RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 KCNA10Q16322 511 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 RINT1Q6NUQ1 792 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 PADI6Q6TGC4 694 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 SH3RF1Q7Z6J0 888 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 LRRC71Q8N4P6 559 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 REEP2Q9BRK0 252 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 TRIM9Q9C026 710 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 EYA4O95677 639 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 CCL5P13501 91 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 KIAA0753Q2KHM9 967 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 C4orf19Q8IY42 314 aa14.97□□□□□ -0.01
PRPF39-202ENST00000424478 EMID1Q96A84 441 aaPredicted RBP14.97□□□□□ -0.01
PRPF39-202ENST00000424478 PPFIA4O75335 1185 aa14.96□□□□□ -0.01
PRPF39-202ENST00000424478 FAM160B1Q5W0V3 765 aa14.96□□□□□ -0.01
PRPF39-202ENST00000424478 TRMT44Q8IYL2 757 aaKnown RBP14.96□□□□□ -0.01
PRPF39-202ENST00000424478 SYT2Q8N9I0 419 aaPredicted RBP14.96□□□□□ -0.01
PRPF39-202ENST00000424478 SETD4Q9NVD3 440 aa14.96□□□□□ -0.01
PRPF39-202ENST00000424478 STK17AQ9UEE5 414 aa14.96□□□□□ -0.01
PRPF39-202ENST00000424478 NKRFO15226 690 aaKnown RBP eCLIP14.96□□□□□ -0.01
PRPF39-202ENST00000424478 LGR5O75473 907 aa14.96□□□□□ -0.01
PRPF39-202ENST00000424478 ASGR1P07306 291 aa14.96□□□□□ -0.01
PRPF39-202ENST00000424478 PTMSP20962 102 aa14.96□□□□□ -0.01
PRPF39-202ENST00000424478 BMP6P22004 513 aa14.96□□□□□ -0.01
PRPF39-202ENST00000424478 DPYDQ12882 1025 aa14.96□□□□□ -0.01
PRPF39-202ENST00000424478 TMEM143Q96AN5 459 aa14.96□□□□□ -0.01
PRPF39-202ENST00000424478 SUGCTQ9HAC7 445 aa14.96□□□□□ -0.01
PRPF39-202ENST00000424478 CYP26B1Q9NR63 512 aa14.96□□□□□ -0.01
PRPF39-202ENST00000424478 ZBTB42B2RXF5 422 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 INSRRP14616 1297 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 RDM1Q8NG50 284 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 IKZF4Q9H2S9 585 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 SMARCAD1Q9H4L7 1026 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 KIAA1468Q9P260 1216 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 ARID2Q68CP9 1835 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 GJA9P57773 515 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 PURAQ00577 322 aaKnown RBP14.95□□□□□ -0.02
PRPF39-202ENST00000424478 KAT6AQ92794 2004 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 VTI1AQ96AJ9 217 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 DNAJC19Q96DA6 116 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 TIGD1Q96MW7 591 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 KIFC3Q9BVG8 833 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 ERAP1Q9NZ08 941 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 GDAQ9Y2T3 454 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 EMSYQ7Z589 1322 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 CPT1AP50416 773 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 PRMT2P55345 433 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 LRRC41Q15345 812 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 XKR3Q5GH77 459 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 KSR1Q8IVT5 923 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 NEK9Q8TD19 979 aa14.95□□□□□ -0.02
PRPF39-202ENST00000424478 GIT2Q14161 759 aa14.94□□□□□ -0.02
PRPF39-202ENST00000424478 KMT5BQ4FZB7 885 aa14.94□□□□□ -0.02
PRPF39-202ENST00000424478 FAM47CQ5HY64 1035 aa14.94□□□□□ -0.02
PRPF39-202ENST00000424478 FAM102BQ5T8I3 360 aa14.94□□□□□ -0.02
PRPF39-202ENST00000424478 C1orf186Q6ZWK4 172 aa14.94□□□□□ -0.02
PRPF39-202ENST00000424478 AFAP1L1Q8TED9 768 aa14.94□□□□□ -0.02
PRPF39-202ENST00000424478 MAN1B1Q9UKM7 699 aa14.94□□□□□ -0.02
PRPF39-202ENST00000424478 KLRC4O43908 158 aa14.94□□□□□ -0.02
PRPF39-202ENST00000424478 RPN1P04843 607 aaKnown RBP14.94□□□□□ -0.02
PRPF39-202ENST00000424478 DPCR1Q3MIW9 517 aa14.94□□□□□ -0.02
PRPF39-202ENST00000424478 DAW1Q8N136 415 aa14.94□□□□□ -0.02
PRPF39-202ENST00000424478 METTL13Q8N6R0 699 aa14.94□□□□□ -0.02
PRPF39-202ENST00000424478 ATP8B4Q8TF62 1192 aa14.94□□□□□ -0.02
PRPF39-202ENST00000424478 SMARCE1Q969G3 411 aa14.94□□□□□ -0.02
PRPF39-202ENST00000424478 XPNPEP1Q9NQW7 623 aa14.94□□□□□ -0.02
PRPF39-202ENST00000424478 USP20Q9Y2K6 914 aa14.94□□□□□ -0.02
PRPF39-202ENST00000424478 GTPBP6O43824 516 aaPredicted RBP14.93□□□□□ -0.02
PRPF39-202ENST00000424478 HIP1RO75146 1068 aa14.93□□□□□ -0.02
PRPF39-202ENST00000424478 CLCN3P51790 818 aa14.93□□□□□ -0.02
PRPF39-202ENST00000424478 TMEM62Q0P6H9 643 aa14.93□□□□□ -0.02
PRPF39-202ENST00000424478 MFSD10Q14728 455 aa14.93□□□□□ -0.02
PRPF39-202ENST00000424478 FBXO46Q6PJ61 603 aaPredicted RBP14.93□□□□□ -0.02
PRPF39-202ENST00000424478 SYAP1Q96A49 352 aaPredicted RBP14.93□□□□□ -0.02
PRPF39-202ENST00000424478 SLC39A2Q9NP94 309 aa14.93□□□□□ -0.02
PRPF39-202ENST00000424478 MYH11P35749 1972 aa14.93□□□□□ -0.02
PRPF39-202ENST00000424478 FRMPD3Q5JV73 1810 aa14.93□□□□□ -0.02
PRPF39-202ENST00000424478 POLGP54098 1239 aaPredicted RBP14.93□□□□□ -0.02
PRPF39-202ENST00000424478 PLPPR4Q7Z2D5 763 aa14.93□□□□□ -0.02
PRPF39-202ENST00000424478 SPC25Q9HBM1 224 aa14.93□□□□□ -0.02
PRPF39-202ENST00000424478 NRBP1Q9UHY1 535 aa14.93□□□□□ -0.02
PRPF39-202ENST00000424478 F2P00734 622 aa14.93□□□□□ -0.02
PRPF39-202ENST00000424478 GAS2L3Q86XJ1 694 aa14.93□□□□□ -0.02
PRPF39-202ENST00000424478 CEP89Q96ST8 783 aa14.93□□□□□ -0.02
PRPF39-202ENST00000424478 HDAC6Q9UBN7 1215 aa14.93□□□□□ -0.02
PRPF39-202ENST00000424478 LYPLA2O95372 231 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 SMIM10L2AP0DMW4 78 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 SMIM10L2BP0DMW5 78 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 PSEN2P49810 448 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 CASP5P51878 434 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 STK4Q13043 487 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 PPFIA1Q13136 1202 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 NBPF20Q3BBV1 942 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 C11orf57Q6ZUT1 292 aaPredicted RBP14.92□□□□□ -0.02
PRPF39-202ENST00000424478 SFR1Q86XK3 245 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 RNF214Q8ND24 703 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 BSNDQ8WZ55 320 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 EEF2KMTQ96G04 330 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 DNAJC25Q9H1X3 360 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 PANK4Q9NVE7 773 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 CSDE1O75534 798 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms