RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CDK8P49336 464 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 RNF169Q8NCN4 708 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 ABTB1Q969K4 478 aaPredicted RBP13.9□□□□□ -0.18
SCN1B-202ENST00000415950 IWS1Q96ST2 819 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 TTC7AQ9ULT0 858 aaPredicted RBP13.9□□□□□ -0.18
SCN1B-202ENST00000415950 NOD1Q9Y239 953 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 AGLP35573 1532 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 LAD1O00515 517 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 HNRNPDLO14979 420 aaKnown RBP13.9□□□□□ -0.18
SCN1B-202ENST00000415950 ZBED4O75132 1171 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 TRIM49P0CI25 452 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 TRIM49CP0CI26 452 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 CA4P22748 312 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 MAPK4P31152 587 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 LRRC63Q05C16 580 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 PBKQ96KB5 322 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 INTS13Q9NVM9 706 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 STK17AQ9UEE5 414 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 PNMA2Q9UL42 364 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 STAM2O75886 525 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 MDH1P40925 334 aaKnown RBP13.89□□□□□ -0.19
SCN1B-202ENST00000415950 MYL7Q01449 175 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 PTK2Q05397 1052 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 GNPTABQ3T906 1256 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 MMEL1Q495T6 779 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 SFR1Q86XK3 245 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 TRIM50Q86XT4 487 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 XDHP47989 1333 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 RAD51CO43502 376 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 CCDC117Q8IWD4 279 aaPredicted RBP13.89□□□□□ -0.19
SCN1B-202ENST00000415950 KIF2BQ8N4N8 673 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 PHF20Q9BVI0 1012 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 BCAP29Q9UHQ4 241 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 ANAPC5Q9UJX4 755 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 BZW2Q9Y6E2 419 aaKnown RBP13.89□□□□□ -0.19
SCN1B-202ENST00000415950 CROCC2H7BZ55 1655 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 LUC7L3O95232 432 aaKnown RBP13.89□□□□□ -0.19
SCN1B-202ENST00000415950 SRGNP10124 158 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 FGFR4P22455 802 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 ASPHQ12797 758 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 JADE1Q6IE81 842 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 RNF168Q8IYW5 571 aaPredicted RBP13.89□□□□□ -0.19
SCN1B-202ENST00000415950 MRPL46Q9H2W6 279 aaKnown RBP13.89□□□□□ -0.19
SCN1B-202ENST00000415950 DNAJC12Q9UKB3 198 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 NOC2LQ9Y3T9 749 aaKnown RBP13.89□□□□□ -0.19
SCN1B-202ENST00000415950 PLEKHG1Q9ULL1 1385 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 CAPN9O14815 690 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 IL1RL1Q01638 556 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 ANKRD35Q8N283 1001 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 PIP4K2CQ8TBX8 421 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 HNRNPLLQ8WVV9 542 aaKnown RBP13.89□□□□□ -0.19
SCN1B-202ENST00000415950 FIS1Q9Y3D6 152 aa13.89□□□□□ -0.19
SCN1B-202ENST00000415950 ECEL1O95672 775 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 LMNB1P20700 586 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 PMS1P54277 932 aaKnown RBP13.88□□□□□ -0.19
SCN1B-202ENST00000415950 ICA1Q05084 483 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 COASYQ13057 564 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 CEP95Q96GE4 821 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 CARD10Q9BWT7 1032 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 TSPYL2Q9H2G4 693 aaPredicted RBP13.88□□□□□ -0.19
SCN1B-202ENST00000415950 ACTR5Q9H9F9 607 aaPredicted RBP13.88□□□□□ -0.19
SCN1B-202ENST00000415950 DBR1Q9UK59 544 aaKnown RBP13.88□□□□□ -0.19
SCN1B-202ENST00000415950 A0A087X0B3 334 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 A0A1W2PQC6 194 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 ENO4A6NNW6 628 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 BBS9Q3SYG4 887 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 PARP9Q8IXQ6 854 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 GABPB2Q8TAK5 448 aaPredicted RBP13.88□□□□□ -0.19
SCN1B-202ENST00000415950 CHURC1Q8WUH1 139 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 NT5C1BQ96P26 610 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 RIOK1Q9BRS2 568 aaKnown RBP13.88□□□□□ -0.19
SCN1B-202ENST00000415950 MAGEF1Q9HAY2 307 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 PSD3Q9NYI0 1048 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 DCTN4Q9UJW0 460 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 STK24Q9Y6E0 443 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 TMEM191BP0C7N4 346 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 PSMC2P35998 433 aaKnown RBP13.88□□□□□ -0.19
SCN1B-202ENST00000415950 BASP1P80723 227 aaKnown RBP13.88□□□□□ -0.19
SCN1B-202ENST00000415950 CERKLQ49MI3 558 aaPredicted RBP13.88□□□□□ -0.19
SCN1B-202ENST00000415950 DGKHQ86XP1 1220 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 TEKT1Q969V4 418 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 DIP2CQ9Y2E4 1556 aa13.88□□□□□ -0.19
SCN1B-202ENST00000415950 SLC9A1P19634 815 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 SSTR3P32745 418 aaPredicted RBP13.87□□□□□ -0.19
SCN1B-202ENST00000415950 ALX1Q15699 326 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 C10orf76Q5T2E6 689 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 CDAN1Q8IWY9 1227 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 FBXO41Q8TF61 875 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 PITPNM3Q9BZ71 974 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 MINPP1Q9UNW1 487 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 CFLARO15519 480 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 MYL1P05976 194 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 MSH2P43246 934 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 GCLMP48507 274 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 DLGAP5Q15398 846 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 SMAD1Q15797 465 aaKnown RBP13.87□□□□□ -0.19
SCN1B-202ENST00000415950 ARHGEF18Q6ZSZ5 1173 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 TBC1D22AQ8WUA7 517 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 EXOC1LA0A1B0GW35 172 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 MYMKA6NI61 221 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms