RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 MED19A0JLT2 244 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-206ENST00000426196 HIDE1A8MVS5 230 aa16.29■□□□□ 0.2
HDAC6-206ENST00000426196 PPM1AP35813 382 aa16.29■□□□□ 0.2
HDAC6-206ENST00000426196 GRM4Q14833 912 aa16.29■□□□□ 0.2
HDAC6-206ENST00000426196 SEC23AQ15436 765 aa16.29■□□□□ 0.2
HDAC6-206ENST00000426196 SLC35G1Q2M3R5 365 aa16.29■□□□□ 0.2
HDAC6-206ENST00000426196 FAM102BQ5T8I3 360 aa16.29■□□□□ 0.2
HDAC6-206ENST00000426196 SLC24A5Q71RS6 500 aa16.29■□□□□ 0.2
HDAC6-206ENST00000426196 NME8Q8N427 588 aa16.29■□□□□ 0.2
HDAC6-206ENST00000426196 KCNG4Q8TDN1 519 aa16.29■□□□□ 0.2
HDAC6-206ENST00000426196 ADAM2Q99965 735 aa16.29■□□□□ 0.2
HDAC6-206ENST00000426196 AZI2Q9H6S1 392 aa16.29■□□□□ 0.2
HDAC6-206ENST00000426196 ATP6V0A4Q9HBG4 840 aa16.29■□□□□ 0.2
HDAC6-206ENST00000426196 ACACBO00763 2458 aa16.29■□□□□ 0.2
HDAC6-206ENST00000426196 OTOGLQ3ZCN5 2332 aa16.29■□□□□ 0.2
HDAC6-206ENST00000426196 SPTBN2O15020 2390 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 CYTH3O43739 400 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 ATP9AO75110 1047 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 RPS6KA5O75582 802 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 KRT17Q04695 432 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 ANGPT1Q15389 498 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 CWF19L1Q69YN2 538 aaKnown RBP16.28■□□□□ 0.2
HDAC6-206ENST00000426196 TMC7Q7Z402 723 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 CCDC105Q8IYK2 499 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 ZDHHC14Q8IZN3 488 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 PLCD3Q8N3E9 789 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 RMDN1Q96DB5 314 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 CWH43Q9H720 699 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 ERVK-5Q9HDB9 667 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 RGS18Q9NS28 235 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 LIMD1Q9UGP4 676 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 GINS2Q9Y248 185 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 HCFC2Q9Y5Z7 792 aa16.28■□□□□ 0.2
HDAC6-206ENST00000426196 SMIM35A0A1B0GVV1 85 aa16.27■□□□□ 0.2
HDAC6-206ENST00000426196 MGEA5O60502 916 aa16.27■□□□□ 0.2
HDAC6-206ENST00000426196 AOC1P19801 751 aa16.27■□□□□ 0.2
HDAC6-206ENST00000426196 SDSP20132 328 aa16.27■□□□□ 0.2
HDAC6-206ENST00000426196 PDE4AP27815 886 aa16.27■□□□□ 0.2
HDAC6-206ENST00000426196 SMC1AQ14683 1233 aaKnown RBP16.27■□□□□ 0.2
HDAC6-206ENST00000426196 USP17L6PQ6QN14 398 aa16.27■□□□□ 0.2
HDAC6-206ENST00000426196 TRAPPC12Q8WVT3 735 aa16.27■□□□□ 0.2
HDAC6-206ENST00000426196 PIBF1Q8WXW3 757 aa16.27■□□□□ 0.2
HDAC6-206ENST00000426196 RTP3Q9BQQ7 232 aa16.27■□□□□ 0.2
HDAC6-206ENST00000426196 SEMA4AQ9H3S1 761 aa16.27■□□□□ 0.2
HDAC6-206ENST00000426196 PKD2L1Q9P0L9 805 aa16.27■□□□□ 0.2
HDAC6-206ENST00000426196 C9IYK1 514 aa16.26■□□□□ 0.19
HDAC6-206ENST00000426196 PIK3CDO00329 1044 aa16.26■□□□□ 0.19
HDAC6-206ENST00000426196 LMNAP02545 664 aaKnown RBP16.26■□□□□ 0.19
HDAC6-206ENST00000426196 FGFR1P11362 822 aa16.26■□□□□ 0.19
HDAC6-206ENST00000426196 MTMR1Q13613 665 aa16.26■□□□□ 0.19
HDAC6-206ENST00000426196 KCNT2Q6UVM3 1135 aa16.26■□□□□ 0.19
HDAC6-206ENST00000426196 ZNF558Q96NG5 402 aa16.26■□□□□ 0.19
HDAC6-206ENST00000426196 DSCC1Q9BVC3 393 aa16.26■□□□□ 0.19
HDAC6-206ENST00000426196 TMEM117Q9H0C3 514 aa16.26■□□□□ 0.19
HDAC6-206ENST00000426196 JPH1Q9HDC5 661 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-206ENST00000426196 DIAPH3Q9NSV4 1193 aa16.26■□□□□ 0.19
HDAC6-206ENST00000426196 TMEM161AQ9NX61 479 aa16.26■□□□□ 0.19
HDAC6-206ENST00000426196 DBR1Q9UK59 544 aaKnown RBP16.26■□□□□ 0.19
HDAC6-206ENST00000426196 USTQ9Y2C2 406 aa16.26■□□□□ 0.19
HDAC6-206ENST00000426196 NOC2LQ9Y3T9 749 aaKnown RBP16.26■□□□□ 0.19
HDAC6-206ENST00000426196 DENND4AQ7Z401 1863 aa16.26■□□□□ 0.19
HDAC6-206ENST00000426196 CACNA1GO43497 2377 aa16.26■□□□□ 0.19
HDAC6-206ENST00000426196 ERICH2A1L162 156 aa16.25■□□□□ 0.19
HDAC6-206ENST00000426196 GPR182O15218 404 aa16.25■□□□□ 0.19
HDAC6-206ENST00000426196 HOXA2O43364 376 aa16.25■□□□□ 0.19
HDAC6-206ENST00000426196 PUM1Q14671 1186 aaKnown RBP eCLIP16.25■□□□□ 0.19
HDAC6-206ENST00000426196 BMS1Q14692 1282 aaKnown RBP16.25■□□□□ 0.19
HDAC6-206ENST00000426196 PLCB4Q15147 1175 aa16.25■□□□□ 0.19
HDAC6-206ENST00000426196 ATAT1Q5SQI0 421 aa16.25■□□□□ 0.19
HDAC6-206ENST00000426196 RARS2Q5T160 578 aaKnown RBP16.25■□□□□ 0.19
HDAC6-206ENST00000426196 KIAA1841Q6NSI8 718 aa16.25■□□□□ 0.19
HDAC6-206ENST00000426196 CWC27Q6UX04 472 aaKnown RBP16.25■□□□□ 0.19
HDAC6-206ENST00000426196 LRRC43Q8N309 656 aa16.25■□□□□ 0.19
HDAC6-206ENST00000426196 DTWD2Q8NBA8 298 aa16.25■□□□□ 0.19
HDAC6-206ENST00000426196 PCYT2Q99447 389 aa16.25■□□□□ 0.19
HDAC6-206ENST00000426196 ELAC1Q9H777 363 aaKnown RBP16.25■□□□□ 0.19
HDAC6-206ENST00000426196 DZANK1Q9NVP4 752 aa16.25■□□□□ 0.19
HDAC6-206ENST00000426196 SPG21Q9NZD8 308 aa16.25■□□□□ 0.19
HDAC6-206ENST00000426196 ST3GAL5Q9UNP4 418 aa16.25■□□□□ 0.19
HDAC6-206ENST00000426196 KMT2BQ9UMN6 2715 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-206ENST00000426196 MEIS2O14770 477 aa16.24■□□□□ 0.19
HDAC6-206ENST00000426196 MAFGO15525 162 aa16.24■□□□□ 0.19
HDAC6-206ENST00000426196 WEE2P0C1S8 567 aa16.24■□□□□ 0.19
HDAC6-206ENST00000426196 ITGB5P18084 799 aa16.24■□□□□ 0.19
HDAC6-206ENST00000426196 CA8P35219 290 aa16.24■□□□□ 0.19
HDAC6-206ENST00000426196 TRDNQ13061 729 aa16.24■□□□□ 0.19
HDAC6-206ENST00000426196 MTHFD1LQ6UB35 978 aa16.24■□□□□ 0.19
HDAC6-206ENST00000426196 CYB5R4Q7L1T6 521 aa16.24■□□□□ 0.19
HDAC6-206ENST00000426196 KIAA2013Q8IYS2 634 aa16.24■□□□□ 0.19
HDAC6-206ENST00000426196 ABI1Q8IZP0 508 aa16.24■□□□□ 0.19
HDAC6-206ENST00000426196 MRPL43Q8N983 215 aaKnown RBP16.24■□□□□ 0.19
HDAC6-206ENST00000426196 TMEM87AQ8NBN3 555 aa16.24■□□□□ 0.19
HDAC6-206ENST00000426196 ACSF2Q96CM8 615 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-206ENST00000426196 HINFPQ9BQA5 517 aa16.24■□□□□ 0.19
HDAC6-206ENST00000426196 CYP26B1Q9NR63 512 aa16.24■□□□□ 0.19
HDAC6-206ENST00000426196 SLC9A2Q9UBY0 812 aa16.24■□□□□ 0.19
HDAC6-206ENST00000426196 FBXL21Q9UKT6 434 aa16.24■□□□□ 0.19
HDAC6-206ENST00000426196 FANCMQ8IYD8 2048 aa16.23■□□□□ 0.19
HDAC6-206ENST00000426196 C2orf71A6NGG8 1288 aa16.23■□□□□ 0.19
HDAC6-206ENST00000426196 IFIT3O14879 490 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms