RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 LARP4Q71RC2 724 aaKnown RBP eCLIP4.85□□□□□ -1.63
SDCBPP3-201ENST00000419629 WDR48Q8TAF3 677 aa4.85□□□□□ -1.63
SDCBPP3-201ENST00000419629 NEU4Q8WWR8 484 aaPredicted RBP4.85□□□□□ -1.63
SDCBPP3-201ENST00000419629 DHRS4Q9BTZ2 278 aa4.85□□□□□ -1.63
SDCBPP3-201ENST00000419629 ASXL2Q76L83 1435 aa4.84□□□□□ -1.63
SDCBPP3-201ENST00000419629 PPFIA2O75334 1257 aa4.84□□□□□ -1.63
SDCBPP3-201ENST00000419629 PTPN1P18031 435 aaKnown RBP4.84□□□□□ -1.63
SDCBPP3-201ENST00000419629 RPS19P39019 145 aaKnown RBP4.84□□□□□ -1.63
SDCBPP3-201ENST00000419629 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
SDCBPP3-201ENST00000419629 FAM209AQ5JX71 171 aa4.84□□□□□ -1.63
SDCBPP3-201ENST00000419629 YOD1Q5VVQ6 348 aaPredicted RBP4.84□□□□□ -1.63
SDCBPP3-201ENST00000419629 LDLRAD3Q86YD5 345 aa4.84□□□□□ -1.63
SDCBPP3-201ENST00000419629 PTPRN2Q92932 1015 aa4.84□□□□□ -1.63
SDCBPP3-201ENST00000419629 KIAA1683Q9H0B3 1180 aa4.84□□□□□ -1.63
SDCBPP3-201ENST00000419629 ZNF703Q9H7S9 590 aaPredicted RBP4.84□□□□□ -1.63
SDCBPP3-201ENST00000419629 SRPK3Q9UPE1 567 aa4.84□□□□□ -1.63
SDCBPP3-201ENST00000419629 MRPS23Q9Y3D9 190 aaKnown RBP4.84□□□□□ -1.63
SDCBPP3-201ENST00000419629 DCAF1Q9Y4B6 1507 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 EFCAB14O75071 495 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 ADH4P08319 380 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 HIBADHP31937 336 aaKnown RBP4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 MSX2P35548 267 aaPredicted RBP4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 NANOS3P60323 173 aaKnown RBP4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 IL13RA1P78552 427 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 HHEXQ03014 270 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 TUBA3CQ13748 450 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 EIF4HQ15056 248 aaKnown RBP4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 STILQ15468 1287 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 TUBA3EQ6PEY2 450 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 ARHGAP36Q6ZRI8 547 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 CXXC5Q7LFL8 322 aaKnown RBP4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 MTDHQ86UE4 582 aaKnown RBP4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 NLGN4XQ8N0W4 816 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 JMYQ8N9B5 988 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 LARP4BQ92615 738 aaKnown RBP4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 PCGF6Q9BYE7 350 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 MMRN2Q9H8L6 949 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 MSL2Q9HCI7 577 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 GALNT8Q9NY28 637 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 PLA2G3Q9NZ20 509 aa4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 PUF60Q9UHX1 559 aaKnown RBP4.83□□□□□ -1.64
SDCBPP3-201ENST00000419629 WNT9AO14904 365 aa4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 HMGCRP04035 888 aa4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 KCNQ1P51787 676 aa4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 TRIM68Q6AZZ1 485 aa4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 PCSK4Q6UW60 755 aa4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 USP30Q70CQ3 517 aa4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 GPR135Q8IZ08 494 aa4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 WNK4Q96J92 1243 aa4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 EXOC2Q96KP1 924 aa4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 INCENPQ9NQS7 918 aa4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 TLR9Q9NR96 1032 aa4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 RIC8BQ9NVN3 520 aa4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 AURKAIP1Q9NWT8 199 aaPredicted RBP4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 CEP72Q9P209 647 aa4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 FBXO10Q9UK96 956 aa4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 PTCH2Q9Y6C5 1203 aa4.82□□□□□ -1.64
SDCBPP3-201ENST00000419629 MAN2B1O00754 1011 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 GSTA4O15217 222 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 AMY2AP04746 511 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 PDE6AP16499 860 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 AMY2BP19961 511 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 PTGS1P23219 599 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 ADCY8P40145 1251 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 GUCY1A3Q02108 690 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 PAK1Q13153 545 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 PCOLCEQ15113 449 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 GPR19Q15760 415 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 ZNF627Q7L945 461 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 OTOP2Q7RTS6 562 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 ZNF483Q8TF39 744 aaPredicted RBP4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 MRPL4Q9BYD3 311 aaKnown RBP4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 NELFAQ9H3P2 528 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 BTBD7Q9P203 1132 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 NDOR1Q9UHB4 597 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 SFMBT1Q9UHJ3 866 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 CDC42EP3Q9UKI2 254 aa4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 REXO2Q9Y3B8 237 aaKnown RBP4.81□□□□□ -1.64
SDCBPP3-201ENST00000419629 CCDC180Q9P1Z9 1646 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 MPIG6BO95866 241 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 MAKP20794 623 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 AOAHP28039 575 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 MEOX1P50221 254 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 HGFACQ04756 655 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 GRM7Q14831 915 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 FAM47CQ5HY64 1035 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 FOXB2Q5VYV0 432 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 SPTY2D1Q68D10 685 aaPredicted RBP4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 ADGRE4PQ86SQ3 457 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 NOP9Q86U38 636 aaKnown RBP4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 OSTM1Q86WC4 334 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 SYNPOQ8N3V7 929 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 LILRB2Q8N423 598 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 SH3TC2Q8TF17 1288 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 MAGEB10Q96LZ2 347 aaPredicted RBP4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 AGAP2Q99490 1192 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 AMNQ9BXJ7 453 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 OR10A2Q9H208 303 aa4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 AGO3Q9H9G7 860 aaKnown RBP4.8□□□□□ -1.64
SDCBPP3-201ENST00000419629 TRAF6Q9Y4K3 522 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms