RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ERICH1Q86X53 443 aa18.64■□□□□ 0.58
PHRF1-202ENST00000413872 CACNA2D3Q8IZS8 1091 aa18.64■□□□□ 0.58
PHRF1-202ENST00000413872 OR6B3Q8NGW1 331 aa18.64■□□□□ 0.58
PHRF1-202ENST00000413872 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.64■□□□□ 0.581e-6■■■■□ 21.9
PHRF1-202ENST00000413872 PPP1R13BQ96KQ4 1090 aa18.64■□□□□ 0.58
PHRF1-202ENST00000413872 TEX13BQ9BXU2 312 aa18.64■□□□□ 0.58
PHRF1-202ENST00000413872 USP32Q8NFA0 1604 aa18.64■□□□□ 0.57
PHRF1-202ENST00000413872 NR3C1P04150 777 aa18.64■□□□□ 0.57
PHRF1-202ENST00000413872 TWF2Q6IBS0 349 aaKnown RBP18.64■□□□□ 0.57
PHRF1-202ENST00000413872 ANKRD42Q8N9B4 389 aa18.64■□□□□ 0.57
PHRF1-202ENST00000413872 GABBR1Q9UBS5 961 aa18.64■□□□□ 0.57
PHRF1-202ENST00000413872 TECPR2O15040 1411 aa18.64■□□□□ 0.57
PHRF1-202ENST00000413872 ECEL1O95672 775 aa18.64■□□□□ 0.57
PHRF1-202ENST00000413872 CCNYQ8ND76 341 aa18.64■□□□□ 0.57
PHRF1-202ENST00000413872 CFAP57Q96MR6 1250 aa18.64■□□□□ 0.57
PHRF1-202ENST00000413872 PPP1R16BQ96T49 567 aa18.64■□□□□ 0.57
PHRF1-202ENST00000413872 TIPINQ9BVW5 301 aa18.64■□□□□ 0.57
PHRF1-202ENST00000413872 NHEJ1Q9H9Q4 299 aaPredicted RBP18.64■□□□□ 0.57
PHRF1-202ENST00000413872 PCDHA10Q9Y5I2 948 aa18.64■□□□□ 0.57
PHRF1-202ENST00000413872 CDC27P30260 824 aa18.64■□□□□ 0.57
PHRF1-202ENST00000413872 KRT31Q15323 416 aa18.64■□□□□ 0.57
PHRF1-202ENST00000413872 GINM1Q9NU53 330 aa18.64■□□□□ 0.57
PHRF1-202ENST00000413872 HMGCS2P54868 508 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 ZBED2Q9BTP6 218 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 GCOM2Q9BZD3 368 aaPredicted RBP18.63■□□□□ 0.57
PHRF1-202ENST00000413872 INHBAP08476 426 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 CEP57Q86XR8 500 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 TMEM35BQ8NCS4 154 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 F8W8V4 182 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 CDC42EP1Q00587 391 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 GUCY2DQ02846 1103 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 R3HDM1Q15032 1099 aaKnown RBP18.63■□□□□ 0.57
PHRF1-202ENST00000413872 NAA35Q5VZE5 725 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 KCTD6Q8NC69 237 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 URGCPQ8TCY9 931 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 SLC26A4O43511 780 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 HUS1O60921 280 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 SWSAP1Q6NVH7 229 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 SCYL1Q96KG9 808 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 SPATA33Q96N06 139 aa18.63■□□□□ 0.57
PHRF1-202ENST00000413872 ESYT2A0FGR8 921 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 TBXAS1P24557 533 aaPredicted RBP18.62■□□□□ 0.57
PHRF1-202ENST00000413872 AP3M2P53677 418 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 ITPK1Q13572 414 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 MRPL4Q9BYD3 311 aaKnown RBP18.62■□□□□ 0.57
PHRF1-202ENST00000413872 MED4Q9NPJ6 270 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 ZNF70Q9UC06 446 aaPredicted RBP18.62■□□□□ 0.57
PHRF1-202ENST00000413872 CEP170BQ9Y4F5 1589 aaPredicted RBP18.62■□□□□ 0.57
PHRF1-202ENST00000413872 NDUFA10O95299 355 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 OAS2P29728 719 aaKnown RBP18.62■□□□□ 0.57
PHRF1-202ENST00000413872 HDLBPQ00341 1268 aaKnown RBP18.62■□□□□ 0.57
PHRF1-202ENST00000413872 GABPB1Q06547 395 aaPredicted RBP18.62■□□□□ 0.57
PHRF1-202ENST00000413872 ZNF543Q08ER8 600 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 CEP55Q53EZ4 464 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 ALKBH5Q6P6C2 394 aaKnown RBP18.62■□□□□ 0.57
PHRF1-202ENST00000413872 FBXO33Q7Z6M2 555 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 DENND3A2RUS2 1198 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 COASYQ13057 564 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 ARHGEF18Q6ZSZ5 1173 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 CALN1Q9BXU9 219 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 VCXQ9H320 206 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 PLEKHA4Q9H4M7 779 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 CEP72Q9P209 647 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 SFI1A8K8P3 1242 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 E9PMD0 336 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 S100BP04271 92 aaPredicted RBP18.62■□□□□ 0.57
PHRF1-202ENST00000413872 KNOP1Q1ED39 458 aaKnown RBP18.62■□□□□ 0.57
PHRF1-202ENST00000413872 SCARA5Q6ZMJ2 495 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 ZNF280CQ8ND82 737 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 TUFT1Q9NNX1 390 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 TMEM260Q9NX78 707 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 KLHL14Q9P2G3 628 aa18.62■□□□□ 0.57
PHRF1-202ENST00000413872 TNPO2O14787 897 aaKnown RBP18.61■□□□□ 0.57
PHRF1-202ENST00000413872 ACTN1P12814 892 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 PDE1BQ01064 536 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 TSPY1Q01534 308 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 PDIA5Q14554 519 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 OXER1Q8TDS5 423 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 KCNH4Q9UQ05 1017 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 GDAQ9Y2T3 454 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 CEMIPQ8WUJ3 1361 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 KIAA0391O15091 583 aaKnown RBP18.61■□□□□ 0.57
PHRF1-202ENST00000413872 EFNA5P52803 228 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 LXNQ9BS40 222 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 SLC9A2Q9UBY0 812 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 POTEB3A0JP26 581 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 POTECB2RU33 542 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 HEXIM1O94992 359 aaKnown RBP18.61■□□□□ 0.57
PHRF1-202ENST00000413872 GPC3P51654 580 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 SNAPC2Q13487 334 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 POTEBQ6S5H4 581 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 C4orf50Q6ZRC1 276 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 LRRD1A4D1F6 860 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 KPNA2P52292 529 aaKnown RBP18.61■□□□□ 0.57
PHRF1-202ENST00000413872 ASPHQ12797 758 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 SLC15A2Q16348 729 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 ZNF699Q32M78 642 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 NAALADL2Q58DX5 795 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 AGBL3Q8NEM8 1001 aa18.61■□□□□ 0.57
PHRF1-202ENST00000413872 STRIP2Q9ULQ0 834 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms