RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 PLXNA4Q9HCM2 1894 aa16.29■□□□□ 0.2
NFE4-201ENST00000420058 ZBTB42B2RXF5 422 aa16.28■□□□□ 0.2
NFE4-201ENST00000420058 C9IYK1 514 aa16.28■□□□□ 0.2
NFE4-201ENST00000420058 CCNE2O96020 404 aa16.28■□□□□ 0.2
NFE4-201ENST00000420058 ATF7P17544 494 aaPredicted RBP16.28■□□□□ 0.2
NFE4-201ENST00000420058 ATP4AP20648 1035 aa16.28■□□□□ 0.2
NFE4-201ENST00000420058 LIFRP42702 1097 aa16.28■□□□□ 0.2
NFE4-201ENST00000420058 VCPP55072 806 aaKnown RBP16.28■□□□□ 0.2
NFE4-201ENST00000420058 UBE3AQ05086 875 aa16.28■□□□□ 0.2
NFE4-201ENST00000420058 PKN1Q16512 942 aa16.28■□□□□ 0.2
NFE4-201ENST00000420058 DUSP6Q16828 381 aa16.28■□□□□ 0.2
NFE4-201ENST00000420058 TMEM184AQ6ZMB5 413 aa16.28■□□□□ 0.2
NFE4-201ENST00000420058 TMTC3Q6ZXV5 915 aa16.28■□□□□ 0.2
NFE4-201ENST00000420058 RPGRIP1Q96KN7 1286 aa16.28■□□□□ 0.2
NFE4-201ENST00000420058 AZI2Q9H6S1 392 aa16.28■□□□□ 0.2
NFE4-201ENST00000420058 CWH43Q9H720 699 aa16.28■□□□□ 0.2
NFE4-201ENST00000420058 AGO4Q9HCK5 861 aaKnown RBP16.28■□□□□ 0.2
NFE4-201ENST00000420058 RGS18Q9NS28 235 aa16.28■□□□□ 0.2
NFE4-201ENST00000420058 TYW1Q9NV66 732 aaKnown RBP16.28■□□□□ 0.2
NFE4-201ENST00000420058 SPDYE3A6NKU9 549 aa16.27■□□□□ 0.2
NFE4-201ENST00000420058 MEIS1O00470 390 aa16.27■□□□□ 0.2
NFE4-201ENST00000420058 FGF18O76093 207 aa16.27■□□□□ 0.2
NFE4-201ENST00000420058 PTPN5P54829 565 aa16.27■□□□□ 0.2
NFE4-201ENST00000420058 SIGLEC14Q08ET2 396 aa16.27■□□□□ 0.2
NFE4-201ENST00000420058 NFX1Q12986 1120 aaKnown RBP16.27■□□□□ 0.2
NFE4-201ENST00000420058 SYCE2Q6PIF2 218 aa16.27■□□□□ 0.2
NFE4-201ENST00000420058 ABHD15Q6UXT9 468 aa16.27■□□□□ 0.2
NFE4-201ENST00000420058 TMTC2Q8N394 836 aa16.27■□□□□ 0.2
NFE4-201ENST00000420058 FANCBQ8NB91 859 aa16.27■□□□□ 0.2
NFE4-201ENST00000420058 MICAL1Q8TDZ2 1067 aa16.27■□□□□ 0.2
NFE4-201ENST00000420058 PGBD1Q96JS3 809 aa16.27■□□□□ 0.2
NFE4-201ENST00000420058 ADAM2Q99965 735 aa16.27■□□□□ 0.2
NFE4-201ENST00000420058 TLR9Q9NR96 1032 aa16.27■□□□□ 0.2
NFE4-201ENST00000420058 PCDHB7Q9Y5E2 793 aa16.27■□□□□ 0.2
NFE4-201ENST00000420058 FNDC1Q4ZHG4 1894 aaPredicted RBP16.27■□□□□ 0.19
NFE4-201ENST00000420058 TBKBP1A7MCY6 615 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 M0QZ92 97 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 DHX15O43143 795 aaKnown RBP16.26■□□□□ 0.19
NFE4-201ENST00000420058 MCM5P33992 734 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 FUT2Q10981 343 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 DSC3Q14574 896 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 CEP55Q53EZ4 464 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 WWC2Q6AWC2 1192 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 LRRC55Q6ZSA7 311 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 SLC24A5Q71RS6 500 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 COLGALT1Q8NBJ5 622 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 TMEM87BQ96K49 555 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 RNF19AQ9NV58 838 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 LRFN2Q9ULH4 789 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 ST3GAL5Q9UNP4 418 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 PCDHB12Q9Y5F1 795 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 FAM186AA6NE01 2351 aa16.26■□□□□ 0.19
NFE4-201ENST00000420058 MYO10Q9HD67 2058 aa16.25■□□□□ 0.19
NFE4-201ENST00000420058 RPS6KA5O75582 802 aa16.25■□□□□ 0.19
NFE4-201ENST00000420058 IBSPP21815 317 aaPredicted RBP16.25■□□□□ 0.19
NFE4-201ENST00000420058 AVPR2P30518 371 aa16.25■□□□□ 0.19
NFE4-201ENST00000420058 APOBRQ0VD83 1088 aa16.25■□□□□ 0.19
NFE4-201ENST00000420058 CASC1Q6TDU7 716 aa16.25■□□□□ 0.19
NFE4-201ENST00000420058 NFXL1Q6ZNB6 911 aa16.25■□□□□ 0.19
NFE4-201ENST00000420058 FAM43BQ6ZT52 329 aaPredicted RBP16.25■□□□□ 0.19
NFE4-201ENST00000420058 TNPO1Q92973 898 aaKnown RBP16.25■□□□□ 0.19
NFE4-201ENST00000420058 SNX27Q96L92 541 aa16.25■□□□□ 0.19
NFE4-201ENST00000420058 CDCA3Q99618 268 aaPredicted RBP16.25■□□□□ 0.19
NFE4-201ENST00000420058 PRRX2Q99811 253 aa16.25■□□□□ 0.19
NFE4-201ENST00000420058 SDF4Q9BRK5 362 aa16.25■□□□□ 0.19
NFE4-201ENST00000420058 LRRC2Q9BYS8 371 aa16.25■□□□□ 0.19
NFE4-201ENST00000420058 LSG1Q9H089 658 aaKnown RBP16.25■□□□□ 0.19
NFE4-201ENST00000420058 GINS2Q9Y248 185 aa16.25■□□□□ 0.19
NFE4-201ENST00000420058 CCDC69A6NI79 296 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 HIDE1A8MVS5 230 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 HBP1O60381 514 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 GPR32O75388 356 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 PDGFBP01127 241 aaPredicted RBP16.24■□□□□ 0.19
NFE4-201ENST00000420058 FGFR1P11362 822 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 SLC26A2P50443 739 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 PLCB3Q01970 1234 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 ANKRD54Q6NXT1 300 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 HEATR3Q7Z4Q2 680 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 SGMS1Q86VZ5 419 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 FAM228AQ86W67 206 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 CCDC60Q8IWA6 550 aaPredicted RBP16.24■□□□□ 0.19
NFE4-201ENST00000420058 SUGP1Q8IWZ8 645 aaKnown RBP16.24■□□□□ 0.19
NFE4-201ENST00000420058 RASGRP4Q8TDF6 673 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 RIC8AQ9NPQ8 531 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 C1orf112Q9NSG2 853 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 FAM86C1Q9NVL1 165 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 TMEM260Q9NX78 707 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 CDH22Q9UJ99 828 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 KMT2EQ8IZD2 1858 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 EVPLQ92817 2033 aa16.24■□□□□ 0.19
NFE4-201ENST00000420058 DCHS1Q96JQ0 3298 aa16.23■□□□□ 0.19
NFE4-201ENST00000420058 GVINP1Q7Z2Y8 2422 aa16.23■□□□□ 0.19
NFE4-201ENST00000420058 SLC27A2O14975 620 aa16.23■□□□□ 0.19
NFE4-201ENST00000420058 ST18O60284 1047 aa16.23■□□□□ 0.19
NFE4-201ENST00000420058 CALM1P0DP23 149 aa16.23■□□□□ 0.19
NFE4-201ENST00000420058 CALM2P0DP24 149 aa16.23■□□□□ 0.19
NFE4-201ENST00000420058 CALM3P0DP25 149 aa16.23■□□□□ 0.19
NFE4-201ENST00000420058 CLK2P49760 499 aaKnown RBP16.23■□□□□ 0.19
NFE4-201ENST00000420058 NECTIN1Q15223 517 aa16.23■□□□□ 0.19
NFE4-201ENST00000420058 PTPN21Q16825 1174 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms