RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 PLEKHA8P1O95397 391 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 PDE4AP27815 886 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 UBE3AQ05086 875 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 TROAPQ12815 778 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 TRAF1Q13077 416 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 KCNC3Q14003 757 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 WTAPQ15007 396 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 RARS2Q5T160 578 aaKnown RBP10.73□□□□□ -0.69
LINC01238-201ENST00000416204 MTHFD1LQ6UB35 978 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 LRRC55Q6ZSA7 311 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 TMC7Q7Z402 723 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 GIMAP8Q8ND71 665 aaPredicted RBP10.73□□□□□ -0.69
LINC01238-201ENST00000416204 CYP2W1Q8TAV3 490 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 AUTS2Q8WXX7 1259 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 MRPS27Q92552 414 aaKnown RBP10.73□□□□□ -0.69
LINC01238-201ENST00000416204 GPRASP2Q96D09 838 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 PGBD1Q96JS3 809 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 AZI2Q9H6S1 392 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 JPH1Q9HDC5 661 aaPredicted RBP10.73□□□□□ -0.69
LINC01238-201ENST00000416204 ST3GAL5Q9UNP4 418 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 NR2E1Q9Y466 385 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 PCDHA2Q9Y5H9 948 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 FAM186AA6NE01 2351 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 GVINP1Q7Z2Y8 2422 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 MED19A0JLT2 244 aaPredicted RBP10.72□□□□□ -0.69
LINC01238-201ENST00000416204 RXRAP19793 462 aa10.72□□□□□ -0.69
LINC01238-201ENST00000416204 KLRC1P26715 233 aa10.72□□□□□ -0.69
LINC01238-201ENST00000416204 KIZQ2M2Z5 673 aa10.72□□□□□ -0.69
LINC01238-201ENST00000416204 XRRA1Q6P2D8 792 aa10.72□□□□□ -0.69
LINC01238-201ENST00000416204 PLEKHM2Q8IWE5 1019 aa10.72□□□□□ -0.69
LINC01238-201ENST00000416204 UBALD2Q8IYN6 164 aa10.72□□□□□ -0.69
LINC01238-201ENST00000416204 CCDC82Q8N4S0 544 aa10.72□□□□□ -0.69
LINC01238-201ENST00000416204 KCNG4Q8TDN1 519 aa10.72□□□□□ -0.69
LINC01238-201ENST00000416204 RRP36Q96EU6 259 aaKnown RBP10.72□□□□□ -0.69
LINC01238-201ENST00000416204 ZNF668Q96K58 619 aaPredicted RBP10.72□□□□□ -0.69
LINC01238-201ENST00000416204 OSMRQ99650 979 aa10.72□□□□□ -0.69
LINC01238-201ENST00000416204 ATP6V0A4Q9HBG4 840 aa10.72□□□□□ -0.69
LINC01238-201ENST00000416204 RGS18Q9NS28 235 aa10.72□□□□□ -0.69
LINC01238-201ENST00000416204 HCFC2Q9Y5Z7 792 aa10.72□□□□□ -0.69
LINC01238-201ENST00000416204 UBIAD1Q9Y5Z9 338 aa10.72□□□□□ -0.69
LINC01238-201ENST00000416204 ZNF292O60281 2723 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 ERICH2A1L162 156 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 C9IYK1 514 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 NT5C1B-RDH14C9J2C7 533 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 LAG3P18627 525 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 NT5C2P49902 561 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 STAT5BP51692 787 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 ACTR2P61160 394 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 TRDNQ13061 729 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 CWF19L1Q69YN2 538 aaKnown RBP10.71□□□□□ -0.69
LINC01238-201ENST00000416204 CES5AQ6NT32 575 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 KCNT2Q6UVM3 1135 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 TMEM184AQ6ZMB5 413 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 SLC24A5Q71RS6 500 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 ERMP1Q7Z2K6 904 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 CATIPQ7Z7H3 387 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 FAM228AQ86W67 206 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 LOXHD1Q8IVV2 1947 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 KIAA0319LQ8IZA0 1049 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 TDRD5Q8NAT2 981 aaKnown RBP10.71□□□□□ -0.69
LINC01238-201ENST00000416204 CDHR1Q96JP9 859 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 CASD1Q96PB1 797 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 ADAM7Q9H2U9 754 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 PSTPIP2Q9H939 334 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 JADE2Q9NQC1 790 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 RNF19AQ9NV58 838 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 SLC9A2Q9UBY0 812 aa10.71□□□□□ -0.69
LINC01238-201ENST00000416204 SEC63Q9UGP8 760 aaKnown RBP10.71□□□□□ -0.69
LINC01238-201ENST00000416204 PUF60Q9UHX1 559 aaKnown RBP10.71□□□□□ -0.69
LINC01238-201ENST00000416204 FNDC1Q4ZHG4 1894 aaPredicted RBP10.7□□□□□ -0.7
LINC01238-201ENST00000416204 SMIM35A0A1B0GVV1 85 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 C2orf71A6NGG8 1288 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 PIK3CDO00329 1044 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 BACH1O14867 736 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 CLASP2O75122 1294 aaKnown RBP10.7□□□□□ -0.7
LINC01238-201ENST00000416204 VTNP04004 478 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 CYP21A2P08686 494 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 EPCAMP16422 314 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 METAP2P50579 478 aaKnown RBP eCLIP10.7□□□□□ -0.7
LINC01238-201ENST00000416204 ANTXR2P58335 489 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 PTH1RQ03431 593 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 ITGB3BPQ13352 177 aaPredicted RBP10.7□□□□□ -0.7
LINC01238-201ENST00000416204 HDAC1Q13547 482 aaPredicted RBP10.7□□□□□ -0.7
LINC01238-201ENST00000416204 LONRF3Q496Y0 759 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 TPRNQ4KMQ1 711 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 RALYLQ86SE5 291 aaKnown RBP10.7□□□□□ -0.7
LINC01238-201ENST00000416204 KIAA2013Q8IYS2 634 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 SRBD1Q8N5C6 995 aaKnown RBP10.7□□□□□ -0.7
LINC01238-201ENST00000416204 CASP10Q92851 521 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 RMDN1Q96DB5 314 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 YTHDC1Q96MU7 727 aaKnown RBP10.7□□□□□ -0.7
LINC01238-201ENST00000416204 ZNF558Q96NG5 402 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 KCNH7Q9NS40 1196 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 DBR1Q9UK59 544 aaKnown RBP10.7□□□□□ -0.7
LINC01238-201ENST00000416204 PCDHA6Q9UN73 950 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 PCDHA8Q9Y5H6 950 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 SQORQ9Y6N5 450 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 R4GN57 208 aa10.7□□□□□ -0.7
LINC01238-201ENST00000416204 KDM3AQ9Y4C1 1321 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 SPDYE3A6NKU9 549 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms