RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 PSMC4P43686 418 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 NPEPPSP55786 919 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 LRRC41Q15345 812 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 PLA2G4FQ68DD2 849 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 IQSEC1Q6DN90 963 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 MAEAQ7L5Y9 396 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 SFR1Q86XK3 245 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 GLG1Q92896 1179 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 P2RX5Q93086 422 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 KATNBL1Q9H079 304 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 MRPL44Q9H9J2 332 aaKnown RBP16.73■□□□□ 0.27
GINS3-203ENST00000426538 SEL1LQ9UBV2 794 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 PCDHA2Q9Y5H9 948 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 LACTBP83111 547 aaPredicted RBP16.73■□□□□ 0.27
GINS3-203ENST00000426538 KIF22Q14807 665 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 AFAP1L1Q8TED9 768 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 TRIM47Q96LD4 638 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 PPP1R9BQ96SB3 815 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 APBA2Q99767 749 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 HSD3B7Q9H2F3 369 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 OLFML3Q9NRN5 406 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 SAMSN1Q9NSI8 373 aaKnown RBP16.73■□□□□ 0.27
GINS3-203ENST00000426538 LARSQ9P2J5 1176 aaKnown RBP16.73■□□□□ 0.27
GINS3-203ENST00000426538 DOCK3Q8IZD9 2030 aa16.73■□□□□ 0.27
GINS3-203ENST00000426538 MYH9P35579 1960 aaKnown RBP16.72■□□□□ 0.27
GINS3-203ENST00000426538 NKRFO15226 690 aaKnown RBP eCLIP16.72■□□□□ 0.27
GINS3-203ENST00000426538 HIP1RO75146 1068 aa16.72■□□□□ 0.27
GINS3-203ENST00000426538 STBD1O95210 358 aa16.72■□□□□ 0.27
GINS3-203ENST00000426538 TBC1D8O95759 1140 aa16.72■□□□□ 0.27
GINS3-203ENST00000426538 OATP04181 439 aa16.72■□□□□ 0.27
GINS3-203ENST00000426538 ATP1A3P13637 1013 aa16.72■□□□□ 0.27
GINS3-203ENST00000426538 FANCCQ00597 558 aa16.72■□□□□ 0.27
GINS3-203ENST00000426538 HSP90AA4PQ58FG1 418 aa16.72■□□□□ 0.27
GINS3-203ENST00000426538 ODR4Q5SWX8 454 aa16.72■□□□□ 0.27
GINS3-203ENST00000426538 TMEM63BQ5T3F8 832 aa16.72■□□□□ 0.27
GINS3-203ENST00000426538 OLFML2BQ68BL8 750 aa16.72■□□□□ 0.27
GINS3-203ENST00000426538 CENPPQ6IPU0 288 aa16.72■□□□□ 0.27
GINS3-203ENST00000426538 PDLIM2Q96JY6 352 aa16.72■□□□□ 0.27
GINS3-203ENST00000426538 DRC1Q96MC2 740 aa16.72■□□□□ 0.27
GINS3-203ENST00000426538 CYP26B1Q9NR63 512 aa16.72■□□□□ 0.27
GINS3-203ENST00000426538 WDR81Q562E7 1941 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 TRIM49BA6NDI0 452 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 DGAT1O75907 488 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 GCNT3O95395 438 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 ZNF75DP51815 510 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 ZNF131P52739 623 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 SP3Q02447 781 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 ARHGAP1Q07960 439 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 IRF5Q13568 498 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 CCDC144BQ3MJ40 725 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 DUSP28Q4G0W2 176 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 ANKRD40Q6AI12 368 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 PLPPR4Q7Z2D5 763 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 FAM178BQ8IXR5 827 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 FAM167AQ96KS9 214 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 PCYT2Q99447 389 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 TSG101Q99816 390 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 SMARCAD1Q9H4L7 1026 aa16.71■□□□□ 0.27
GINS3-203ENST00000426538 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.7■□□□□ 0.26
GINS3-203ENST00000426538 LGR5O75473 907 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 TRPA1O75762 1119 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 ZNF18P17022 549 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 ATP4AP20648 1035 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 VEGFBP49765 207 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 PMS1P54277 932 aaKnown RBP16.7■□□□□ 0.26
GINS3-203ENST00000426538 TNFAIP2Q03169 654 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 LRRC63Q05C16 580 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 MTERF2Q49AM1 385 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 FAM102BQ5T8I3 360 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 STXBP4Q6ZWJ1 553 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 CREBRFQ8IUR6 639 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 DRC7Q8IY82 874 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 CSGALNACT2Q8N6G5 542 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 GLIS3Q8NEA6 775 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 ANKRD20A12PQ8NF67 263 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 EMID1Q96A84 441 aaPredicted RBP16.7■□□□□ 0.26
GINS3-203ENST00000426538 SRRTQ9BXP5 876 aaKnown RBP16.7■□□□□ 0.26
GINS3-203ENST00000426538 SEMA6BQ9H3T3 888 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 FLRT1Q9NZU1 646 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 IFNKQ9P0W0 207 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 CBFA2T2O43439 604 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 FGFR1OPO95684 399 aaKnown RBP16.7■□□□□ 0.26
GINS3-203ENST00000426538 TPM3P06753 285 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 CTGFP29279 349 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 CYP2C19P33261 490 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 SLC26A2P50443 739 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 UBASH3AP57075 661 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 CCL14Q16627 93 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 PRAMEF19Q5SWL8 479 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 GJC2Q5T442 439 aaPredicted RBP16.7■□□□□ 0.26
GINS3-203ENST00000426538 TTI2Q6NXR4 508 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 MCPH1Q8NEM0 835 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 PPTC7Q8NI37 304 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 NOC3LQ8WTT2 800 aaKnown RBP16.7■□□□□ 0.26
GINS3-203ENST00000426538 SCFD1Q8WVM8 642 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 MRFAP1L1Q96HT8 127 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 CTAGE1Q96RT6 745 aa16.7■□□□□ 0.26
GINS3-203ENST00000426538 NIFKQ9BYG3 293 aaKnown RBP16.7■□□□□ 0.26
GINS3-203ENST00000426538 EMSYQ7Z589 1322 aa16.69■□□□□ 0.26
GINS3-203ENST00000426538 XRCC5P13010 732 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms