RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 CETPP11597 493 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 GAS2L3Q86XJ1 694 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 C7orf25Q9BPX7 421 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 GOLGA8KD6RF30 607 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 STXBP3O00186 592 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 RFC5P40937 340 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 SLC12A2P55011 1212 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 MAP7D1Q3KQU3 841 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 FKBP1CQ5VVH2 108 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 FAM163AQ96GL9 167 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-205ENST00000414879 DESI2Q9BSY9 194 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 GCOM2Q9BZD3 368 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-205ENST00000414879 JPH1Q9HDC5 661 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-205ENST00000414879 MED4Q9NPJ6 270 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 ATF2P15336 505 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 ADCY8P40145 1251 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 RASSF7Q02833 373 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 R3HDM1Q15032 1099 aaKnown RBP12.94□□□□□ -0.34
PTPRF-205ENST00000414879 SCYL2Q6P3W7 929 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 C10orf67Q8IYJ2 551 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 SMYD4Q8IYR2 804 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-205ENST00000414879 BEST2Q8NFU1 509 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 PLCD4Q9BRC7 762 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 LXNQ9BS40 222 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 NHEJ1Q9H9Q4 299 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-205ENST00000414879 LRRC4Q9HBW1 653 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 PRR12Q9ULL5 1215 aa12.94□□□□□ -0.34
PTPRF-205ENST00000414879 GMPSP49915 693 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-205ENST00000414879 STAG2Q8N3U4 1231 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 TRIM62Q9BVG3 475 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 PITPNM2Q9BZ72 1349 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 GAS2O43903 313 aaKnown RBP12.93□□□□□ -0.34
PTPRF-205ENST00000414879 RPLP2P05387 115 aaKnown RBP12.93□□□□□ -0.34
PTPRF-205ENST00000414879 HMGCS2P54868 508 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 RNASELQ05823 741 aaKnown RBP12.93□□□□□ -0.34
PTPRF-205ENST00000414879 GABPB1Q06547 395 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-205ENST00000414879 MXD4Q14582 209 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-205ENST00000414879 HHATQ5VTY9 493 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 PALM2Q8IXS6 379 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 SCYL3Q8IZE3 742 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 GABBR1Q9UBS5 961 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 OATP04181 439 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 KRT10P13645 584 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 ANTXR2P58335 489 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 ELF2Q15723 593 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 RNF10Q8N5U6 811 aaKnown RBP12.93□□□□□ -0.34
PTPRF-205ENST00000414879 TMEM35BQ8NCS4 154 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 CDKL2Q92772 493 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 PCIF1Q9H4Z3 704 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 ABCC6O95255 1503 aa12.93□□□□□ -0.34
PTPRF-205ENST00000414879 CNTNAP5Q8WYK1 1306 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 FAM196BA6NMK8 535 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 CCDC188H7C350 402 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 GFPT2O94808 682 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 ARL4AP40617 200 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 FXR2P51116 673 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTPRF-205ENST00000414879 RNASE9P60153 205 aaKnown RBP12.92□□□□□ -0.34
PTPRF-205ENST00000414879 MTMR2Q13614 643 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 RGPD8O14715 1765 aaPredicted RBP12.92□□□□□ -0.34
PTPRF-205ENST00000414879 ANO9A1A5B4 782 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 I3L4J1 428 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 SORBS3O60504 671 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 CALB1P05937 261 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 THEM5Q8N1Q8 247 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 GMCL1Q96IK5 515 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 KRT12Q99456 494 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 SMARCAD1Q9H4L7 1026 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 HOXC6P09630 235 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 SRGAP2CP0DJJ0 459 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 CIITAP33076 1130 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 CACNB1Q02641 598 aaPredicted RBP12.92□□□□□ -0.34
PTPRF-205ENST00000414879 NLRP4Q96MN2 994 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 TMEM260Q9NX78 707 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 SLIT3O75094 1523 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 POTEB3A0JP26 581 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 SMIM23A6NLE4 172 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 POTECB2RU33 542 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 MYBL1P10243 752 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 EIF4A3P38919 411 aaKnown RBP12.92□□□□□ -0.34
PTPRF-205ENST00000414879 UAP1Q16222 522 aaPredicted RBP12.92□□□□□ -0.34
PTPRF-205ENST00000414879 POTEBQ6S5H4 581 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 EEPD1Q7L9B9 569 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 SESTD1Q86VW0 696 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 GMCL1P1Q8NEA9 526 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 GPRASP2Q96D09 838 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 C17orf75Q9HAS0 396 aa12.92□□□□□ -0.34
PTPRF-205ENST00000414879 SALL3Q9BXA9 1300 aa12.91□□□□□ -0.34
PTPRF-205ENST00000414879 E9PMD0 336 aa12.91□□□□□ -0.34
PTPRF-205ENST00000414879 BUB1O43683 1085 aa12.91□□□□□ -0.34
PTPRF-205ENST00000414879 EZH2Q15910 746 aaKnown RBP12.91□□□□□ -0.34
PTPRF-205ENST00000414879 ARL13BQ3SXY8 428 aa12.91□□□□□ -0.34
PTPRF-205ENST00000414879 KRT71Q3SY84 523 aa12.91□□□□□ -0.34
PTPRF-205ENST00000414879 KRT39Q6A163 491 aa12.91□□□□□ -0.34
PTPRF-205ENST00000414879 ALKBH5Q6P6C2 394 aaKnown RBP12.91□□□□□ -0.34
PTPRF-205ENST00000414879 TRIM31Q9BZY9 425 aa12.91□□□□□ -0.34
PTPRF-205ENST00000414879 ANKEF1Q9NU02 776 aa12.91□□□□□ -0.34
PTPRF-205ENST00000414879 ZNF148Q9UQR1 794 aa12.91□□□□□ -0.34
PTPRF-205ENST00000414879 RGS16O15492 202 aaPredicted RBP12.91□□□□□ -0.34
PTPRF-205ENST00000414879 MYL3P08590 195 aa12.91□□□□□ -0.34
PTPRF-205ENST00000414879 KRT15P19012 456 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms