RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 VN1R2Q8NFZ6 395 aa17.8■□□□□ 0.44
RPUSD3-204ENST00000424438 KCNH7Q9NS40 1196 aa17.8■□□□□ 0.44
RPUSD3-204ENST00000424438 GVINP1Q7Z2Y8 2422 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 IGHDP01880 384 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 CALM1P0DP23 149 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 CALM2P0DP24 149 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 CALM3P0DP25 149 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 LAG3P18627 525 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 ACTR2P61160 394 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 FAM189BP81408 668 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 PTH1RQ03431 593 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 MTHFD1LQ6UB35 978 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 SRBD1Q8N5C6 995 aaKnown RBP17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 COLGALT1Q8NBJ5 622 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 TMEM87BQ96K49 555 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 MXRA8Q9BRK3 442 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 NGRNQ9NPE2 291 aaKnown RBP17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 TMEM161AQ9NX61 479 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 PCDHA6Q9UN73 950 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 PCDHA8Q9Y5H6 950 aa17.79■□□□□ 0.44
RPUSD3-204ENST00000424438 GPR182O15218 404 aa17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 HBP1O60381 514 aa17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 NBL1P41271 181 aa17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 LIFRP42702 1097 aa17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 TTC22Q5TAA0 569 aa17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 ANKRD54Q6NXT1 300 aa17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 UBALD2Q8IYN6 164 aa17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 ZNF710Q8N1W2 664 aa17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 MICAL1Q8TDZ2 1067 aa17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 PIBF1Q8WXW3 757 aa17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 MAP4K1Q92918 833 aa17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 NKD2Q969F2 451 aaPredicted RBP17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 SDF4Q9BRK5 362 aa17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 TAF6LQ9Y6J9 622 aa17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 MYH9P35579 1960 aaKnown RBP17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 CACNA1BQ00975 2339 aa17.78■□□□□ 0.44
RPUSD3-204ENST00000424438 HOXA2O43364 376 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 MGEA5O60502 916 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 RPS6KA5O75582 802 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 FOSP01100 380 aaPredicted RBP17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 CHMLP26374 656 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 PPM1AP35813 382 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 GATMP50440 423 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 ERVFC1P60507 584 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 MCTP2Q6DN12 878 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 SYCE2Q6PIF2 218 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 CASC1Q6TDU7 716 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 NIPA1Q7RTP0 329 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 KIAA0319LQ8IZA0 1049 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 MRPS27Q92552 414 aaKnown RBP17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 RIPOR3Q96MK2 946 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 NECTIN4Q96NY8 510 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 ADAM2Q99965 735 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 CWH43Q9H720 699 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 PUF60Q9UHX1 559 aaKnown RBP17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 NR2E1Q9Y466 385 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 PCDHGC5Q9Y5F6 944 aa17.77■□□□□ 0.44
RPUSD3-204ENST00000424438 DENND3A2RUS2 1198 aa17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 TBKBP1A7MCY6 615 aa17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 SGSM2O43147 1006 aa17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 PLEKHA8P1O95397 391 aa17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 GSPT1P15170 499 aaKnown RBP17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 TMEM62Q0P6H9 643 aa17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 NFX1Q12986 1120 aaKnown RBP17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 CEP55Q53EZ4 464 aa17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 ZNF484Q5JVG2 852 aa17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 THNSL1Q8IYQ7 743 aa17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 TRAPPC12Q8WVT3 735 aa17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 ZBTB10Q96DT7 871 aa17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 TMEM117Q9H0C3 514 aa17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 TYW1Q9NV66 732 aaKnown RBP17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 TMEM260Q9NX78 707 aa17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 NOC2LQ9Y3T9 749 aaKnown RBP17.76■□□□□ 0.43
RPUSD3-204ENST00000424438 MYO15AQ9UKN7 3530 aa17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 MEIS1O00470 390 aa17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 PER2O15055 1255 aa17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 KLRC1P26715 233 aa17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 CRYBB1P53674 252 aaPredicted RBP17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 ITIH3Q06033 890 aa17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 DSC3Q14574 896 aa17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 UBE2SQ16763 222 aa17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 TPRNQ4KMQ1 711 aa17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 SPOUT1Q5T280 376 aaKnown RBP17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 PPP1R18Q6NYC8 613 aa17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 RSPH1Q8WYR4 309 aa17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 MYL10Q9BUA6 226 aa17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 ATP6V0A4Q9HBG4 840 aa17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 ST3GAL5Q9UNP4 418 aa17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 SORCS3Q9UPU3 1222 aa17.75■□□□□ 0.43
RPUSD3-204ENST00000424438 CARNS1A5YM72 827 aa17.74■□□□□ 0.43
RPUSD3-204ENST00000424438 hCG_1984214I3L0E3 225 aa17.74■□□□□ 0.43
RPUSD3-204ENST00000424438 SH2B2O14492 632 aaPredicted RBP17.74■□□□□ 0.43
RPUSD3-204ENST00000424438 PPFIA3O75145 1194 aa17.74■□□□□ 0.43
RPUSD3-204ENST00000424438 MCM5P33992 734 aa17.74■□□□□ 0.43
RPUSD3-204ENST00000424438 ITGB3BPQ13352 177 aaPredicted RBP17.74■□□□□ 0.43
RPUSD3-204ENST00000424438 TMEM266Q2M3C6 531 aa17.74■□□□□ 0.43
RPUSD3-204ENST00000424438 FAM102BQ5T8I3 360 aa17.74■□□□□ 0.43
RPUSD3-204ENST00000424438 FAM160B1Q5W0V3 765 aa17.74■□□□□ 0.43
RPUSD3-204ENST00000424438 ABHD15Q6UXT9 468 aa17.74■□□□□ 0.43
RPUSD3-204ENST00000424438 TMTC3Q6ZXV5 915 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms