RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 NR2F2P24468 414 aa18.51■□□□□ 0.55
SSBP3-205ENST00000417664 PWP2Q15269 919 aaKnown RBP18.51■□□□□ 0.55
SSBP3-205ENST00000417664 SYCP1Q15431 976 aa18.51■□□□□ 0.55
SSBP3-205ENST00000417664 ODR4Q5SWX8 454 aa18.51■□□□□ 0.55
SSBP3-205ENST00000417664 GPAT2Q6NUI2 795 aa18.51■□□□□ 0.55
SSBP3-205ENST00000417664 FRMD5Q7Z6J6 570 aa18.51■□□□□ 0.55
SSBP3-205ENST00000417664 GOLGA5Q8TBA6 731 aa18.51■□□□□ 0.55
SSBP3-205ENST00000417664 DRC1Q96MC2 740 aa18.51■□□□□ 0.55
SSBP3-205ENST00000417664 FIZ1Q96SL8 496 aa18.51■□□□□ 0.55
SSBP3-205ENST00000417664 DNAJC7Q99615 494 aa18.51■□□□□ 0.55
SSBP3-205ENST00000417664 TRMT1Q9NXH9 659 aaKnown RBP18.51■□□□□ 0.55
SSBP3-205ENST00000417664 SLC45A1Q9Y2W3 748 aa18.51■□□□□ 0.55
SSBP3-205ENST00000417664 R3HCC1Q9Y3T6 440 aaKnown RBP18.51■□□□□ 0.55
SSBP3-205ENST00000417664 PAXBP1Q9Y5B6 917 aa18.51■□□□□ 0.55
SSBP3-205ENST00000417664 TTC26A0AVF1 554 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 SLC16A3O15427 465 aaKnown RBP18.5■□□□□ 0.55
SSBP3-205ENST00000417664 HIP1RO75146 1068 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 PRPF6O94906 941 aaKnown RBP18.5■□□□□ 0.55
SSBP3-205ENST00000417664 HOXD13P35453 343 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 MAPK7Q13164 816 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 CYP26C1Q6V0L0 522 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 TRIM59Q8IWR1 403 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 FAM133AQ8N9E0 248 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 ZNF397Q8NF99 534 aaPredicted RBP18.5■□□□□ 0.55
SSBP3-205ENST00000417664 PAGR1Q9BTK6 254 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 EDEM3Q9BZQ6 932 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 TTYH3Q9C0H2 523 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 MROH8Q9H579 483 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 METTL14Q9HCE5 456 aaKnown RBP18.5■□□□□ 0.55
SSBP3-205ENST00000417664 LCTP09848 1927 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 KIAA1217Q5T5P2 1943 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 TGFB3P10600 412 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 ERCC3P19447 782 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 ZBED6P86452 979 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 MIS18BP1Q6P0N0 1132 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 SHCBP1Q8NEM2 672 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 RBPJLQ9UBG7 517 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 PPP2R2CQ9Y2T4 447 aa18.5■□□□□ 0.55
SSBP3-205ENST00000417664 SFI1A8K8P3 1242 aa18.49■□□□□ 0.55
SSBP3-205ENST00000417664 CNTN2Q02246 1040 aa18.49■□□□□ 0.55
SSBP3-205ENST00000417664 MYBPC2Q14324 1141 aa18.49■□□□□ 0.55
SSBP3-205ENST00000417664 ILDR2Q71H61 639 aa18.49■□□□□ 0.55
SSBP3-205ENST00000417664 HS2ST1Q7LGA3 356 aa18.49■□□□□ 0.55
SSBP3-205ENST00000417664 DAW1Q8N136 415 aa18.49■□□□□ 0.55
SSBP3-205ENST00000417664 STRA6Q9BX79 667 aa18.49■□□□□ 0.55
SSBP3-205ENST00000417664 ST6GALNAC4Q9H4F1 302 aa18.49■□□□□ 0.55
SSBP3-205ENST00000417664 CGNQ9P2M7 1197 aaKnown RBP18.49■□□□□ 0.55
SSBP3-205ENST00000417664 SIK3Q9Y2K2 1263 aa18.49■□□□□ 0.55
SSBP3-205ENST00000417664 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.49■□□□□ 0.55
SSBP3-205ENST00000417664 ASTN1O14525 1302 aa18.49■□□□□ 0.55
SSBP3-205ENST00000417664 PPP1R37O75864 691 aa18.48■□□□□ 0.55
SSBP3-205ENST00000417664 CETPP11597 493 aa18.48■□□□□ 0.55
SSBP3-205ENST00000417664 PLS3P13797 630 aa18.48■□□□□ 0.55
SSBP3-205ENST00000417664 ACTR2P61160 394 aa18.48■□□□□ 0.55
SSBP3-205ENST00000417664 UGCGQ16739 394 aa18.48■□□□□ 0.55
SSBP3-205ENST00000417664 KCNV1Q6PIU1 500 aa18.48■□□□□ 0.55
SSBP3-205ENST00000417664 ABHD15Q6UXT9 468 aa18.48■□□□□ 0.55
SSBP3-205ENST00000417664 TMEM174Q8WUU8 243 aa18.48■□□□□ 0.55
SSBP3-205ENST00000417664 PCMTD1Q96MG8 357 aaPredicted RBP18.48■□□□□ 0.55
SSBP3-205ENST00000417664 MKNK1Q9BUB5 465 aa18.48■□□□□ 0.55
SSBP3-205ENST00000417664 TMEM206Q9H813 350 aa18.48■□□□□ 0.55
SSBP3-205ENST00000417664 C17orf75Q9HAS0 396 aa18.48■□□□□ 0.55
SSBP3-205ENST00000417664 ATG7O95352 703 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 NR3C1P04150 777 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 CCDC175P0C221 793 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 NMT1P30419 496 aaKnown RBP18.47■□□□□ 0.55
SSBP3-205ENST00000417664 GJA5P36382 358 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 GTF2A2P52657 109 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 SNRPFP62306 86 aaKnown RBP18.47■□□□□ 0.55
SSBP3-205ENST00000417664 XKR9Q5GH70 373 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 GBP3Q9H0R5 595 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 ZNHIT6Q9NWK9 470 aaKnown RBP18.47■□□□□ 0.55
SSBP3-205ENST00000417664 GABBR1Q9UBS5 961 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 ARMCX3Q9UH62 379 aaPredicted RBP18.47■□□□□ 0.55
SSBP3-205ENST00000417664 MYH11P35749 1972 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 SOWAHBA6NEL2 793 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 TGFB1I1O43294 461 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 USO1O60763 962 aaKnown RBP18.47■□□□□ 0.55
SSBP3-205ENST00000417664 EPB41P11171 864 aaKnown RBP18.47■□□□□ 0.55
SSBP3-205ENST00000417664 CDK17Q00537 523 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 NEDD9Q14511 834 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 KCTD2Q14681 263 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 MEA1Q16626 185 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 MAP1SQ66K74 1059 aaPredicted RBP18.47■□□□□ 0.55
SSBP3-205ENST00000417664 REXO1L1PQ8IX06 675 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 TXNRD2Q9NNW7 524 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 KCNG1Q9UIX4 513 aa18.47■□□□□ 0.55
SSBP3-205ENST00000417664 DNAJC25-GNG10A0A024R161 153 aa18.46■□□□□ 0.55
SSBP3-205ENST00000417664 SOWAHDA6NJG2 315 aa18.46■□□□□ 0.55
SSBP3-205ENST00000417664 RNF225M0QZC1 329 aaPredicted RBP18.46■□□□□ 0.55
SSBP3-205ENST00000417664 BACH1O14867 736 aa18.46■□□□□ 0.55
SSBP3-205ENST00000417664 SUPT20HL2P0C7V6 817 aa18.46■□□□□ 0.55
SSBP3-205ENST00000417664 ERVK-9P63128 1117 aa18.46■□□□□ 0.55
SSBP3-205ENST00000417664 ERVK-24P63145 666 aa18.46■□□□□ 0.55
SSBP3-205ENST00000417664 CCNA1P78396 465 aa18.46■□□□□ 0.55
SSBP3-205ENST00000417664 ANO5Q75V66 913 aa18.46■□□□□ 0.55
SSBP3-205ENST00000417664 SLC9A9Q8IVB4 645 aa18.46■□□□□ 0.55
SSBP3-205ENST00000417664 KIF18AQ8NI77 898 aa18.46■□□□□ 0.55
SSBP3-205ENST00000417664 KIFAP3Q92845 792 aa18.46■□□□□ 0.55
SSBP3-205ENST00000417664 RASSF10A6NK89 507 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms