RNA–Protein interactions for RNA: ENST00000417493.1

SNRNP25-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-204ENST00000417493 NEMFO60524 1076 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 CHRNA1P02708 482 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 P4HBP07237 508 aaKnown RBP12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 GHRP10912 638 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 PBX2P40425 430 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 QARSP47897 775 aaKnown RBP12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 TRAPPC10P48553 1259 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 MGAT3Q09327 533 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 PAK2Q13177 524 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 NR5A1Q13285 461 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 GPNMBQ14956 572 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 FBXO47Q5MNV8 452 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 OTUD6AQ7L8S5 288 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 MYOCDQ8IZQ8 938 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 NEK9Q8TD19 979 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 OXER1Q8TDS5 423 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 TBC1D32Q96NH3 1257 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 GUCD1Q96NT3 240 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 SAMD11Q96NU1 681 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 UIMC1Q96RL1 719 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 KIF2CQ99661 725 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 PCDHA12Q9UN75 941 aa12.31□□□□□ -0.44
SNRNP25-204ENST00000417493 GPR182O15218 404 aa12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 GTPBP6O43824 516 aaPredicted RBP12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 SLC37A4O43826 429 aa12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 C22orf31O95567 290 aa12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 CA3P07451 260 aa12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 STAG3L1P0CL83 205 aa12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 RABGGTBP53611 331 aa12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 CRYBB1P53674 252 aaPredicted RBP12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 LPIN1Q14693 890 aa12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 EPHA7Q15375 998 aa12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 TRMT1LQ7Z2T5 733 aaKnown RBP12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 FBXO18Q8NFZ0 1043 aa12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 TRAPPC12Q8WVT3 735 aa12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 TNFRSF25Q93038 417 aa12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 CCDC43Q96MW1 224 aaKnown RBP12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 SCLT1Q96NL6 688 aa12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 YME1L1Q96TA2 773 aa12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 NIFKQ9BYG3 293 aaKnown RBP12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 GJB4Q9NTQ9 266 aa12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 SEPT9Q9UHD8 586 aaPredicted RBP12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 AKT3Q9Y243 479 aa12.3□□□□□ -0.44
SNRNP25-204ENST00000417493 RALGAPA2Q2PPJ7 1873 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 NLRC5Q86WI3 1866 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 DDX11L8A8MPP1 907 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 EDIL3O43854 480 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 GAS2O43903 313 aaKnown RBP12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 RPS6KA5O75582 802 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 ATP4AP20648 1035 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 FOSBP53539 338 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 GRIN2CQ14957 1233 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 TMEM266Q2M3C6 531 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 NCAPH2Q6IBW4 605 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 EFCAB12Q6NXP0 572 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 B3GNT9Q6UX72 402 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 POTEDQ86YR6 584 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 SLC7A3Q8WY07 619 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 MYLIPQ8WY64 445 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 TOP1MTQ969P6 601 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 RAB34Q9BZG1 259 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 INO80BQ9C086 356 aaPredicted RBP12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 ZSWIM4Q9H7M6 989 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 YBX2Q9Y2T7 364 aaKnown RBP12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 RWDD3Q9Y3V2 267 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 STK24Q9Y6E0 443 aa12.29□□□□□ -0.44
SNRNP25-204ENST00000417493 ZBTB42B2RXF5 422 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 H3BQV1 296 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 ZNF862O60290 1169 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 RFC5P40937 340 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 DEFB103AP81534 67 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 GUCY1B3Q02153 619 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 NOSTRINQ8IVI9 506 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 C4orf19Q8IY42 314 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 KIAA0319LQ8IZA0 1049 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 MAFAQ8NHW3 353 aaPredicted RBP12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 ERMNQ8TAM6 284 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 TMX3Q96JJ7 454 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 TGS1Q96RS0 853 aaKnown RBP12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 SUGCTQ9HAC7 445 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 C1orf112Q9NSG2 853 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 VAV3Q9UKW4 847 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 SMC3Q9UQE7 1217 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 GINS2Q9Y248 185 aa12.28□□□□□ -0.44
SNRNP25-204ENST00000417493 COL4A6Q14031 1691 aa12.27□□□□□ -0.45
SNRNP25-204ENST00000417493 DENND3A2RUS2 1198 aa12.27□□□□□ -0.45
SNRNP25-204ENST00000417493 CD52P31358 61 aa12.27□□□□□ -0.45
SNRNP25-204ENST00000417493 HTRA4P83105 476 aaPredicted RBP12.27□□□□□ -0.45
SNRNP25-204ENST00000417493 TAP1Q03518 808 aa12.27□□□□□ -0.45
SNRNP25-204ENST00000417493 TMEM62Q0P6H9 643 aa12.27□□□□□ -0.45
SNRNP25-204ENST00000417493 ST3GAL1Q11201 340 aa12.27□□□□□ -0.45
SNRNP25-204ENST00000417493 NFX1Q12986 1120 aaKnown RBP12.27□□□□□ -0.45
SNRNP25-204ENST00000417493 MTERF2Q49AM1 385 aa12.27□□□□□ -0.45
SNRNP25-204ENST00000417493 FAM117BQ6P1L5 589 aa12.27□□□□□ -0.45
SNRNP25-204ENST00000417493 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.27□□□□□ -0.452e-7■■■■■ 81.2
SNRNP25-204ENST00000417493 NPAS4Q8IUM7 802 aa12.27□□□□□ -0.45
SNRNP25-204ENST00000417493 BANK1Q8NDB2 785 aa12.27□□□□□ -0.45
SNRNP25-204ENST00000417493 TCP11Q8WWU5 503 aa12.27□□□□□ -0.45
SNRNP25-204ENST00000417493 HAS1Q92839 578 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms