RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 SYNGAP1Q96PV0 1343 aa14.24□□□□□ -0.13
LINC00642-201ENST00000419459 POTEB3A0JP26 581 aa14.24□□□□□ -0.13
LINC00642-201ENST00000419459 GGPS1O95749 300 aa14.24□□□□□ -0.13
LINC00642-201ENST00000419459 TXNP10599 105 aaKnown RBP14.24□□□□□ -0.13
LINC00642-201ENST00000419459 PPP2R5CQ13362 524 aa14.24□□□□□ -0.13
LINC00642-201ENST00000419459 ACVR2BQ13705 512 aa14.24□□□□□ -0.13
LINC00642-201ENST00000419459 POTEBQ6S5H4 581 aa14.24□□□□□ -0.13
LINC00642-201ENST00000419459 HDXQ7Z353 690 aa14.24□□□□□ -0.13
LINC00642-201ENST00000419459 CABP7Q86V35 215 aa14.24□□□□□ -0.13
LINC00642-201ENST00000419459 DHX58Q96C10 678 aa14.24□□□□□ -0.13
LINC00642-201ENST00000419459 RAB34Q9BZG1 259 aa14.24□□□□□ -0.13
LINC00642-201ENST00000419459 JPH1Q9HDC5 661 aaPredicted RBP14.24□□□□□ -0.13
LINC00642-201ENST00000419459 SRRDQ9UH36 339 aa14.24□□□□□ -0.13
LINC00642-201ENST00000419459 RSPH14Q9UHP6 348 aa14.24□□□□□ -0.13
LINC00642-201ENST00000419459 RAB21Q9UL25 225 aa14.24□□□□□ -0.13
LINC00642-201ENST00000419459 RRP15Q9Y3B9 282 aaKnown RBP14.24□□□□□ -0.13
LINC00642-201ENST00000419459 MYH9P35579 1960 aaKnown RBP14.23□□□□□ -0.13
LINC00642-201ENST00000419459 POTEFA5A3E0 1075 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 MAFGO15525 162 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 ICAM3P32942 547 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 HSDL1Q3SXM5 330 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 LONRF3Q496Y0 759 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 CCDC62Q6P9F0 684 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 POTEGQ6S5H5 508 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 B3GNT9Q6UX72 402 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 SRGAP1Q7Z6B7 1085 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 BANK1Q8NDB2 785 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 CCDC34Q96HJ3 373 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 CDHR1Q96JP9 859 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 RIT2Q99578 217 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 GBP3Q9H0R5 595 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 ABHD16BQ9H3Z7 469 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 WRAP73Q9P2S5 460 aaPredicted RBP14.23□□□□□ -0.13
LINC00642-201ENST00000419459 HOOK1Q9UJC3 728 aaKnown RBP14.23□□□□□ -0.13
LINC00642-201ENST00000419459 TRIM17Q9Y577 477 aa14.23□□□□□ -0.13
LINC00642-201ENST00000419459 MED24O75448 989 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 FARP2O94887 1054 aaPredicted RBP14.22□□□□□ -0.13
LINC00642-201ENST00000419459 LMAN1P49257 510 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 CTTNQ14247 550 aaKnown RBP14.22□□□□□ -0.13
LINC00642-201ENST00000419459 PDIA5Q14554 519 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 SPECC1LQ69YQ0 1117 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 CATSPER3Q86XQ3 398 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 MSANTD4Q8NCY6 345 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 SCFD2Q8WU76 684 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 STAMQ92783 540 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 AK8Q96MA6 479 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 WDR24Q96S15 920 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 TBC1D22BQ9NU19 505 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 SLC9A2Q9UBY0 812 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 DACH1Q9UI36 760 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 ZBTB39O15060 712 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 XRCC5P13010 732 aaKnown RBP14.22□□□□□ -0.13
LINC00642-201ENST00000419459 PLCG1P19174 1290 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 CCT6AP40227 531 aaKnown RBP14.22□□□□□ -0.13
LINC00642-201ENST00000419459 TTLL4Q14679 1199 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 KRT79Q5XKE5 535 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 OLFML2BQ68BL8 750 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 MIER3Q7Z3K6 550 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 KCNK18Q7Z418 384 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 GRAMD1CQ8IYS0 662 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 EIF2AK1Q9BQI3 630 aaKnown RBP14.22□□□□□ -0.13
LINC00642-201ENST00000419459 NAA15Q9BXJ9 866 aaKnown RBP14.22□□□□□ -0.13
LINC00642-201ENST00000419459 VTA1Q9NP79 307 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 DISC1Q9NRI5 854 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 TCEAL9Q9UHQ7 104 aa14.22□□□□□ -0.13
LINC00642-201ENST00000419459 LOC102724159A0A0B4J2E5 919 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 FOXN1O15353 648 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 IGHA2P01877 340 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 CCDC175P0C221 793 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 ZNF865P0CJ78 1059 aaPredicted RBP14.21□□□□□ -0.13
LINC00642-201ENST00000419459 SPATA31C1P0DKV0 1188 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 TGFB3P10600 412 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 SMPD1P17405 629 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 NOP2P46087 812 aaKnown RBP14.21□□□□□ -0.13
LINC00642-201ENST00000419459 CHMP4BP1P59074 171 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 GRB10Q13322 594 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 PWP2Q15269 919 aaKnown RBP14.21□□□□□ -0.13
LINC00642-201ENST00000419459 UGCGQ16739 394 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 NAALADL2Q58DX5 795 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 TRPV1Q8NER1 839 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 RAET1EQ8TD07 263 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 DYDC2Q96IM9 177 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 SENP7Q9BQF6 1050 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 SH2D3AQ9BRG2 576 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 ACBD3Q9H3P7 528 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 MLXIPQ9HAP2 919 aa14.21□□□□□ -0.13
LINC00642-201ENST00000419459 ADCY3O60266 1144 aa14.2□□□□□ -0.14
LINC00642-201ENST00000419459 CASP1P29466 404 aa14.2□□□□□ -0.14
LINC00642-201ENST00000419459 ACTR2P61160 394 aa14.2□□□□□ -0.14
LINC00642-201ENST00000419459 PSMC6P62333 389 aa14.2□□□□□ -0.14
LINC00642-201ENST00000419459 BEND6Q5SZJ8 279 aaPredicted RBP14.2□□□□□ -0.14
LINC00642-201ENST00000419459 TRIM50Q86XT4 487 aa14.2□□□□□ -0.14
LINC00642-201ENST00000419459 TPH2Q8IWU9 490 aa14.2□□□□□ -0.14
LINC00642-201ENST00000419459 C10orf67Q8IYJ2 551 aa14.2□□□□□ -0.14
LINC00642-201ENST00000419459 TC2NQ8N9U0 490 aa14.2□□□□□ -0.14
LINC00642-201ENST00000419459 PNMA5Q96PV4 448 aa14.2□□□□□ -0.14
LINC00642-201ENST00000419459 LXNQ9BS40 222 aa14.2□□□□□ -0.14
LINC00642-201ENST00000419459 CCSER1Q9C0I3 900 aa14.2□□□□□ -0.14
LINC00642-201ENST00000419459 SERTAD1Q9UHV2 236 aa14.2□□□□□ -0.14
LINC00642-201ENST00000419459 KIAA1024Q9UPX6 916 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms