RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 APBB2Q92870 758 aa20.17■□□□□ 0.82
IGHV3-47-201ENST00000425060 TMX3Q96JJ7 454 aa20.17■□□□□ 0.82
IGHV3-47-201ENST00000425060 IFIH1Q9BYX4 1025 aaKnown RBP20.17■□□□□ 0.82
IGHV3-47-201ENST00000425060 NRBP2Q9NSY0 501 aa20.17■□□□□ 0.82
IGHV3-47-201ENST00000425060 CEP131Q9UPN4 1083 aa20.17■□□□□ 0.82
IGHV3-47-201ENST00000425060 MICAL3Q7RTP6 2002 aa20.17■□□□□ 0.82
IGHV3-47-201ENST00000425060 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.16■□□□□ 0.82
IGHV3-47-201ENST00000425060 GJB5O95377 273 aa20.16■□□□□ 0.82
IGHV3-47-201ENST00000425060 SPIRE1Q08AE8 756 aa20.16■□□□□ 0.82
IGHV3-47-201ENST00000425060 TARBP2Q15633 366 aaKnown RBP20.16■□□□□ 0.82
IGHV3-47-201ENST00000425060 MYLIPQ8WY64 445 aa20.16■□□□□ 0.82
IGHV3-47-201ENST00000425060 CEP89Q96ST8 783 aa20.16■□□□□ 0.82
IGHV3-47-201ENST00000425060 NIFKQ9BYG3 293 aaKnown RBP20.16■□□□□ 0.82
IGHV3-47-201ENST00000425060 CELF4Q9BZC1 486 aaKnown RBP20.16■□□□□ 0.82
IGHV3-47-201ENST00000425060 FOXP1Q9H334 677 aaPredicted RBP20.16■□□□□ 0.82
IGHV3-47-201ENST00000425060 AGO3Q9H9G7 860 aaKnown RBP20.16■□□□□ 0.82
IGHV3-47-201ENST00000425060 SLC28A3Q9HAS3 691 aa20.16■□□□□ 0.82
IGHV3-47-201ENST00000425060 TRPV2Q9Y5S1 764 aa20.16■□□□□ 0.82
IGHV3-47-201ENST00000425060 CDH23Q9H251 3354 aa20.15■□□□□ 0.82
IGHV3-47-201ENST00000425060 KIF28PB7ZC32 967 aa20.15■□□□□ 0.82
IGHV3-47-201ENST00000425060 ARHGEF15O94989 841 aa20.15■□□□□ 0.82
IGHV3-47-201ENST00000425060 CA3P07451 260 aa20.15■□□□□ 0.82
IGHV3-47-201ENST00000425060 TMEM62Q0P6H9 643 aa20.15■□□□□ 0.82
IGHV3-47-201ENST00000425060 SAFBQ15424 915 aaKnown RBP eCLIP20.15■□□□□ 0.82
IGHV3-47-201ENST00000425060 TSHZ1Q6ZSZ6 1077 aa20.15■□□□□ 0.82
IGHV3-47-201ENST00000425060 EVPLQ92817 2033 aa20.15■□□□□ 0.82
IGHV3-47-201ENST00000425060 COL6A3P12111 3177 aa20.14■□□□□ 0.82
IGHV3-47-201ENST00000425060 MAGEB2O15479 319 aa20.14■□□□□ 0.81
IGHV3-47-201ENST00000425060 MCM2P49736 904 aa20.14■□□□□ 0.81
IGHV3-47-201ENST00000425060 XKR3Q5GH77 459 aa20.14■□□□□ 0.81
IGHV3-47-201ENST00000425060 SLFN12Q8IYM2 578 aa20.14■□□□□ 0.81
IGHV3-47-201ENST00000425060 USP38Q8NB14 1042 aa20.14■□□□□ 0.81
IGHV3-47-201ENST00000425060 FAM184AQ8NB25 1140 aa20.14■□□□□ 0.81
IGHV3-47-201ENST00000425060 BANK1Q8NDB2 785 aa20.14■□□□□ 0.81
IGHV3-47-201ENST00000425060 MTMR9Q96QG7 549 aa20.14■□□□□ 0.81
IGHV3-47-201ENST00000425060 CDHR5Q9HBB8 845 aa20.14■□□□□ 0.81
IGHV3-47-201ENST00000425060 GTF3C3Q9Y5Q9 886 aa20.14■□□□□ 0.81
IGHV3-47-201ENST00000425060 TLL1O43897 1013 aa20.13■□□□□ 0.81
IGHV3-47-201ENST00000425060 BAG4O95429 457 aaKnown RBP20.13■□□□□ 0.81
IGHV3-47-201ENST00000425060 AMHP03971 560 aa20.13■□□□□ 0.81
IGHV3-47-201ENST00000425060 PSMC5P62195 406 aa20.13■□□□□ 0.81
IGHV3-47-201ENST00000425060 TAP1Q03518 808 aa20.13■□□□□ 0.81
IGHV3-47-201ENST00000425060 EPHA7Q15375 998 aa20.13■□□□□ 0.81
IGHV3-47-201ENST00000425060 PPP2R2DQ66LE6 453 aa20.13■□□□□ 0.81
IGHV3-47-201ENST00000425060 TOP1MTQ969P6 601 aa20.13■□□□□ 0.81
IGHV3-47-201ENST00000425060 RAD9AQ99638 391 aa20.13■□□□□ 0.81
IGHV3-47-201ENST00000425060 CHD7Q9P2D1 2997 aa20.13■□□□□ 0.81
IGHV3-47-201ENST00000425060 LCHNA4D1U4 455 aa20.12■□□□□ 0.81
IGHV3-47-201ENST00000425060 M0QZ92 97 aa20.12■□□□□ 0.81
IGHV3-47-201ENST00000425060 ENPP3O14638 875 aa20.12■□□□□ 0.81
IGHV3-47-201ENST00000425060 P4HBP07237 508 aaKnown RBP20.12■□□□□ 0.81
IGHV3-47-201ENST00000425060 CD52P31358 61 aa20.12■□□□□ 0.81
IGHV3-47-201ENST00000425060 HTRA4P83105 476 aaPredicted RBP20.12■□□□□ 0.81
IGHV3-47-201ENST00000425060 EFCAB12Q6NXP0 572 aa20.12■□□□□ 0.81
IGHV3-47-201ENST00000425060 ANO5Q75V66 913 aa20.12■□□□□ 0.81
IGHV3-47-201ENST00000425060 MYOCDQ8IZQ8 938 aa20.12■□□□□ 0.81
IGHV3-47-201ENST00000425060 PRDM12Q9H4Q4 367 aa20.12■□□□□ 0.81
IGHV3-47-201ENST00000425060 WRAP73Q9P2S5 460 aaPredicted RBP20.12■□□□□ 0.81
IGHV3-47-201ENST00000425060 MYO9BQ13459 2157 aa20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 IGKV6-21A0A0C4DH24 114 aa20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 TMEM150BA6NC51 233 aa20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 MARCH6O60337 910 aa20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 NEMFO60524 1076 aa20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 GPR32O75388 356 aa20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 U2AF2P26368 475 aaKnown RBP eCLIP20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 QARSP47897 775 aaKnown RBP20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 CLCN3P51790 818 aa20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 CALCRLQ16602 461 aa20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 RTN4RL1Q86UN2 441 aaPredicted RBP20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 METTL13Q8N6R0 699 aa20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 TMEM40Q8WWA1 233 aa20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 LINC01599Q8WXQ3 324 aa20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 ZBED2Q9BTP6 218 aa20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 TMEM60Q9H2L4 133 aa20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 PADI3Q9ULW8 664 aa20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 LOXHD1Q8IVV2 1947 aa20.11■□□□□ 0.81
IGHV3-47-201ENST00000425060 VTNP04004 478 aa20.1■□□□□ 0.81
IGHV3-47-201ENST00000425060 ADGRE1Q14246 886 aa20.1■□□□□ 0.81
IGHV3-47-201ENST00000425060 FAM117BQ6P1L5 589 aa20.1■□□□□ 0.81
IGHV3-47-201ENST00000425060 SPRED2Q7Z698 418 aa20.1■□□□□ 0.81
IGHV3-47-201ENST00000425060 NOSTRINQ8IVI9 506 aa20.1■□□□□ 0.81
IGHV3-47-201ENST00000425060 LRRC71Q8N4P6 559 aa20.1■□□□□ 0.81
IGHV3-47-201ENST00000425060 TTC12Q9H892 705 aaPredicted RBP20.1■□□□□ 0.81
IGHV3-47-201ENST00000425060 RGL1Q9NZL6 768 aa20.1■□□□□ 0.81
IGHV3-47-201ENST00000425060 SEPT9Q9UHD8 586 aaPredicted RBP20.1■□□□□ 0.81
IGHV3-47-201ENST00000425060 PCDHA12Q9UN75 941 aa20.1■□□□□ 0.81
IGHV3-47-201ENST00000425060 NOC2LQ9Y3T9 749 aaKnown RBP20.1■□□□□ 0.81
IGHV3-47-201ENST00000425060 DDX11L8A8MPP1 907 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 SLITRK3O94933 977 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 FOSL2P15408 326 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 ATP2B1P20020 1258 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 TMOD1P28289 359 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 CRYBB1P53674 252 aaPredicted RBP20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 TBC1D8BQ0IIM8 1120 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 ORC2Q13416 577 aaPredicted RBP20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 MTERF2Q49AM1 385 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 NCAPH2Q6IBW4 605 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 C4orf19Q8IY42 314 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 CRIPAKQ8N1N5 446 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 SP7Q8TDD2 431 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms