RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 STK24Q9Y6E0 443 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 TET1Q8NFU7 2136 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 LAMA3Q16787 3333 aa16.17■□□□□ 0.18
PTPN18-204ENST00000420717 SPATA31C1P0DKV0 1188 aa16.17■□□□□ 0.18
PTPN18-204ENST00000420717 RPA1P27694 616 aa16.17■□□□□ 0.18
PTPN18-204ENST00000420717 THPOP40225 353 aa16.17■□□□□ 0.18
PTPN18-204ENST00000420717 CCL23P55773 120 aa16.17■□□□□ 0.18
PTPN18-204ENST00000420717 BECN1Q14457 450 aa16.17■□□□□ 0.18
PTPN18-204ENST00000420717 TMEM240Q5SV17 173 aa16.17■□□□□ 0.18
PTPN18-204ENST00000420717 FAM43BQ6ZT52 329 aaPredicted RBP16.17■□□□□ 0.18
PTPN18-204ENST00000420717 RSPH3Q86UC2 560 aa16.17■□□□□ 0.18
PTPN18-204ENST00000420717 RPUSD2Q8IZ73 545 aaKnown RBP16.17■□□□□ 0.18
PTPN18-204ENST00000420717 SCLYQ96I15 445 aa16.17■□□□□ 0.18
PTPN18-204ENST00000420717 DYDC2Q96IM9 177 aa16.17■□□□□ 0.18
PTPN18-204ENST00000420717 SQORQ9Y6N5 450 aa16.17■□□□□ 0.18
PTPN18-204ENST00000420717 EVPLQ92817 2033 aa16.17■□□□□ 0.18
PTPN18-204ENST00000420717 RSPH10B2B2RC85 870 aa16.16■□□□□ 0.18
PTPN18-204ENST00000420717 NBNO60934 754 aa16.16■□□□□ 0.18
PTPN18-204ENST00000420717 RSPH10BP0C881 870 aa16.16■□□□□ 0.18
PTPN18-204ENST00000420717 XRCC6P12956 609 aaKnown RBP eCLIP16.16■□□□□ 0.18
PTPN18-204ENST00000420717 KLRC1P26715 233 aa16.16■□□□□ 0.18
PTPN18-204ENST00000420717 YWHABP31946 246 aaKnown RBP16.16■□□□□ 0.18
PTPN18-204ENST00000420717 TECP42680 631 aa16.16■□□□□ 0.18
PTPN18-204ENST00000420717 IGBP1P78318 339 aa16.16■□□□□ 0.18
PTPN18-204ENST00000420717 MKRN4PQ13434 485 aaPredicted RBP16.16■□□□□ 0.18
PTPN18-204ENST00000420717 IL17AQ16552 155 aa16.16■□□□□ 0.18
PTPN18-204ENST00000420717 LRIT3Q3SXY7 679 aa16.16■□□□□ 0.18
PTPN18-204ENST00000420717 HAUS3Q68CZ6 603 aa16.16■□□□□ 0.18
PTPN18-204ENST00000420717 ERMNQ8TAM6 284 aa16.16■□□□□ 0.18
PTPN18-204ENST00000420717 HERVK_113Q902F9 699 aa16.16■□□□□ 0.18
PTPN18-204ENST00000420717 ANKEF1Q9NU02 776 aa16.16■□□□□ 0.18
PTPN18-204ENST00000420717 RGL1Q9NZL6 768 aa16.16■□□□□ 0.18
PTPN18-204ENST00000420717 SEPT9Q9UHD8 586 aaPredicted RBP16.16■□□□□ 0.18
PTPN18-204ENST00000420717 MICAL3Q7RTP6 2002 aa16.16■□□□□ 0.18
PTPN18-204ENST00000420717 SLC26A4O43511 780 aa16.15■□□□□ 0.18
PTPN18-204ENST00000420717 MAFO75444 373 aaPredicted RBP16.15■□□□□ 0.18
PTPN18-204ENST00000420717 ZSCAN22P10073 491 aaPredicted RBP16.15■□□□□ 0.18
PTPN18-204ENST00000420717 MRPS6P82932 125 aaKnown RBP16.15■□□□□ 0.18
PTPN18-204ENST00000420717 CYP4A11Q02928 519 aa16.15■□□□□ 0.18
PTPN18-204ENST00000420717 PTPAQ15257 358 aa16.15■□□□□ 0.18
PTPN18-204ENST00000420717 DTHD1Q6ZMT9 781 aa16.15■□□□□ 0.18
PTPN18-204ENST00000420717 EXOC8Q8IYI6 725 aa16.15■□□□□ 0.18
PTPN18-204ENST00000420717 KIAA0319LQ8IZA0 1049 aa16.15■□□□□ 0.18
PTPN18-204ENST00000420717 KCTD17Q8N5Z5 321 aa16.15■□□□□ 0.18
PTPN18-204ENST00000420717 DNAJB3Q8WWF6 145 aa16.15■□□□□ 0.18
PTPN18-204ENST00000420717 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.15■□□□□ 0.182e-6■□□□□ 8.4
PTPN18-204ENST00000420717 DHX33Q9H6R0 707 aaKnown RBP16.15■□□□□ 0.18
PTPN18-204ENST00000420717 CYP26B1Q9NR63 512 aa16.15■□□□□ 0.18
PTPN18-204ENST00000420717 PTPRSQ13332 1948 aa16.14■□□□□ 0.17
PTPN18-204ENST00000420717 GAS2O43903 313 aaKnown RBP16.14■□□□□ 0.17
PTPN18-204ENST00000420717 MED24O75448 989 aa16.14■□□□□ 0.17
PTPN18-204ENST00000420717 BAIAP3O94812 1187 aa16.14■□□□□ 0.17
PTPN18-204ENST00000420717 CHRNA1P02708 482 aa16.14■□□□□ 0.17
PTPN18-204ENST00000420717 RFC5P40937 340 aa16.14■□□□□ 0.17
PTPN18-204ENST00000420717 NASPP49321 788 aaPredicted RBP16.14■□□□□ 0.17
PTPN18-204ENST00000420717 TBC1D8BQ0IIM8 1120 aa16.14■□□□□ 0.17
PTPN18-204ENST00000420717 CTTNQ14247 550 aaKnown RBP16.14■□□□□ 0.17
PTPN18-204ENST00000420717 SF3A1Q15459 793 aaKnown RBP16.14■□□□□ 0.17
PTPN18-204ENST00000420717 PLEKHG4Q58EX7 1191 aa16.14■□□□□ 0.17
PTPN18-204ENST00000420717 C9orf50Q5SZB4 431 aa16.14■□□□□ 0.17
PTPN18-204ENST00000420717 HYIQ5T013 277 aa16.14■□□□□ 0.17
PTPN18-204ENST00000420717 IER5Q5VY09 327 aa16.14■□□□□ 0.17
PTPN18-204ENST00000420717 OTUD6AQ7L8S5 288 aa16.14■□□□□ 0.17
PTPN18-204ENST00000420717 CATSPER3Q86XQ3 398 aa16.14■□□□□ 0.17
PTPN18-204ENST00000420717 ZBTB10Q96DT7 871 aa16.14■□□□□ 0.17
PTPN18-204ENST00000420717 AK8Q96MA6 479 aa16.14■□□□□ 0.17
PTPN18-204ENST00000420717 JPH2Q9BR39 696 aaPredicted RBP16.14■□□□□ 0.17
PTPN18-204ENST00000420717 LRWD1Q9UFC0 647 aa16.14■□□□□ 0.17
PTPN18-204ENST00000420717 DBR1Q9UK59 544 aaKnown RBP16.14■□□□□ 0.17
PTPN18-204ENST00000420717 TMEM150BA6NC51 233 aa16.13■□□□□ 0.17
PTPN18-204ENST00000420717 F13A1P00488 732 aa16.13■□□□□ 0.17
PTPN18-204ENST00000420717 SHHQ15465 462 aa16.13■□□□□ 0.17
PTPN18-204ENST00000420717 HABP4Q5JVS0 413 aaKnown RBP16.13■□□□□ 0.17
PTPN18-204ENST00000420717 PLA2G4FQ68DD2 849 aa16.13■□□□□ 0.17
PTPN18-204ENST00000420717 CNKSR3Q6P9H4 555 aa16.13■□□□□ 0.17
PTPN18-204ENST00000420717 ZNF365Q70YC5 407 aa16.13■□□□□ 0.17
PTPN18-204ENST00000420717 USP38Q8NB14 1042 aa16.13■□□□□ 0.17
PTPN18-204ENST00000420717 MMTAG2Q9BU76 263 aaKnown RBP16.13■□□□□ 0.17
PTPN18-204ENST00000420717 TRPV2Q9Y5S1 764 aa16.13■□□□□ 0.17
PTPN18-204ENST00000420717 COL4A6Q14031 1691 aa16.13■□□□□ 0.17
PTPN18-204ENST00000420717 DDX11L8A8MPP1 907 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 EFCAB14O75071 495 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 BRD1O95696 1058 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 CTSHP09668 335 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 ACRP10323 421 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 TMOD1P28289 359 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 DDIT3P35638 169 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 RARRES1P49788 294 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 MTERF2Q49AM1 385 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 FBXO47Q5MNV8 452 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 ATL3Q6DD88 541 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 TSHZ1Q6ZSZ6 1077 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 TPH2Q8IWU9 490 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 MAP7D2Q96T17 732 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 CELF4Q9BZC1 486 aaKnown RBP16.12■□□□□ 0.17
PTPN18-204ENST00000420717 FAM49AQ9H0Q0 323 aaPredicted RBP16.12■□□□□ 0.17
PTPN18-204ENST00000420717 MTIF3Q9H2K0 278 aaKnown RBP16.12■□□□□ 0.17
PTPN18-204ENST00000420717 CLIC4Q9Y696 253 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 CDY2AQ9Y6F7 541 aa16.12■□□□□ 0.17
PTPN18-204ENST00000420717 LAMA2P24043 3122 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms