■□□□□ 0.68
LMCD1-204ENST00000426878 TMEM150BA6NC51 233 aa19.3■□□□□ 0.68
LMCD1-204ENST00000426878 TLL1O43897 1013 aa19.3■□□□□ 0.68
LMCD1-204ENST00000426878 MAFO75444 373 aaPredicted RBP19.3■□□□□ 0.68
LMCD1-204ENST00000426878 MYOGP15173 224 aa19.3■□□□□ 0.68
LMCD1-204ENST00000426878 CD52P31358 61 aa19.3■□□□□ 0.68
LMCD1-204ENST00000426878 CLCN3P51790 818 aa19.3■□□□□ 0.68
LMCD1-204ENST00000426878 CDC42EP1Q00587 391 aa19.3■□□□□ 0.68
LMCD1-204ENST00000426878 OTUD6AQ7L8S5 288 aa19.3■□□□□ 0.68
LMCD1-204ENST00000426878 EXOC8Q8IYI6 725 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms