RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 A0A1W2PQ64 194 aa18.98■□□□□ 0.63
COL7A1-202ENST00000422991 A0A1W2PQD8 194 aa18.98■□□□□ 0.63
COL7A1-202ENST00000422991 PLCG1P19174 1290 aa18.98■□□□□ 0.63
COL7A1-202ENST00000422991 RTP1P59025 263 aa18.98■□□□□ 0.63
COL7A1-202ENST00000422991 ADAM17P78536 824 aa18.98■□□□□ 0.63
COL7A1-202ENST00000422991 TARBP2Q15633 366 aaKnown RBP18.98■□□□□ 0.63
COL7A1-202ENST00000422991 TRIM60Q495X7 471 aa18.98■□□□□ 0.63
COL7A1-202ENST00000422991 ANKRD33Q7Z3H0 272 aa18.98■□□□□ 0.63
COL7A1-202ENST00000422991 KCNK18Q7Z418 384 aa18.98■□□□□ 0.63
COL7A1-202ENST00000422991 KCTD17Q8N5Z5 321 aa18.98■□□□□ 0.63
COL7A1-202ENST00000422991 RASSF8Q8NHQ8 419 aa18.98■□□□□ 0.63
COL7A1-202ENST00000422991 TRAPPC12Q8WVT3 735 aa18.98■□□□□ 0.63
COL7A1-202ENST00000422991 CEP89Q96ST8 783 aa18.98■□□□□ 0.63
COL7A1-202ENST00000422991 DBR1Q9UK59 544 aaKnown RBP18.98■□□□□ 0.63
COL7A1-202ENST00000422991 A0A087WWV3 80 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 A0A087X0B3 334 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 MBLAC1A4D2B0 266 aaPredicted RBP18.97■□□□□ 0.63
COL7A1-202ENST00000422991 RRN3P2A6NIE6 340 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 GNAT1P11488 350 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 XRCC6P12956 609 aaKnown RBP eCLIP18.97■□□□□ 0.63
COL7A1-202ENST00000422991 CMA1P23946 247 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 NPEPPSP55786 919 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 IGBP1P78318 339 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 MTERF2Q49AM1 385 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 MARCH8Q5T0T0 291 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 OTUD6AQ7L8S5 288 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 FAM126BQ8IXS8 530 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 LRRC15Q8TF66 581 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 CTAGE1Q96RT6 745 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 PLIN2Q99541 437 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 CYP26B1Q9NR63 512 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 CCDC39Q9UFE4 941 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 TUBE1Q9UJT0 475 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 PPME1Q9Y570 386 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 NR2E3Q9Y5X4 410 aa18.97■□□□□ 0.63
COL7A1-202ENST00000422991 CEP290O15078 2479 aa18.96■□□□□ 0.63
COL7A1-202ENST00000422991 E9PMD0 336 aa18.96■□□□□ 0.63
COL7A1-202ENST00000422991 H0YGN5 161 aa18.96■□□□□ 0.63
COL7A1-202ENST00000422991 B4GALT4O60513 344 aa18.96■□□□□ 0.63
COL7A1-202ENST00000422991 PQBP1O60828 265 aaKnown RBP18.96■□□□□ 0.63
COL7A1-202ENST00000422991 C22orf31O95567 290 aa18.96■□□□□ 0.63
COL7A1-202ENST00000422991 RARRES1P49788 294 aa18.96■□□□□ 0.63
COL7A1-202ENST00000422991 ZNF200P98182 395 aaPredicted RBP18.96■□□□□ 0.63
COL7A1-202ENST00000422991 XKR9Q5GH70 373 aa18.96■□□□□ 0.63
COL7A1-202ENST00000422991 CEP170P1Q96L14 293 aa18.96■□□□□ 0.63
COL7A1-202ENST00000422991 TOX2Q96NM4 488 aa18.96■□□□□ 0.63
COL7A1-202ENST00000422991 SH2D3AQ9BRG2 576 aa18.96■□□□□ 0.63
COL7A1-202ENST00000422991 TRPV6Q9H1D0 765 aa18.96■□□□□ 0.63
COL7A1-202ENST00000422991 TRMT13Q9NUP7 481 aaKnown RBP18.96■□□□□ 0.63
COL7A1-202ENST00000422991 FAM13BQ9NYF5 915 aa18.96■□□□□ 0.63
COL7A1-202ENST00000422991 DNM3Q9UQ16 869 aa18.96■□□□□ 0.63
COL7A1-202ENST00000422991 ATP11BQ9Y2G3 1177 aa18.96■□□□□ 0.63
COL7A1-202ENST00000422991 EVPLQ92817 2033 aa18.95■□□□□ 0.62
COL7A1-202ENST00000422991 FAM237AA0A1B0GTK4 181 aa18.95■□□□□ 0.62
COL7A1-202ENST00000422991 TREHO43280 583 aa18.95■□□□□ 0.62
COL7A1-202ENST00000422991 EVI5O60447 810 aa18.95■□□□□ 0.62
COL7A1-202ENST00000422991 EYA4O95677 639 aa18.95■□□□□ 0.62
COL7A1-202ENST00000422991 CD4P01730 458 aa18.95■□□□□ 0.62
COL7A1-202ENST00000422991 PFKFB1P16118 471 aa18.95■□□□□ 0.62
COL7A1-202ENST00000422991 TLE2Q04725 743 aa18.95■□□□□ 0.62
COL7A1-202ENST00000422991 PTGISQ16647 500 aa18.95■□□□□ 0.62
COL7A1-202ENST00000422991 MTHFD1LQ6UB35 978 aa18.95■□□□□ 0.62
COL7A1-202ENST00000422991 MRPS27Q92552 414 aaKnown RBP18.95■□□□□ 0.62
COL7A1-202ENST00000422991 CCDC43Q96MW1 224 aaKnown RBP18.95■□□□□ 0.62
COL7A1-202ENST00000422991 GBP4Q96PP9 640 aa18.95■□□□□ 0.62
COL7A1-202ENST00000422991 BHMT2Q9H2M3 363 aa18.95■□□□□ 0.62
COL7A1-202ENST00000422991 BLOC1S4Q9NUP1 217 aa18.95■□□□□ 0.62
COL7A1-202ENST00000422991 STK17AQ9UEE5 414 aa18.95■□□□□ 0.62
COL7A1-202ENST00000422991 ARHGEF35A5YM69 484 aa18.94■□□□□ 0.62
COL7A1-202ENST00000422991 TLR3O15455 904 aaKnown RBP18.94■□□□□ 0.62
COL7A1-202ENST00000422991 TBC1D8BQ0IIM8 1120 aa18.94■□□□□ 0.62
COL7A1-202ENST00000422991 NAALADL2Q58DX5 795 aa18.94■□□□□ 0.62
COL7A1-202ENST00000422991 RRAGBQ5VZM2 374 aa18.94■□□□□ 0.62
COL7A1-202ENST00000422991 CCDC73Q6ZRK6 1079 aa18.94■□□□□ 0.62
COL7A1-202ENST00000422991 SERINC5Q86VE9 423 aa18.94■□□□□ 0.62
COL7A1-202ENST00000422991 PDILTQ8N807 584 aa18.94■□□□□ 0.62
COL7A1-202ENST00000422991 FSIP1Q8NA03 581 aa18.94■□□□□ 0.62
COL7A1-202ENST00000422991 RAD54LQ92698 747 aa18.94■□□□□ 0.62
COL7A1-202ENST00000422991 ZBTB10Q96DT7 871 aa18.94■□□□□ 0.62
COL7A1-202ENST00000422991 GOLPH3LQ9H4A5 285 aa18.94■□□□□ 0.62
COL7A1-202ENST00000422991 DHX33Q9H6R0 707 aaKnown RBP18.94■□□□□ 0.62
COL7A1-202ENST00000422991 HPSEQ9Y251 543 aa18.94■□□□□ 0.62
COL7A1-202ENST00000422991 TANC1Q9C0D5 1861 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 A0A1B0GVL5 298 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 GOLGA6L4A6NEF3 574 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 DCDC2CA8MYV0 355 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 MAGEB2O15479 319 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 MAFO75444 373 aaPredicted RBP18.93■□□□□ 0.62
COL7A1-202ENST00000422991 KLRC1P26715 233 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 RFC5P40937 340 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 STAT6P42226 847 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 PTK7Q13308 1070 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 E2F4Q16254 413 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 RUFY4Q6ZNE9 571 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 LINC01465Q8N7H1 131 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 PANK2Q9BZ23 570 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 KCNH3Q9ULD8 1083 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 NOD1Q9Y239 953 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 PCDHA2Q9Y5H9 948 aa18.93■□□□□ 0.62
COL7A1-202ENST00000422991 IGKV6-21A0A0C4DH24 114 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms