RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TMX3Q96JJ7 454 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 PBX4Q9BYU1 374 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 FOXP1Q9H334 677 aaPredicted RBP12.32□□□□□ -0.44
USP49-204ENST00000423567 KCNMB3Q9NPA1 279 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 IGSF9BQ9UPX0 1349 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 SMIM35A0A1B0GVV1 85 aa12.31□□□□□ -0.44
USP49-204ENST00000423567 FAM205CA6NFA0 338 aa12.31□□□□□ -0.44
USP49-204ENST00000423567 GRXCR1A8MXD5 290 aa12.31□□□□□ -0.44
USP49-204ENST00000423567 DKC1O60832 514 aaKnown RBP eCLIP12.31□□□□□ -0.44
USP49-204ENST00000423567 OATP04181 439 aa12.31□□□□□ -0.44
USP49-204ENST00000423567 ATP2B1P20020 1258 aa12.31□□□□□ -0.44
USP49-204ENST00000423567 KLRC1P26715 233 aa12.31□□□□□ -0.44
USP49-204ENST00000423567 MRPS6P82932 125 aaKnown RBP12.31□□□□□ -0.44
USP49-204ENST00000423567 PRKCEQ02156 737 aa12.31□□□□□ -0.44
USP49-204ENST00000423567 MBTPS1Q14703 1052 aa12.31□□□□□ -0.44
USP49-204ENST00000423567 GPNMBQ14956 572 aa12.31□□□□□ -0.44
USP49-204ENST00000423567 CALCRLQ16602 461 aa12.31□□□□□ -0.44
USP49-204ENST00000423567 FAM26DQ5JW98 314 aa12.31□□□□□ -0.44
USP49-204ENST00000423567 Q7L0L9 218 aa12.31□□□□□ -0.44
USP49-204ENST00000423567 NME8Q8N427 588 aa12.31□□□□□ -0.44
USP49-204ENST00000423567 DBF4BQ8NFT6 615 aa12.31□□□□□ -0.44
USP49-204ENST00000423567 APBB2Q92870 758 aa12.31□□□□□ -0.44
USP49-204ENST00000423567 NOL7Q9UMY1 257 aaKnown RBP12.31□□□□□ -0.44
USP49-204ENST00000423567 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.31□□□□□ -0.44
USP49-204ENST00000423567 TANC1Q9C0D5 1861 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 MAGEB2O15479 319 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 NEMFO60524 1076 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 AMHP03971 560 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 ATP4AP20648 1035 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 TMOD1P28289 359 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 WDR5P61964 334 aaKnown RBP12.3□□□□□ -0.44
USP49-204ENST00000423567 PSMC5P62195 406 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 PPP2R5CQ13362 524 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 PLEKHG4Q58EX7 1191 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 XKR3Q5GH77 459 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 METTL13Q8N6R0 699 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 FAM161BQ96MY7 647 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 MAP7D2Q96T17 732 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 ZBED2Q9BTP6 218 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 IFIH1Q9BYX4 1025 aaKnown RBP12.3□□□□□ -0.44
USP49-204ENST00000423567 SEMA6BQ9H3T3 888 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 SLC28A3Q9HAS3 691 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 SEPT9Q9UHD8 586 aaPredicted RBP12.3□□□□□ -0.44
USP49-204ENST00000423567 SMC3Q9UQE7 1217 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 PCDHA11Q9Y5I1 949 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 TRPV2Q9Y5S1 764 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 CDY2AQ9Y6F7 541 aa12.3□□□□□ -0.44
USP49-204ENST00000423567 H3BQV1 296 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 CD2BP2O95400 341 aaKnown RBP12.29□□□□□ -0.44
USP49-204ENST00000423567 C22orf31O95567 290 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 CHRNA1P02708 482 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 GHRP10912 638 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 PBX2P40425 430 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 TBC1D8BQ0IIM8 1120 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 TMEM62Q0P6H9 643 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 ORC2Q13416 577 aaPredicted RBP12.29□□□□□ -0.44
USP49-204ENST00000423567 NCAPH2Q6IBW4 605 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 B3GNT9Q6UX72 402 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 NOSTRINQ8IVI9 506 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 HERC6Q8IVU3 1022 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 USP38Q8NB14 1042 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 BANK1Q8NDB2 785 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 HAS1Q92839 578 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 ZBTB10Q96DT7 871 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 MTMR10Q9NXD2 777 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 VAV3Q9UKW4 847 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 SQORQ9Y6N5 450 aa12.29□□□□□ -0.44
USP49-204ENST00000423567 DDX11L8A8MPP1 907 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 TLL1O43897 1013 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 ZNF862O60290 1169 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 P4HBP07237 508 aaKnown RBP12.28□□□□□ -0.44
USP49-204ENST00000423567 GJB2P29033 226 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 MCM7P33993 719 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 TXKP42681 527 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 QARSP47897 775 aaKnown RBP12.28□□□□□ -0.44
USP49-204ENST00000423567 TRAPPC10P48553 1259 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 RABGGTBP53611 331 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 MGAT3Q09327 533 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 EPHA7Q15375 998 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 UGCGQ16739 394 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 FBXO47Q5MNV8 452 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 ODR4Q5SWX8 454 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 PPP2R2DQ66LE6 453 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 MCTP1Q6DN14 999 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 TSHZ1Q6ZSZ6 1077 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 ZNF710Q8N1W2 664 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 CELF4Q9BZC1 486 aaKnown RBP12.28□□□□□ -0.44
USP49-204ENST00000423567 NKX2-4Q9H2Z4 354 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 ZNF576Q9H609 170 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 PCDHA12Q9UN75 941 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 GINS2Q9Y248 185 aa12.28□□□□□ -0.44
USP49-204ENST00000423567 ZBTB42B2RXF5 422 aa12.27□□□□□ -0.45
USP49-204ENST00000423567 EML1O00423 815 aa12.27□□□□□ -0.45
USP49-204ENST00000423567 PAK2Q13177 524 aa12.27□□□□□ -0.45
USP49-204ENST00000423567 LPIN1Q14693 890 aa12.27□□□□□ -0.45
USP49-204ENST00000423567 MTERF2Q49AM1 385 aa12.27□□□□□ -0.45
USP49-204ENST00000423567 TTC38Q5R3I4 469 aa12.27□□□□□ -0.45
USP49-204ENST00000423567 EFCAB12Q6NXP0 572 aa12.27□□□□□ -0.45
USP49-204ENST00000423567 OTUD6AQ7L8S5 288 aa12.27□□□□□ -0.45
USP49-204ENST00000423567 EXOC8Q8IYI6 725 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms