RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 RNF207Q6ZRF8 634 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 TMC7Q7Z402 723 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 FAM160B2Q86V87 743 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 NPAS4Q8IUM7 802 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 ST13P5Q8NFI4 369 aaPredicted RBP6.58□□□□□ -1.36
HDAC8-212ENST00000421523 PPTC7Q8NI37 304 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 CHURC1Q8WUH1 139 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 GATA6Q92908 595 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 MAP4K1Q92918 833 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 EVI5LQ96CN4 794 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 GPR20Q99678 358 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 NACAP1Q9BZK3 213 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 NAPBQ9H115 298 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 PLSCR2Q9NRY7 297 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 HELLSQ9NRZ9 838 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 TCP11L1Q9NUJ3 509 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 PRR12Q9ULL5 1215 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 MTMR7Q9Y216 660 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 ZNF462Q96JM2 2506 aa6.58□□□□□ -1.36
HDAC8-212ENST00000421523 RALGAPA1Q6GYQ0 2036 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 ZMYM6O95789 1325 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 A0A0D9SFI3 127 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 TBKBP1A7MCY6 615 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 CLASP2O75122 1294 aaKnown RBP6.57□□□□□ -1.36
HDAC8-212ENST00000421523 ICAM1P05362 532 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 RETP07949 1114 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 HSPD1P10809 573 aaKnown RBP6.57□□□□□ -1.36
HDAC8-212ENST00000421523 SRFP11831 508 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 EPCAMP16422 314 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 GBP2P32456 591 aaPredicted RBP6.57□□□□□ -1.36
HDAC8-212ENST00000421523 PBX3P40426 434 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 RPS6P62753 249 aaKnown RBP6.57□□□□□ -1.36
HDAC8-212ENST00000421523 UBXN2BQ14CS0 331 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 PTPN14Q15678 1187 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 CSRP2Q16527 193 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 LARP1BQ659C4 914 aaKnown RBP6.57□□□□□ -1.36
HDAC8-212ENST00000421523 TTBK2Q6IQ55 1244 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 COLGALT1Q8NBJ5 622 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 BORCS6Q96GS4 357 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 FAM227BQ96M60 508 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 RANBP17Q9H2T7 1088 aaKnown RBP6.57□□□□□ -1.36
HDAC8-212ENST00000421523 SETD4Q9NVD3 440 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 IGSF9Q9P2J2 1179 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 LRFN2Q9ULH4 789 aa6.57□□□□□ -1.36
HDAC8-212ENST00000421523 TSPY2A6NKD2 308 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 LRP3O75074 770 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 N4BP1O75113 896 aaKnown RBP6.56□□□□□ -1.36
HDAC8-212ENST00000421523 PRB1P04280 392 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 SLC3A2P08195 630 aaKnown RBP6.56□□□□□ -1.36
HDAC8-212ENST00000421523 STAG3L1P0CL83 205 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 SNHG28P0DPA3 235 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 HOXD8P13378 290 aaPredicted RBP6.56□□□□□ -1.36
HDAC8-212ENST00000421523 SCG2P13521 617 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 CD52P31358 61 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 NOVA1P51513 510 aaKnown RBP6.56□□□□□ -1.36
HDAC8-212ENST00000421523 ARHGAP4P98171 946 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 ZNF252P-AS1Q0IIN9 211 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 LAMC2Q13753 1193 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 NONOQ15233 471 aaKnown RBP eCLIP6.56□□□□□ -1.36
HDAC8-212ENST00000421523 SF3A2Q15428 464 aaKnown RBP6.56□□□□□ -1.36
HDAC8-212ENST00000421523 COL28A1Q2UY09 1125 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 MCMDC2Q4G0Z9 681 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 PPP4R3BQ5MIZ7 849 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 ANKRD45Q5TZF3 282 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.56□□□□□ -1.36
HDAC8-212ENST00000421523 ZNF589Q86UQ0 364 aaPredicted RBP6.56□□□□□ -1.36
HDAC8-212ENST00000421523 SMC5Q8IY18 1101 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 SLC44A3Q8N4M1 653 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 CLEC4DQ8WXI8 215 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 MRPS27Q92552 414 aaKnown RBP6.56□□□□□ -1.36
HDAC8-212ENST00000421523 EMID1Q96A84 441 aaPredicted RBP6.56□□□□□ -1.36
HDAC8-212ENST00000421523 SPATA33Q96N06 139 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 TMEM47Q9BQJ4 181 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 MYL10Q9BUA6 226 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 RNPEPQ9H4A4 650 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 OSBPL3Q9H4L5 887 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 NGRNQ9NPE2 291 aaKnown RBP6.56□□□□□ -1.36
HDAC8-212ENST00000421523 RXFP3Q9NSD7 469 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 DZANK1Q9NVP4 752 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 PUF60Q9UHX1 559 aaKnown RBP6.56□□□□□ -1.36
HDAC8-212ENST00000421523 STX8Q9UNK0 236 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 MTF2Q9Y483 593 aaPredicted RBP6.56□□□□□ -1.36
HDAC8-212ENST00000421523 MRVI1Q9Y6F6 885 aa6.56□□□□□ -1.36
HDAC8-212ENST00000421523 C2orf16Q68DN1 1984 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 ANKRD17O75179 2603 aaKnown RBP6.55□□□□□ -1.36
HDAC8-212ENST00000421523 SPTA1P02549 2419 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 KIAA1217Q5T5P2 1943 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 C2orf71A6NGG8 1288 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 B4DLN1 442 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 TM4SF5O14894 197 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 GIPC1O14908 333 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 SEC24BO95487 1268 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 IGHDP01880 384 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 PDHBP11177 359 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 HOXC8P31273 242 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 SLC16A2P36021 539 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 MRPL12P52815 198 aaKnown RBP6.55□□□□□ -1.36
HDAC8-212ENST00000421523 SNW1Q13573 536 aaKnown RBP6.55□□□□□ -1.36
HDAC8-212ENST00000421523 SMC1AQ14683 1233 aaKnown RBP6.55□□□□□ -1.36
HDAC8-212ENST00000421523 CCDC96Q2M329 555 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms