RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 TBCKQ8TEA7 893 aa19.9■□□□□ 0.78
PDLIM2-208ENST00000416159 ZNF689Q96CS4 500 aaPredicted RBP19.9■□□□□ 0.78
PDLIM2-208ENST00000416159 FAM167AQ96KS9 214 aa19.9■□□□□ 0.78
PDLIM2-208ENST00000416159 RIT2Q99578 217 aa19.9■□□□□ 0.78
PDLIM2-208ENST00000416159 GABBR1Q9UBS5 961 aa19.9■□□□□ 0.78
PDLIM2-208ENST00000416159 NLRC5Q86WI3 1866 aa19.9■□□□□ 0.78
PDLIM2-208ENST00000416159 ZBTB42B2RXF5 422 aa19.89■□□□□ 0.77
PDLIM2-208ENST00000416159 C5orf67F2Z3F1 127 aa19.89■□□□□ 0.77
PDLIM2-208ENST00000416159 DGKIO75912 1065 aa19.89■□□□□ 0.77
PDLIM2-208ENST00000416159 STAG3L1P0CL83 205 aa19.89■□□□□ 0.77
PDLIM2-208ENST00000416159 BMPR1AP36894 532 aa19.89■□□□□ 0.77
PDLIM2-208ENST00000416159 RALGAPA2Q2PPJ7 1873 aa19.89■□□□□ 0.77
PDLIM2-208ENST00000416159 TIGD5Q53EQ6 642 aa19.89■□□□□ 0.77
PDLIM2-208ENST00000416159 NPAS4Q8IUM7 802 aa19.89■□□□□ 0.77
PDLIM2-208ENST00000416159 ADGRA3Q8IWK6 1321 aa19.89■□□□□ 0.77
PDLIM2-208ENST00000416159 DAGLBQ8NCG7 672 aa19.89■□□□□ 0.77
PDLIM2-208ENST00000416159 LINC01599Q8WXQ3 324 aa19.89■□□□□ 0.77
PDLIM2-208ENST00000416159 TEKT3Q9BXF9 490 aa19.89■□□□□ 0.77
PDLIM2-208ENST00000416159 RC3H2Q9HBD1 1191 aaKnown RBP19.89■□□□□ 0.77
PDLIM2-208ENST00000416159 DISC1Q9NRI5 854 aa19.89■□□□□ 0.77
PDLIM2-208ENST00000416159 BRWD1Q9NSI6 2320 aa19.89■□□□□ 0.77
PDLIM2-208ENST00000416159 MAGEB2O15479 319 aa19.88■□□□□ 0.77
PDLIM2-208ENST00000416159 GAS7O60861 476 aa19.88■□□□□ 0.77
PDLIM2-208ENST00000416159 CDKL5O76039 1030 aa19.88■□□□□ 0.77
PDLIM2-208ENST00000416159 C22orf31O95567 290 aa19.88■□□□□ 0.77
PDLIM2-208ENST00000416159 SFNP31947 248 aa19.88■□□□□ 0.77
PDLIM2-208ENST00000416159 CTNNB1P35222 781 aa19.88■□□□□ 0.77
PDLIM2-208ENST00000416159 NFX1Q12986 1120 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-208ENST00000416159 BTG3Q14201 252 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-208ENST00000416159 Q4G0T1 1027 aa19.88■□□□□ 0.77
PDLIM2-208ENST00000416159 TRMT1LQ7Z2T5 733 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-208ENST00000416159 SLC5A5Q92911 643 aa19.88■□□□□ 0.77
PDLIM2-208ENST00000416159 NRBP2Q9NSY0 501 aa19.88■□□□□ 0.77
PDLIM2-208ENST00000416159 GINS2Q9Y248 185 aa19.88■□□□□ 0.77
PDLIM2-208ENST00000416159 VCANP13611 3396 aa19.88■□□□□ 0.77
PDLIM2-208ENST00000416159 WDR81Q562E7 1941 aa19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 CYP3A7-CYP3A51PA0A087WV96 503 aa19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 M0R2N6 131 aa19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 RPS6KA5O75582 802 aa19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 CYP3A7P24462 503 aa19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 JAK3P52333 1124 aa19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 TMEM266Q2M3C6 531 aa19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 LRCH2Q5VUJ6 765 aa19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 CRIPAKQ8N1N5 446 aa19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 CLP1Q92989 425 aaKnown RBP19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 C11orf84Q9BUA3 381 aaPredicted RBP19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 LMAN2LQ9H0V9 348 aa19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 SLKQ9H2G2 1235 aaPredicted RBP19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 UBE2ZQ9H832 354 aaPredicted RBP19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 CDHR5Q9HBB8 845 aa19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 ERVK-5Q9HDB9 667 aa19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 RNF216Q9NWF9 866 aaPredicted RBP19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 NOC2LQ9Y3T9 749 aaKnown RBP19.87■□□□□ 0.77
PDLIM2-208ENST00000416159 GPR182O15218 404 aa19.86■□□□□ 0.77
PDLIM2-208ENST00000416159 LINC00271P0C7V0 271 aa19.86■□□□□ 0.77
PDLIM2-208ENST00000416159 CRYBB1P53674 252 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-208ENST00000416159 ANAPC15P60006 121 aa19.86■□□□□ 0.77
PDLIM2-208ENST00000416159 MOXD1Q6UVY6 613 aa19.86■□□□□ 0.77
PDLIM2-208ENST00000416159 CMTR2Q8IYT2 770 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-208ENST00000416159 ZNF710Q8N1W2 664 aa19.86■□□□□ 0.77
PDLIM2-208ENST00000416159 METTL13Q8N6R0 699 aa19.86■□□□□ 0.77
PDLIM2-208ENST00000416159 BANK1Q8NDB2 785 aa19.86■□□□□ 0.77
PDLIM2-208ENST00000416159 RDM1Q8NG50 284 aa19.86■□□□□ 0.77
PDLIM2-208ENST00000416159 TMX1Q9H3N1 280 aa19.86■□□□□ 0.77
PDLIM2-208ENST00000416159 LRFN2Q9ULH4 789 aa19.86■□□□□ 0.77
PDLIM2-208ENST00000416159 PSMD10O75832 226 aa19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 OATP04181 439 aa19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 XBP1P17861 261 aa19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 TMOD1P28289 359 aa19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 SCRN1Q12765 414 aa19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 NONOQ15233 471 aaKnown RBP eCLIP19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 NPY5RQ15761 445 aa19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 KRT25Q7Z3Z0 450 aa19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 MBOAT7Q96N66 472 aa19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 AIFM3Q96NN9 605 aa19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 NECAB3Q96P71 396 aaPredicted RBP19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 PLVAPQ9BX97 442 aa19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 UNC45AQ9H3U1 944 aa19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 NSUN3Q9H649 340 aaKnown RBP19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 C1orf112Q9NSG2 853 aa19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 ST3GAL5Q9UNP4 418 aa19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 MYO7AQ13402 2215 aa19.85■□□□□ 0.77
PDLIM2-208ENST00000416159 CHMP2AO43633 222 aa19.84■□□□□ 0.77
PDLIM2-208ENST00000416159 ZNF862O60290 1169 aa19.84■□□□□ 0.77
PDLIM2-208ENST00000416159 PFKFB2O60825 505 aa19.84■□□□□ 0.77
PDLIM2-208ENST00000416159 GPR32O75388 356 aa19.84■□□□□ 0.77
PDLIM2-208ENST00000416159 TDP2O95551 362 aa19.84■□□□□ 0.77
PDLIM2-208ENST00000416159 VTNP04004 478 aa19.84■□□□□ 0.77
PDLIM2-208ENST00000416159 SARSP49591 514 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-208ENST00000416159 ANKRD1Q15327 319 aa19.84■□□□□ 0.77
PDLIM2-208ENST00000416159 EFCAB12Q6NXP0 572 aa19.84■□□□□ 0.77
PDLIM2-208ENST00000416159 MIER3Q7Z3K6 550 aa19.84■□□□□ 0.77
PDLIM2-208ENST00000416159 TMEM40Q8WWA1 233 aa19.84■□□□□ 0.77
PDLIM2-208ENST00000416159 MAP7D2Q96T17 732 aa19.84■□□□□ 0.77
PDLIM2-208ENST00000416159 RGS18Q9NS28 235 aa19.84■□□□□ 0.77
PDLIM2-208ENST00000416159 TPCN1Q9ULQ1 816 aa19.84■□□□□ 0.77
PDLIM2-208ENST00000416159 PCDHB7Q9Y5E2 793 aa19.84■□□□□ 0.77
PDLIM2-208ENST00000416159 STK36Q9NRP7 1315 aa19.83■□□□□ 0.77
PDLIM2-208ENST00000416159 DENND3A2RUS2 1198 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms